RNA–Protein interactions for RNA: ENST00000594504.5

UPF1-203, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 3

Gene UPF1, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-203ENST00000594504 CCT2P78371 535 aaKnown RBP14.18□□□□□ -0.14
UPF1-203ENST00000594504 KRT76Q01546 638 aa14.18□□□□□ -0.14
UPF1-203ENST00000594504 PAK2Q13177 524 aa14.18□□□□□ -0.14
UPF1-203ENST00000594504 AP3B2Q13367 1082 aa14.18□□□□□ -0.14
UPF1-203ENST00000594504 NTRK3Q16288 839 aa14.18□□□□□ -0.14
UPF1-203ENST00000594504 PKN1Q16512 942 aa14.18□□□□□ -0.14
UPF1-203ENST00000594504 PFKFB3Q16875 520 aaPredicted RBP14.18□□□□□ -0.14
UPF1-203ENST00000594504 TNPO1Q92973 898 aaKnown RBP14.18□□□□□ -0.14
UPF1-203ENST00000594504 C11orf84Q9BUA3 381 aaPredicted RBP14.18□□□□□ -0.14
UPF1-203ENST00000594504 NCOA5Q9HCD5 579 aaKnown RBP14.18□□□□□ -0.14
UPF1-203ENST00000594504 ZNF302Q9NR11 478 aa14.18□□□□□ -0.14
UPF1-203ENST00000594504 PLAGL2Q9UPG8 496 aa14.18□□□□□ -0.14
UPF1-203ENST00000594504 NOC2LQ9Y3T9 749 aaKnown RBP14.18□□□□□ -0.14
UPF1-203ENST00000594504 SQORQ9Y6N5 450 aa14.18□□□□□ -0.14
UPF1-203ENST00000594504 IGSF9BQ9UPX0 1349 aa14.17□□□□□ -0.14
UPF1-203ENST00000594504 IGLV3-22A0A075B6J6 115 aa14.17□□□□□ -0.14
UPF1-203ENST00000594504 CPLX1O14810 134 aa14.17□□□□□ -0.14
UPF1-203ENST00000594504 PRPF3O43395 683 aaKnown RBP14.17□□□□□ -0.14
UPF1-203ENST00000594504 HBP1O60381 514 aa14.17□□□□□ -0.14
UPF1-203ENST00000594504 GPR37L1O60883 481 aa14.17□□□□□ -0.14
UPF1-203ENST00000594504 SCG2P13521 617 aa14.17□□□□□ -0.14
UPF1-203ENST00000594504 IRS1P35568 1242 aa14.17□□□□□ -0.14
UPF1-203ENST00000594504 STK3Q13188 491 aa14.17□□□□□ -0.14
UPF1-203ENST00000594504 COL19A1Q14993 1142 aa14.17□□□□□ -0.14
UPF1-203ENST00000594504 CPLX2Q6PUV4 134 aaKnown RBP14.17□□□□□ -0.14
UPF1-203ENST00000594504 ADGRD2Q7Z7M1 963 aa14.17□□□□□ -0.14
UPF1-203ENST00000594504 KIAA0319LQ8IZA0 1049 aa14.17□□□□□ -0.14
UPF1-203ENST00000594504 NME8Q8N427 588 aa14.17□□□□□ -0.14
UPF1-203ENST00000594504 SPPL3Q8TCT6 385 aa14.17□□□□□ -0.14
UPF1-203ENST00000594504 RASGRP4Q8TDF6 673 aa14.17□□□□□ -0.14
UPF1-203ENST00000594504 TMEM40Q8WWA1 233 aa14.17□□□□□ -0.14
UPF1-203ENST00000594504 CRYGNQ8WXF5 182 aa14.17□□□□□ -0.14
UPF1-203ENST00000594504 PHKBQ93100 1093 aa14.17□□□□□ -0.14
UPF1-203ENST00000594504 FAM122AQ96E09 287 aa14.17□□□□□ -0.14
UPF1-203ENST00000594504 KIF2CQ99661 725 aa14.17□□□□□ -0.14
UPF1-203ENST00000594504 FTHL17Q9BXU8 183 aa14.17□□□□□ -0.14
UPF1-203ENST00000594504 RNF26Q9BY78 433 aaPredicted RBP14.17□□□□□ -0.14
UPF1-203ENST00000594504 SLKQ9H2G2 1235 aaPredicted RBP14.17□□□□□ -0.14
UPF1-203ENST00000594504 TPCN1Q9ULQ1 816 aa14.17□□□□□ -0.14
UPF1-203ENST00000594504 RWDD3Q9Y3V2 267 aa14.17□□□□□ -0.14
UPF1-203ENST00000594504 TTC28Q96AY4 2481 aa14.16□□□□□ -0.14
UPF1-203ENST00000594504 ZBTB42B2RXF5 422 aa14.16□□□□□ -0.14
UPF1-203ENST00000594504 PFKFB2O60825 505 aa14.16□□□□□ -0.14
UPF1-203ENST00000594504 ITGB1P05556 798 aa14.16□□□□□ -0.14
UPF1-203ENST00000594504 CYP3A4P08684 503 aa14.16□□□□□ -0.14
UPF1-203ENST00000594504 PLA2G5P39877 138 aa14.16□□□□□ -0.14
UPF1-203ENST00000594504 AKAP17AQ02040 695 aaKnown RBP14.16□□□□□ -0.14
UPF1-203ENST00000594504 CTC1Q2NKJ3 1217 aa14.16□□□□□ -0.14
UPF1-203ENST00000594504 PUS10Q3MIT2 529 aaKnown RBP14.16□□□□□ -0.14
UPF1-203ENST00000594504 FAM160B1Q5W0V3 765 aa14.16□□□□□ -0.14
UPF1-203ENST00000594504 PDXDC2PQ6P474 469 aa14.16□□□□□ -0.14
UPF1-203ENST00000594504 NIPA1Q7RTP0 329 aa14.16□□□□□ -0.14
UPF1-203ENST00000594504 NPAS4Q8IUM7 802 aa14.16□□□□□ -0.14
UPF1-203ENST00000594504 TEX2Q8IWB9 1127 aa14.16□□□□□ -0.14
UPF1-203ENST00000594504 CMTR2Q8IYT2 770 aaKnown RBP14.16□□□□□ -0.14
UPF1-203ENST00000594504 KLHL23Q8NBE8 558 aa14.16□□□□□ -0.14
UPF1-203ENST00000594504 ATP8B4Q8TF62 1192 aa14.16□□□□□ -0.14
UPF1-203ENST00000594504 ZNF577Q9BSK1 485 aa14.16□□□□□ -0.14
UPF1-203ENST00000594504 BACH2Q9BYV9 841 aa14.16□□□□□ -0.14
UPF1-203ENST00000594504 LMAN2LQ9H0V9 348 aa14.16□□□□□ -0.14
UPF1-203ENST00000594504 ERVK-5Q9HDB9 667 aa14.16□□□□□ -0.14
UPF1-203ENST00000594504 LRFN2Q9ULH4 789 aa14.16□□□□□ -0.14
UPF1-203ENST00000594504 PCDHGC5Q9Y5F6 944 aa14.16□□□□□ -0.14
UPF1-203ENST00000594504 KDM3AQ9Y4C1 1321 aa14.15□□□□□ -0.14
UPF1-203ENST00000594504 MYO7AQ13402 2215 aa14.15□□□□□ -0.14
UPF1-203ENST00000594504 IPO5O00410 1097 aaKnown RBP14.15□□□□□ -0.14
UPF1-203ENST00000594504 EDIL3O43854 480 aa14.15□□□□□ -0.14
UPF1-203ENST00000594504 RPS6KA5O75582 802 aa14.15□□□□□ -0.14
UPF1-203ENST00000594504 MMP1P03956 469 aa14.15□□□□□ -0.14
UPF1-203ENST00000594504 RPLP2P05387 115 aaKnown RBP14.15□□□□□ -0.14
UPF1-203ENST00000594504 STAG3L1P0CL83 205 aa14.15□□□□□ -0.14
UPF1-203ENST00000594504 SLC26A2P50443 739 aa14.15□□□□□ -0.14
UPF1-203ENST00000594504 SCRN1Q12765 414 aa14.15□□□□□ -0.14
UPF1-203ENST00000594504 RABEP1Q15276 862 aa14.15□□□□□ -0.14
UPF1-203ENST00000594504 FAM102BQ5T8I3 360 aa14.15□□□□□ -0.14
UPF1-203ENST00000594504 MIS18BP1Q6P0N0 1132 aa14.15□□□□□ -0.14
UPF1-203ENST00000594504 CKAP2LQ8IYA6 745 aa14.15□□□□□ -0.14
UPF1-203ENST00000594504 TRIM22Q8IYM9 498 aa14.15□□□□□ -0.14
UPF1-203ENST00000594504 POF1BQ8WVV4 589 aa14.15□□□□□ -0.14
UPF1-203ENST00000594504 TBC1D32Q96NH3 1257 aa14.15□□□□□ -0.14
UPF1-203ENST00000594504 ADAM2Q99965 735 aa14.15□□□□□ -0.14
UPF1-203ENST00000594504 PLVAPQ9BX97 442 aa14.15□□□□□ -0.14
UPF1-203ENST00000594504 SLC26A6Q9BXS9 759 aa14.15□□□□□ -0.14
UPF1-203ENST00000594504 ZMYND12Q9H0C1 365 aa14.15□□□□□ -0.14
UPF1-203ENST00000594504 GLT8D2Q9H1C3 349 aa14.15□□□□□ -0.14
UPF1-203ENST00000594504 C6orf50Q9HD87 102 aa14.15□□□□□ -0.14
UPF1-203ENST00000594504 HCSTQ9UBK5 93 aa14.15□□□□□ -0.14
UPF1-203ENST00000594504 ST3GAL5Q9UNP4 418 aa14.15□□□□□ -0.14
UPF1-203ENST00000594504 TRANK1O15050 2925 aa14.15□□□□□ -0.14
UPF1-203ENST00000594504 PLXNA4Q9HCM2 1894 aa14.14□□□□□ -0.15
UPF1-203ENST00000594504 MBTPS2O43462 519 aa14.14□□□□□ -0.15
UPF1-203ENST00000594504 TBX10O75333 385 aa14.14□□□□□ -0.15
UPF1-203ENST00000594504 CDKL5O76039 1030 aa14.14□□□□□ -0.15
UPF1-203ENST00000594504 VTNP04004 478 aa14.14□□□□□ -0.15
UPF1-203ENST00000594504 SARSP49591 514 aaKnown RBP14.14□□□□□ -0.15
UPF1-203ENST00000594504 ZP2Q05996 745 aa14.14□□□□□ -0.15
UPF1-203ENST00000594504 SSRP1Q08945 709 aaKnown RBP14.14□□□□□ -0.15
UPF1-203ENST00000594504 ADAM15Q13444 863 aa14.14□□□□□ -0.15
UPF1-203ENST00000594504 KIZQ2M2Z5 673 aa14.14□□□□□ -0.15
UPF1-203ENST00000594504 PRR16Q569H4 304 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms