RNA–Protein interactions for RNA: ENST00000596708.1

CHMP2A-202, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-202ENST00000596708 TMX1Q9H3N1 280 aa12.02□□□□□ -0.49
CHMP2A-202ENST00000596708 ZNF302Q9NR11 478 aa12.02□□□□□ -0.49
CHMP2A-202ENST00000596708 BRPF3Q9ULD4 1205 aa12.02□□□□□ -0.49
CHMP2A-202ENST00000596708 KDM3AQ9Y4C1 1321 aa12.02□□□□□ -0.49
CHMP2A-202ENST00000596708 TECTAO75443 2155 aa12.02□□□□□ -0.49
CHMP2A-202ENST00000596708 ZNF318Q5VUA4 2279 aa12.01□□□□□ -0.49
CHMP2A-202ENST00000596708 IGKV6D-21A0A0A0MT36 114 aa12.01□□□□□ -0.49
CHMP2A-202ENST00000596708 KLF18A0A0U1RQI7 1052 aa12.01□□□□□ -0.49
CHMP2A-202ENST00000596708 DENND3A2RUS2 1198 aa12.01□□□□□ -0.49
CHMP2A-202ENST00000596708 SREBF1P36956 1147 aa12.01□□□□□ -0.49
CHMP2A-202ENST00000596708 NRIP1P48552 1158 aa12.01□□□□□ -0.49
CHMP2A-202ENST00000596708 SARSP49591 514 aaKnown RBP12.01□□□□□ -0.49
CHMP2A-202ENST00000596708 CLK2P49760 499 aaKnown RBP12.01□□□□□ -0.49
CHMP2A-202ENST00000596708 FGD1P98174 961 aa12.01□□□□□ -0.49
CHMP2A-202ENST00000596708 EXOSC10Q01780 885 aaKnown RBP12.01□□□□□ -0.49
CHMP2A-202ENST00000596708 ZNF484Q5JVG2 852 aa12.01□□□□□ -0.49
CHMP2A-202ENST00000596708 SWSAP1Q6NVH7 229 aa12.01□□□□□ -0.49
CHMP2A-202ENST00000596708 ADGRD2Q7Z7M1 963 aa12.01□□□□□ -0.49
CHMP2A-202ENST00000596708 ALYREFQ86V81 257 aaKnown RBP12.01□□□□□ -0.49
CHMP2A-202ENST00000596708 TEX2Q8IWB9 1127 aa12.01□□□□□ -0.49
CHMP2A-202ENST00000596708 CRIPAKQ8N1N5 446 aa12.01□□□□□ -0.49
CHMP2A-202ENST00000596708 ATP8B4Q8TF62 1192 aa12.01□□□□□ -0.49
CHMP2A-202ENST00000596708 PPP1R16BQ96T49 567 aa12.01□□□□□ -0.49
CHMP2A-202ENST00000596708 CDHR5Q9HBB8 845 aa12.01□□□□□ -0.49
CHMP2A-202ENST00000596708 AAASQ9NRG9 546 aa12.01□□□□□ -0.49
CHMP2A-202ENST00000596708 RNF216Q9NWF9 866 aaPredicted RBP12.01□□□□□ -0.49
CHMP2A-202ENST00000596708 BARHL2Q9NY43 387 aa12.01□□□□□ -0.49
CHMP2A-202ENST00000596708 NOC2LQ9Y3T9 749 aaKnown RBP12.01□□□□□ -0.49
CHMP2A-202ENST00000596708 PCDHB12Q9Y5F1 795 aa12.01□□□□□ -0.49
CHMP2A-202ENST00000596708 TBKBP1A7MCY6 615 aa12□□□□□ -0.49
CHMP2A-202ENST00000596708 GPR182O15218 404 aa12□□□□□ -0.49
CHMP2A-202ENST00000596708 CCNE2O96020 404 aa12□□□□□ -0.49
CHMP2A-202ENST00000596708 CDC27P30260 824 aa12□□□□□ -0.49
CHMP2A-202ENST00000596708 FUT2Q10981 343 aa12□□□□□ -0.49
CHMP2A-202ENST00000596708 ADCK5Q3MIX3 580 aa12□□□□□ -0.49
CHMP2A-202ENST00000596708 NIPA1Q7RTP0 329 aa12□□□□□ -0.49
CHMP2A-202ENST00000596708 RNF135Q8IUD6 432 aa12□□□□□ -0.49
CHMP2A-202ENST00000596708 CCDC60Q8IWA6 550 aaPredicted RBP12□□□□□ -0.49
CHMP2A-202ENST00000596708 KIAA0319LQ8IZA0 1049 aa12□□□□□ -0.49
CHMP2A-202ENST00000596708 EFHBQ8N7U6 833 aa12□□□□□ -0.49
CHMP2A-202ENST00000596708 ADAM2Q99965 735 aa12□□□□□ -0.49
CHMP2A-202ENST00000596708 ERVK-5Q9HDB9 667 aa12□□□□□ -0.49
CHMP2A-202ENST00000596708 C1orf112Q9NSG2 853 aa12□□□□□ -0.49
CHMP2A-202ENST00000596708 TCEAL9Q9UHQ7 104 aa12□□□□□ -0.49
CHMP2A-202ENST00000596708 MUTYHQ9UIF7 546 aa12□□□□□ -0.49
CHMP2A-202ENST00000596708 ST3GAL5Q9UNP4 418 aa12□□□□□ -0.49
CHMP2A-202ENST00000596708 COL1A2P08123 1366 aa12□□□□□ -0.49
CHMP2A-202ENST00000596708 FAM86B1E9PN63 330 aa11.99□□□□□ -0.49
CHMP2A-202ENST00000596708 IPO5O00410 1097 aaKnown RBP11.99□□□□□ -0.49
CHMP2A-202ENST00000596708 MGEA5O60502 916 aa11.99□□□□□ -0.49
CHMP2A-202ENST00000596708 FAM86B2P0C5J1 330 aa11.99□□□□□ -0.49
CHMP2A-202ENST00000596708 ADD1P35611 737 aaKnown RBP11.99□□□□□ -0.49
CHMP2A-202ENST00000596708 KRT32Q14532 448 aa11.99□□□□□ -0.49
CHMP2A-202ENST00000596708 PFKFB3Q16875 520 aaPredicted RBP11.99□□□□□ -0.49
CHMP2A-202ENST00000596708 FAM102BQ5T8I3 360 aa11.99□□□□□ -0.49
CHMP2A-202ENST00000596708 SLC24A5Q71RS6 500 aa11.99□□□□□ -0.49
CHMP2A-202ENST00000596708 THNSL1Q8IYQ7 743 aa11.99□□□□□ -0.49
CHMP2A-202ENST00000596708 RASEFQ8IZ41 740 aa11.99□□□□□ -0.49
CHMP2A-202ENST00000596708 METTL13Q8N6R0 699 aa11.99□□□□□ -0.49
CHMP2A-202ENST00000596708 TMEM40Q8WWA1 233 aa11.99□□□□□ -0.49
CHMP2A-202ENST00000596708 BBXQ8WY36 941 aaPredicted RBP11.99□□□□□ -0.49
CHMP2A-202ENST00000596708 MSLNLQ96KJ4 702 aa11.99□□□□□ -0.49
CHMP2A-202ENST00000596708 OSMRQ99650 979 aa11.99□□□□□ -0.49
CHMP2A-202ENST00000596708 ZNF577Q9BSK1 485 aa11.99□□□□□ -0.49
CHMP2A-202ENST00000596708 TLE6Q9H808 572 aa11.99□□□□□ -0.49
CHMP2A-202ENST00000596708 ATP6V0A4Q9HBG4 840 aa11.99□□□□□ -0.49
CHMP2A-202ENST00000596708 C6orf50Q9HD87 102 aa11.99□□□□□ -0.49
CHMP2A-202ENST00000596708 RGS18Q9NS28 235 aa11.99□□□□□ -0.49
CHMP2A-202ENST00000596708 FAM217BQ9NTX9 383 aaPredicted RBP11.99□□□□□ -0.49
CHMP2A-202ENST00000596708 CLEC1BQ9P126 229 aa11.99□□□□□ -0.49
CHMP2A-202ENST00000596708 CCDC196A0A1B0GTZ2 297 aa11.98□□□□□ -0.49
CHMP2A-202ENST00000596708 C9IYK1 514 aa11.98□□□□□ -0.49
CHMP2A-202ENST00000596708 PER2O15055 1255 aa11.98□□□□□ -0.49
CHMP2A-202ENST00000596708 DHX15O43143 795 aaKnown RBP11.98□□□□□ -0.49
CHMP2A-202ENST00000596708 EYA4O95677 639 aa11.98□□□□□ -0.49
CHMP2A-202ENST00000596708 CYP3A4P08684 503 aa11.98□□□□□ -0.49
CHMP2A-202ENST00000596708 ATP4AP20648 1035 aa11.98□□□□□ -0.49
CHMP2A-202ENST00000596708 METAP2P50579 478 aaKnown RBP eCLIP11.98□□□□□ -0.49
CHMP2A-202ENST00000596708 CRYBB1P53674 252 aaPredicted RBP11.98□□□□□ -0.49
CHMP2A-202ENST00000596708 KIZQ2M2Z5 673 aa11.98□□□□□ -0.49
CHMP2A-202ENST00000596708 TSGA10IPQ3SY00 556 aa11.98□□□□□ -0.49
CHMP2A-202ENST00000596708 BMP2KLQ5H9B9 411 aa11.98□□□□□ -0.49
CHMP2A-202ENST00000596708 FAM43BQ6ZT52 329 aaPredicted RBP11.98□□□□□ -0.49
CHMP2A-202ENST00000596708 HFE2Q6ZVN8 426 aa11.98□□□□□ -0.49
CHMP2A-202ENST00000596708 SKAP1Q86WV1 359 aa11.98□□□□□ -0.49
CHMP2A-202ENST00000596708 CCDC12Q8WUD4 166 aaPredicted RBP11.98□□□□□ -0.49
CHMP2A-202ENST00000596708 MFSD14AQ96MC6 490 aa11.98□□□□□ -0.49
CHMP2A-202ENST00000596708 TLR9Q9NR96 1032 aa11.98□□□□□ -0.49
CHMP2A-202ENST00000596708 TBC1D22BQ9NU19 505 aa11.98□□□□□ -0.49
CHMP2A-202ENST00000596708 TYW1Q9NV66 732 aaKnown RBP11.98□□□□□ -0.49
CHMP2A-202ENST00000596708 GABBR1Q9UBS5 961 aa11.98□□□□□ -0.49
CHMP2A-202ENST00000596708 BARX2Q9UMQ3 279 aaPredicted RBP11.98□□□□□ -0.49
CHMP2A-202ENST00000596708 SAMM50Q9Y512 469 aa11.98□□□□□ -0.49
CHMP2A-202ENST00000596708 PCDHGC5Q9Y5F6 944 aa11.98□□□□□ -0.49
CHMP2A-202ENST00000596708 C5orf42Q9H799 3197 aa11.98□□□□□ -0.49
CHMP2A-202ENST00000596708 IGLV3-22A0A075B6J6 115 aa11.97□□□□□ -0.49
CHMP2A-202ENST00000596708 ZBTB42B2RXF5 422 aa11.97□□□□□ -0.49
CHMP2A-202ENST00000596708 FGF18O76093 207 aa11.97□□□□□ -0.49
CHMP2A-202ENST00000596708 VTNP04004 478 aa11.97□□□□□ -0.49
CHMP2A-202ENST00000596708 PSAPP07602 524 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms