RNA–Protein interactions for RNA: ENST00000588901.5

ATP6V0A1-220, Transcript of ATPase H+ transporting V0 subunit a1, humanhuman

TSL 2

Gene ATP6V0A1, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A1-220ENST00000588901 VAV3Q9UKW4 847 aa20.25■□□□□ 0.83
ATP6V0A1-220ENST00000588901 CEP131Q9UPN4 1083 aa20.25■□□□□ 0.83
ATP6V0A1-220ENST00000588901 SQORQ9Y6N5 450 aa20.25■□□□□ 0.83
ATP6V0A1-220ENST00000588901 M0QZ92 97 aa20.24■□□□□ 0.83
ATP6V0A1-220ENST00000588901 TBX3O15119 743 aa20.24■□□□□ 0.83
ATP6V0A1-220ENST00000588901 CCNT1O60563 726 aaKnown RBP20.24■□□□□ 0.83
ATP6V0A1-220ENST00000588901 TMEM62Q0P6H9 643 aa20.24■□□□□ 0.83
ATP6V0A1-220ENST00000588901 TRIM29Q14134 588 aa20.24■□□□□ 0.83
ATP6V0A1-220ENST00000588901 ADGRE1Q14246 886 aa20.24■□□□□ 0.83
ATP6V0A1-220ENST00000588901 RABEP1Q15276 862 aa20.24■□□□□ 0.83
ATP6V0A1-220ENST00000588901 MIER3Q7Z3K6 550 aa20.24■□□□□ 0.83
ATP6V0A1-220ENST00000588901 KIAA0319LQ8IZA0 1049 aa20.24■□□□□ 0.83
ATP6V0A1-220ENST00000588901 MYOCDQ8IZQ8 938 aa20.24■□□□□ 0.83
ATP6V0A1-220ENST00000588901 GAS2L1Q99501 681 aaPredicted RBP20.24■□□□□ 0.83
ATP6V0A1-220ENST00000588901 CELF4Q9BZC1 486 aaKnown RBP20.24■□□□□ 0.83
ATP6V0A1-220ENST00000588901 AGO3Q9H9G7 860 aaKnown RBP20.24■□□□□ 0.83
ATP6V0A1-220ENST00000588901 REV3LO60673 3130 aa20.24■□□□□ 0.83
ATP6V0A1-220ENST00000588901 COL4A6Q14031 1691 aa20.23■□□□□ 0.83
ATP6V0A1-220ENST00000588901 BTBD18B2RXH4 712 aa20.23■□□□□ 0.83
ATP6V0A1-220ENST00000588901 FOSBP53539 338 aa20.23■□□□□ 0.83
ATP6V0A1-220ENST00000588901 HTRA4P83105 476 aaPredicted RBP20.23■□□□□ 0.83
ATP6V0A1-220ENST00000588901 PPP2R5CQ13362 524 aa20.23■□□□□ 0.83
ATP6V0A1-220ENST00000588901 TRMT1LQ7Z2T5 733 aaKnown RBP20.23■□□□□ 0.83
ATP6V0A1-220ENST00000588901 POTEDQ86YR6 584 aa20.23■□□□□ 0.83
ATP6V0A1-220ENST00000588901 USP38Q8NB14 1042 aa20.23■□□□□ 0.83
ATP6V0A1-220ENST00000588901 HAS1Q92839 578 aa20.23■□□□□ 0.83
ATP6V0A1-220ENST00000588901 WDR81Q562E7 1941 aa20.22■□□□□ 0.83
ATP6V0A1-220ENST00000588901 FAM117BQ6P1L5 589 aa20.22■□□□□ 0.83
ATP6V0A1-220ENST00000588901 SPRED2Q7Z698 418 aa20.22■□□□□ 0.83
ATP6V0A1-220ENST00000588901 LINC01465Q8N7H1 131 aa20.22■□□□□ 0.83
ATP6V0A1-220ENST00000588901 TOP1MTQ969P6 601 aa20.22■□□□□ 0.83
ATP6V0A1-220ENST00000588901 UPF2Q9HAU5 1272 aaKnown RBP20.22■□□□□ 0.83
ATP6V0A1-220ENST00000588901 NRBP2Q9NSY0 501 aa20.22■□□□□ 0.83
ATP6V0A1-220ENST00000588901 MYH9P35579 1960 aaKnown RBP20.22■□□□□ 0.83
ATP6V0A1-220ENST00000588901 EPOPA6NHQ4 379 aa20.21■□□□□ 0.83
ATP6V0A1-220ENST00000588901 EML1O00423 815 aa20.21■□□□□ 0.83
ATP6V0A1-220ENST00000588901 MAGEB2O15479 319 aa20.21■□□□□ 0.83
ATP6V0A1-220ENST00000588901 STBD1O95210 358 aa20.21■□□□□ 0.83
ATP6V0A1-220ENST00000588901 CD52P31358 61 aa20.21■□□□□ 0.83
ATP6V0A1-220ENST00000588901 HMGN5P82970 282 aaKnown RBP20.21■□□□□ 0.83
ATP6V0A1-220ENST00000588901 TARBP2Q15633 366 aaKnown RBP20.21■□□□□ 0.83
ATP6V0A1-220ENST00000588901 SP7Q8TDD2 431 aaPredicted RBP20.21■□□□□ 0.83
ATP6V0A1-220ENST00000588901 INSL6Q9Y581 213 aa20.21■□□□□ 0.83
ATP6V0A1-220ENST00000588901 LINC01553A4QN01 128 aa20.2■□□□□ 0.82
ATP6V0A1-220ENST00000588901 XKR3Q5GH77 459 aa20.2■□□□□ 0.82
ATP6V0A1-220ENST00000588901 SLC17A8Q8NDX2 589 aa20.2■□□□□ 0.82
ATP6V0A1-220ENST00000588901 IL27Q8NEV9 243 aa20.2■□□□□ 0.82
ATP6V0A1-220ENST00000588901 LINC01599Q8WXQ3 324 aa20.2■□□□□ 0.82
ATP6V0A1-220ENST00000588901 C8orf76Q96K31 380 aa20.2■□□□□ 0.82
ATP6V0A1-220ENST00000588901 CERS4Q9HA82 394 aa20.2■□□□□ 0.82
ATP6V0A1-220ENST00000588901 WNT7AO00755 349 aa20.19■□□□□ 0.82
ATP6V0A1-220ENST00000588901 CLCN3P51790 818 aa20.19■□□□□ 0.82
ATP6V0A1-220ENST00000588901 GUCY1B3Q02153 619 aa20.19■□□□□ 0.82
ATP6V0A1-220ENST00000588901 SPIRE1Q08AE8 756 aa20.19■□□□□ 0.82
ATP6V0A1-220ENST00000588901 PAK2Q13177 524 aa20.19■□□□□ 0.82
ATP6V0A1-220ENST00000588901 SLFN12Q8IYM2 578 aa20.19■□□□□ 0.82
ATP6V0A1-220ENST00000588901 METTL13Q8N6R0 699 aa20.19■□□□□ 0.82
ATP6V0A1-220ENST00000588901 BANK1Q8NDB2 785 aa20.19■□□□□ 0.82
ATP6V0A1-220ENST00000588901 TMEM40Q8WWA1 233 aa20.19■□□□□ 0.82
ATP6V0A1-220ENST00000588901 ARNTL2Q8WYA1 636 aa20.19■□□□□ 0.82
ATP6V0A1-220ENST00000588901 TBC1D32Q96NH3 1257 aa20.19■□□□□ 0.82
ATP6V0A1-220ENST00000588901 CEP89Q96ST8 783 aa20.19■□□□□ 0.82
ATP6V0A1-220ENST00000588901 FTHL17Q9BXU8 183 aa20.19■□□□□ 0.82
ATP6V0A1-220ENST00000588901 NIFKQ9BYG3 293 aaKnown RBP20.19■□□□□ 0.82
ATP6V0A1-220ENST00000588901 CDHR5Q9HBB8 845 aa20.19■□□□□ 0.82
ATP6V0A1-220ENST00000588901 SEPT9Q9UHD8 586 aaPredicted RBP20.19■□□□□ 0.82
ATP6V0A1-220ENST00000588901 PADI3Q9ULW8 664 aa20.19■□□□□ 0.82
ATP6V0A1-220ENST00000588901 RFXAPO00287 272 aa20.18■□□□□ 0.82
ATP6V0A1-220ENST00000588901 ENPP3O14638 875 aa20.18■□□□□ 0.82
ATP6V0A1-220ENST00000588901 ST18O60284 1047 aa20.18■□□□□ 0.82
ATP6V0A1-220ENST00000588901 GPR32O75388 356 aa20.18■□□□□ 0.82
ATP6V0A1-220ENST00000588901 VTNP04004 478 aa20.18■□□□□ 0.82
ATP6V0A1-220ENST00000588901 CRYBB1P53674 252 aaPredicted RBP20.18■□□□□ 0.82
ATP6V0A1-220ENST00000588901 PSMC5P62195 406 aa20.18■□□□□ 0.82
ATP6V0A1-220ENST00000588901 SAFBQ15424 915 aaKnown RBP eCLIP20.18■□□□□ 0.82
ATP6V0A1-220ENST00000588901 KIZQ2M2Z5 673 aa20.18■□□□□ 0.82
ATP6V0A1-220ENST00000588901 EFCAB12Q6NXP0 572 aa20.18■□□□□ 0.82
ATP6V0A1-220ENST00000588901 LRRC71Q8N4P6 559 aa20.18■□□□□ 0.82
ATP6V0A1-220ENST00000588901 COL4A4P53420 1690 aaPredicted RBP20.18■□□□□ 0.82
ATP6V0A1-220ENST00000588901 TMEM150BA6NC51 233 aa20.17■□□□□ 0.82
ATP6V0A1-220ENST00000588901 NEMFO60524 1076 aa20.17■□□□□ 0.82
ATP6V0A1-220ENST00000588901 UPP2O95045 317 aa20.17■□□□□ 0.82
ATP6V0A1-220ENST00000588901 POU3F3P20264 500 aaPredicted RBP20.17■□□□□ 0.82
ATP6V0A1-220ENST00000588901 IGFBP4P22692 258 aa20.17■□□□□ 0.82
ATP6V0A1-220ENST00000588901 QARSP47897 775 aaKnown RBP20.17■□□□□ 0.82
ATP6V0A1-220ENST00000588901 ERVK-21P61565 698 aa20.17■□□□□ 0.82
ATP6V0A1-220ENST00000588901 TMEM266Q2M3C6 531 aa20.17■□□□□ 0.82
ATP6V0A1-220ENST00000588901 FAM43BQ6ZT52 329 aaPredicted RBP20.17■□□□□ 0.82
ATP6V0A1-220ENST00000588901 RTN4RL1Q86UN2 441 aaPredicted RBP20.17■□□□□ 0.82
ATP6V0A1-220ENST00000588901 FBXO18Q8NFZ0 1043 aa20.17■□□□□ 0.82
ATP6V0A1-220ENST00000588901 TGS1Q96RS0 853 aaKnown RBP20.17■□□□□ 0.82
ATP6V0A1-220ENST00000588901 MAP7D2Q96T17 732 aa20.17■□□□□ 0.82
ATP6V0A1-220ENST00000588901 YME1L1Q96TA2 773 aa20.17■□□□□ 0.82
ATP6V0A1-220ENST00000588901 TSPYL2Q9H2G4 693 aaPredicted RBP20.17■□□□□ 0.82
ATP6V0A1-220ENST00000588901 TMX1Q9H3N1 280 aa20.17■□□□□ 0.82
ATP6V0A1-220ENST00000588901 RC3H2Q9HBD1 1191 aaKnown RBP20.17■□□□□ 0.82
ATP6V0A1-220ENST00000588901 ERVK-5Q9HDB9 667 aa20.17■□□□□ 0.82
ATP6V0A1-220ENST00000588901 GINS2Q9Y248 185 aa20.17■□□□□ 0.82
ATP6V0A1-220ENST00000588901 NOC2LQ9Y3T9 749 aaKnown RBP20.17■□□□□ 0.82
ATP6V0A1-220ENST00000588901 VCANP13611 3396 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms