RNA–Protein interactions for RNA: ENST00000591519.1

VPS4B-207, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 2 BASIC

Gene VPS4B, Length 551 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-207ENST00000591519 MARK3P27448 753 aa11.87□□□□□ -0.51
VPS4B-207ENST00000591519 SREBF1P36956 1147 aa11.87□□□□□ -0.51
VPS4B-207ENST00000591519 SLC26A2P50443 739 aa11.87□□□□□ -0.51
VPS4B-207ENST00000591519 STAT5BP51692 787 aa11.87□□□□□ -0.51
VPS4B-207ENST00000591519 ADCY7P51828 1080 aa11.87□□□□□ -0.51
VPS4B-207ENST00000591519 NAPAP54920 295 aa11.87□□□□□ -0.51
VPS4B-207ENST00000591519 ACTR2P61160 394 aa11.87□□□□□ -0.51
VPS4B-207ENST00000591519 AP3B2Q13367 1082 aa11.87□□□□□ -0.51
VPS4B-207ENST00000591519 GPM6BQ13491 265 aa11.87□□□□□ -0.51
VPS4B-207ENST00000591519 RTN1Q16799 776 aa11.87□□□□□ -0.51
VPS4B-207ENST00000591519 TSHZ1Q6ZSZ6 1077 aa11.87□□□□□ -0.51
VPS4B-207ENST00000591519 NME8Q8N427 588 aa11.87□□□□□ -0.51
VPS4B-207ENST00000591519 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.87□□□□□ -0.51
VPS4B-207ENST00000591519 NEK9Q8TD19 979 aa11.87□□□□□ -0.51
VPS4B-207ENST00000591519 CRYGNQ8WXF5 182 aa11.87□□□□□ -0.51
VPS4B-207ENST00000591519 CLP1Q92989 425 aaKnown RBP11.87□□□□□ -0.51
VPS4B-207ENST00000591519 SDF4Q9BRK5 362 aa11.87□□□□□ -0.51
VPS4B-207ENST00000591519 IRX2Q9BZI1 471 aaPredicted RBP11.87□□□□□ -0.51
VPS4B-207ENST00000591519 AZI2Q9H6S1 392 aa11.87□□□□□ -0.51
VPS4B-207ENST00000591519 AGO4Q9HCK5 861 aaKnown RBP11.87□□□□□ -0.51
VPS4B-207ENST00000591519 CDY2AQ9Y6F7 541 aa11.87□□□□□ -0.51
VPS4B-207ENST00000591519 DGKIO75912 1065 aa11.86□□□□□ -0.51
VPS4B-207ENST00000591519 CYP3A4P08684 503 aa11.86□□□□□ -0.51
VPS4B-207ENST00000591519 CDC27P30260 824 aa11.86□□□□□ -0.51
VPS4B-207ENST00000591519 BMPR1AP36894 532 aa11.86□□□□□ -0.51
VPS4B-207ENST00000591519 MRPS6P82932 125 aaKnown RBP11.86□□□□□ -0.51
VPS4B-207ENST00000591519 ITGB3BPQ13352 177 aaPredicted RBP11.86□□□□□ -0.51
VPS4B-207ENST00000591519 PLCB4Q15147 1175 aa11.86□□□□□ -0.51
VPS4B-207ENST00000591519 PUS10Q3MIT2 529 aaKnown RBP11.86□□□□□ -0.51
VPS4B-207ENST00000591519 TIGD5Q53EQ6 642 aa11.86□□□□□ -0.51
VPS4B-207ENST00000591519 RTN4RL1Q86UN2 441 aaPredicted RBP11.86□□□□□ -0.51
VPS4B-207ENST00000591519 FBXL16Q8N461 479 aa11.86□□□□□ -0.51
VPS4B-207ENST00000591519 FIBCD1Q8N539 461 aa11.86□□□□□ -0.51
VPS4B-207ENST00000591519 BANK1Q8NDB2 785 aa11.86□□□□□ -0.51
VPS4B-207ENST00000591519 TCEANC2Q96MN5 208 aa11.86□□□□□ -0.51
VPS4B-207ENST00000591519 FTHL17Q9BXU8 183 aa11.86□□□□□ -0.51
VPS4B-207ENST00000591519 ANO3Q9BYT9 981 aa11.86□□□□□ -0.51
VPS4B-207ENST00000591519 AGO3Q9H9G7 860 aaKnown RBP11.86□□□□□ -0.51
VPS4B-207ENST00000591519 PKD2L1Q9P0L9 805 aa11.86□□□□□ -0.51
VPS4B-207ENST00000591519 RWDD3Q9Y3V2 267 aa11.86□□□□□ -0.51
VPS4B-207ENST00000591519 KDM3AQ9Y4C1 1321 aa11.86□□□□□ -0.51
VPS4B-207ENST00000591519 RALGAPA2Q2PPJ7 1873 aa11.85□□□□□ -0.51
VPS4B-207ENST00000591519 KLF18A0A0U1RQI7 1052 aa11.85□□□□□ -0.51
VPS4B-207ENST00000591519 CCDC196A0A1B0GTZ2 297 aa11.85□□□□□ -0.51
VPS4B-207ENST00000591519 SMIM35A0A1B0GVV1 85 aa11.85□□□□□ -0.51
VPS4B-207ENST00000591519 ESYT2A0FGR8 921 aa11.85□□□□□ -0.51
VPS4B-207ENST00000591519 DHX15O43143 795 aaKnown RBP11.85□□□□□ -0.51
VPS4B-207ENST00000591519 NCK2O43639 380 aa11.85□□□□□ -0.51
VPS4B-207ENST00000591519 PFKFB3Q16875 520 aaPredicted RBP11.85□□□□□ -0.51
VPS4B-207ENST00000591519 MCTP2Q6DN12 878 aa11.85□□□□□ -0.51
VPS4B-207ENST00000591519 ABHD15Q6UXT9 468 aa11.85□□□□□ -0.51
VPS4B-207ENST00000591519 FAM178BQ8IXR5 827 aa11.85□□□□□ -0.51
VPS4B-207ENST00000591519 PABPC5Q96DU9 382 aaKnown RBP11.85□□□□□ -0.51
VPS4B-207ENST00000591519 CELF4Q9BZC1 486 aaKnown RBP11.85□□□□□ -0.51
VPS4B-207ENST00000591519 LMAN2LQ9H0V9 348 aa11.85□□□□□ -0.51
VPS4B-207ENST00000591519 EPHX3Q9H6B9 360 aa11.85□□□□□ -0.51
VPS4B-207ENST00000591519 CD320Q9NPF0 282 aa11.85□□□□□ -0.51
VPS4B-207ENST00000591519 IGSF9BQ9UPX0 1349 aa11.85□□□□□ -0.51
VPS4B-207ENST00000591519 IGLV3-22A0A075B6J6 115 aa11.84□□□□□ -0.51
VPS4B-207ENST00000591519 GRXCR2A6NFK2 248 aa11.84□□□□□ -0.51
VPS4B-207ENST00000591519 GOLGA8AA7E2F4 631 aa11.84□□□□□ -0.51
VPS4B-207ENST00000591519 GOLGA8BA8MQT2 603 aa11.84□□□□□ -0.51
VPS4B-207ENST00000591519 PI4K2BG5E9Z4 385 aa11.84□□□□□ -0.51
VPS4B-207ENST00000591519 HBP1O60381 514 aa11.84□□□□□ -0.51
VPS4B-207ENST00000591519 CCNE2O96020 404 aa11.84□□□□□ -0.51
VPS4B-207ENST00000591519 KCNA5P22460 613 aa11.84□□□□□ -0.51
VPS4B-207ENST00000591519 ADD1P35611 737 aaKnown RBP11.84□□□□□ -0.51
VPS4B-207ENST00000591519 IGBP1P78318 339 aa11.84□□□□□ -0.51
VPS4B-207ENST00000591519 CTC1Q2NKJ3 1217 aa11.84□□□□□ -0.51
VPS4B-207ENST00000591519 TCEAL5Q5H9L2 206 aa11.84□□□□□ -0.51
VPS4B-207ENST00000591519 MTHFD1LQ6UB35 978 aa11.84□□□□□ -0.51
VPS4B-207ENST00000591519 ZBTB10Q96DT7 871 aa11.84□□□□□ -0.51
VPS4B-207ENST00000591519 PGBD1Q96JS3 809 aa11.84□□□□□ -0.51
VPS4B-207ENST00000591519 C11orf84Q9BUA3 381 aaPredicted RBP11.84□□□□□ -0.51
VPS4B-207ENST00000591519 PLVAPQ9BX97 442 aa11.84□□□□□ -0.51
VPS4B-207ENST00000591519 ZMYND12Q9H0C1 365 aa11.84□□□□□ -0.51
VPS4B-207ENST00000591519 NSUN3Q9H649 340 aaKnown RBP11.84□□□□□ -0.51
VPS4B-207ENST00000591519 TMEM260Q9NX78 707 aa11.84□□□□□ -0.51
VPS4B-207ENST00000591519 PADI3Q9ULW8 664 aa11.84□□□□□ -0.51
VPS4B-207ENST00000591519 ARIH1Q9Y4X5 557 aaPredicted RBP11.84□□□□□ -0.51
VPS4B-207ENST00000591519 TRPV2Q9Y5S1 764 aa11.84□□□□□ -0.51
VPS4B-207ENST00000591519 NLRC5Q86WI3 1866 aa11.84□□□□□ -0.51
VPS4B-207ENST00000591519 ADGRA3Q8IWK6 1321 aa11.84□□□□□ -0.51
VPS4B-207ENST00000591519 MYO7AQ13402 2215 aa11.83□□□□□ -0.52
VPS4B-207ENST00000591519 FAM86B1E9PN63 330 aa11.83□□□□□ -0.52
VPS4B-207ENST00000591519 M0QZ92 97 aa11.83□□□□□ -0.52
VPS4B-207ENST00000591519 PRPF3O43395 683 aaKnown RBP11.83□□□□□ -0.52
VPS4B-207ENST00000591519 GPR37L1O60883 481 aa11.83□□□□□ -0.52
VPS4B-207ENST00000591519 FAM86B2P0C5J1 330 aa11.83□□□□□ -0.52
VPS4B-207ENST00000591519 SCG2P13521 617 aa11.83□□□□□ -0.52
VPS4B-207ENST00000591519 KLRC1P26715 233 aa11.83□□□□□ -0.52
VPS4B-207ENST00000591519 CD52P31358 61 aa11.83□□□□□ -0.52
VPS4B-207ENST00000591519 HSPA4P34932 840 aa11.83□□□□□ -0.52
VPS4B-207ENST00000591519 PKN1Q16512 942 aa11.83□□□□□ -0.52
VPS4B-207ENST00000591519 NAALADL2Q58DX5 795 aa11.83□□□□□ -0.52
VPS4B-207ENST00000591519 PTCRAQ6ISU1 281 aaPredicted RBP11.83□□□□□ -0.52
VPS4B-207ENST00000591519 ATP8B4Q8TF62 1192 aa11.83□□□□□ -0.52
VPS4B-207ENST00000591519 LINC01599Q8WXQ3 324 aa11.83□□□□□ -0.52
VPS4B-207ENST00000591519 P2RX5Q93086 422 aa11.83□□□□□ -0.52
VPS4B-207ENST00000591519 AGXT2Q9BYV1 514 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms