RNA–Protein interactions for RNA: ENST00000584582.5

TOP3A-217, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 3,661 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-217ENST00000584582 OSBPL9Q96SU4 736 aa12.33□□□□□ -0.44
TOP3A-217ENST00000584582 VCPKMTQ9H867 229 aa12.33□□□□□ -0.44
TOP3A-217ENST00000584582 NFU1Q9UMS0 254 aa12.33□□□□□ -0.44
TOP3A-217ENST00000584582 USTQ9Y2C2 406 aa12.33□□□□□ -0.44
TOP3A-217ENST00000584582 M0R2N6 131 aa12.33□□□□□ -0.44
TOP3A-217ENST00000584582 KRIT1O00522 736 aa12.33□□□□□ -0.44
TOP3A-217ENST00000584582 H2AFXP16104 143 aaPredicted RBP12.33□□□□□ -0.44
TOP3A-217ENST00000584582 SNRNP48Q6IEG0 339 aaKnown RBP12.33□□□□□ -0.44
TOP3A-217ENST00000584582 RNF207Q6ZRF8 634 aa12.33□□□□□ -0.44
TOP3A-217ENST00000584582 C15orf52Q6ZUT6 534 aaKnown RBP12.33□□□□□ -0.44
TOP3A-217ENST00000584582 SNED1Q8TER0 1413 aa12.33□□□□□ -0.44
TOP3A-217ENST00000584582 FNBP1Q96RU3 617 aa12.33□□□□□ -0.44
TOP3A-217ENST00000584582 FAM204AQ9H8W3 233 aa12.33□□□□□ -0.44
TOP3A-217ENST00000584582 ZNRF3Q9ULT6 936 aa12.33□□□□□ -0.44
TOP3A-217ENST00000584582 TBC1D8O95759 1140 aa12.32□□□□□ -0.44
TOP3A-217ENST00000584582 PBX1P40424 430 aa12.32□□□□□ -0.44
TOP3A-217ENST00000584582 PTK2Q05397 1052 aa12.32□□□□□ -0.44
TOP3A-217ENST00000584582 RINT1Q6NUQ1 792 aa12.32□□□□□ -0.44
TOP3A-217ENST00000584582 HDAC7Q8WUI4 952 aa12.32□□□□□ -0.44
TOP3A-217ENST00000584582 FAM151AQ8WW52 585 aa12.32□□□□□ -0.44
TOP3A-217ENST00000584582 DNAJC7Q99615 494 aa12.32□□□□□ -0.44
TOP3A-217ENST00000584582 TMOD4Q9NZQ9 345 aa12.32□□□□□ -0.44
TOP3A-217ENST00000584582 HERC5Q9UII4 1024 aaKnown RBP12.32□□□□□ -0.44
TOP3A-217ENST00000584582 PLAGL2Q9UPG8 496 aa12.32□□□□□ -0.44
TOP3A-217ENST00000584582 UCHL3P15374 230 aa12.32□□□□□ -0.44
TOP3A-217ENST00000584582 TCP1P17987 556 aaKnown RBP12.32□□□□□ -0.44
TOP3A-217ENST00000584582 OSTNP61366 133 aa12.32□□□□□ -0.44
TOP3A-217ENST00000584582 GABPB1Q06547 395 aaPredicted RBP12.32□□□□□ -0.44
TOP3A-217ENST00000584582 TNFAIP1Q13829 316 aa12.32□□□□□ -0.44
TOP3A-217ENST00000584582 BAATQ14032 418 aaPredicted RBP12.32□□□□□ -0.44
TOP3A-217ENST00000584582 NCAPG2Q86XI2 1143 aa12.32□□□□□ -0.44
TOP3A-217ENST00000584582 ZNF507Q8TCN5 953 aa12.32□□□□□ -0.44
TOP3A-217ENST00000584582 DNAJC19Q96DA6 116 aa12.32□□□□□ -0.44
TOP3A-217ENST00000584582 TAAR1Q96RJ0 339 aa12.32□□□□□ -0.44
TOP3A-217ENST00000584582 RPAP3Q9H6T3 665 aaPredicted RBP12.32□□□□□ -0.44
TOP3A-217ENST00000584582 KCNH7Q9NS40 1196 aa12.32□□□□□ -0.44
TOP3A-217ENST00000584582 CEP72Q9P209 647 aa12.32□□□□□ -0.44
TOP3A-217ENST00000584582 DUOX1Q9NRD9 1551 aa12.32□□□□□ -0.44
TOP3A-217ENST00000584582 MYH3P11055 1940 aa12.32□□□□□ -0.44
TOP3A-217ENST00000584582 ZSCAN5CA6NGD5 496 aaPredicted RBP12.32□□□□□ -0.44
TOP3A-217ENST00000584582 SMARCA1P28370 1054 aa12.32□□□□□ -0.44
TOP3A-217ENST00000584582 COPB2P35606 906 aa12.32□□□□□ -0.44
TOP3A-217ENST00000584582 R3HDM1Q15032 1099 aaKnown RBP12.32□□□□□ -0.44
TOP3A-217ENST00000584582 IFI16Q16666 785 aaKnown RBP12.32□□□□□ -0.44
TOP3A-217ENST00000584582 GADL1Q6ZQY3 521 aa12.32□□□□□ -0.44
TOP3A-217ENST00000584582 CCDC50Q8IVM0 306 aa12.32□□□□□ -0.44
TOP3A-217ENST00000584582 TAB3Q8N5C8 712 aaPredicted RBP12.32□□□□□ -0.44
TOP3A-217ENST00000584582 PRPF38AQ8NAV1 312 aaKnown RBP12.32□□□□□ -0.44
TOP3A-217ENST00000584582 ATG4CQ96DT6 458 aa12.32□□□□□ -0.44
TOP3A-217ENST00000584582 MTMR8Q96EF0 704 aa12.32□□□□□ -0.44
TOP3A-217ENST00000584582 N4BP2Q86UW6 1770 aaPredicted RBP12.32□□□□□ -0.44
TOP3A-217ENST00000584582 ASTN2O75129 1339 aaPredicted RBP12.32□□□□□ -0.44
TOP3A-217ENST00000584582 GOLGA6CA6NDK9 693 aa12.31□□□□□ -0.44
TOP3A-217ENST00000584582 ENTPD3O75355 529 aa12.31□□□□□ -0.44
TOP3A-217ENST00000584582 GOLGA6DP0CG33 693 aa12.31□□□□□ -0.44
TOP3A-217ENST00000584582 RPS6P62753 249 aaKnown RBP12.31□□□□□ -0.44
TOP3A-217ENST00000584582 DRAP1Q14919 205 aaPredicted RBP12.31□□□□□ -0.44
TOP3A-217ENST00000584582 EPC2Q52LR7 807 aa12.31□□□□□ -0.44
TOP3A-217ENST00000584582 NBPF12Q5TAG4 269 aaPredicted RBP12.31□□□□□ -0.44
TOP3A-217ENST00000584582 DLK2Q6UY11 383 aa12.31□□□□□ -0.44
TOP3A-217ENST00000584582 ERGIC2Q96RQ1 377 aa12.31□□□□□ -0.44
TOP3A-217ENST00000584582 UNC45AQ9H3U1 944 aa12.31□□□□□ -0.44
TOP3A-217ENST00000584582 RNF146Q9NTX7 359 aa12.31□□□□□ -0.44
TOP3A-217ENST00000584582 GOLGA6AQ9NYA3 693 aa12.31□□□□□ -0.44
TOP3A-217ENST00000584582 CWC15Q9P013 229 aaKnown RBP12.31□□□□□ -0.44
TOP3A-217ENST00000584582 ADAM21Q9UKJ8 722 aa12.31□□□□□ -0.44
TOP3A-217ENST00000584582 NID2Q14112 1375 aa12.31□□□□□ -0.44
TOP3A-217ENST00000584582 H0YHG0 523 aa12.31□□□□□ -0.44
TOP3A-217ENST00000584582 WNT10BO00744 389 aa12.31□□□□□ -0.44
TOP3A-217ENST00000584582 NF2P35240 595 aa12.31□□□□□ -0.44
TOP3A-217ENST00000584582 C2CD6Q53TS8 623 aa12.31□□□□□ -0.44
TOP3A-217ENST00000584582 KIAA1755Q5JYT7 1200 aa12.31□□□□□ -0.44
TOP3A-217ENST00000584582 C10orf67Q8IYJ2 551 aa12.31□□□□□ -0.44
TOP3A-217ENST00000584582 SPATA4Q8NEY3 305 aa12.31□□□□□ -0.44
TOP3A-217ENST00000584582 GLG1Q92896 1179 aa12.31□□□□□ -0.44
TOP3A-217ENST00000584582 MRRFQ96E11 262 aaKnown RBP12.31□□□□□ -0.44
TOP3A-217ENST00000584582 DDX47Q9H0S4 455 aaKnown RBP12.31□□□□□ -0.44
TOP3A-217ENST00000584582 METTL14Q9HCE5 456 aaKnown RBP12.31□□□□□ -0.44
TOP3A-217ENST00000584582 DMGDHQ9UI17 866 aaKnown RBP12.31□□□□□ -0.44
TOP3A-217ENST00000584582 CNOT7Q9UIV1 285 aaKnown RBP12.31□□□□□ -0.44
TOP3A-217ENST00000584582 CLEC11AQ9Y240 323 aa12.31□□□□□ -0.44
TOP3A-217ENST00000584582 GLI3P10071 1580 aa12.31□□□□□ -0.44
TOP3A-217ENST00000584582 RNF40O75150 1001 aa12.31□□□□□ -0.44
TOP3A-217ENST00000584582 TNNC1P63316 161 aa12.31□□□□□ -0.44
TOP3A-217ENST00000584582 GRM1Q13255 1194 aa12.31□□□□□ -0.44
TOP3A-217ENST00000584582 SWSAP1Q6NVH7 229 aa12.31□□□□□ -0.44
TOP3A-217ENST00000584582 DEFB129Q9H1M3 183 aa12.31□□□□□ -0.44
TOP3A-217ENST00000584582 ANKZF1Q9H8Y5 726 aa12.31□□□□□ -0.44
TOP3A-217ENST00000584582 MYOZ2Q9NPC6 264 aa12.31□□□□□ -0.44
TOP3A-217ENST00000584582 FAM184BQ9ULE4 1060 aa12.31□□□□□ -0.44
TOP3A-217ENST00000584582 PTPN22Q9Y2R2 807 aa12.31□□□□□ -0.44
TOP3A-217ENST00000584582 GSTTP1A0A1W2PQM5 241 aa12.3□□□□□ -0.44
TOP3A-217ENST00000584582 PDE2AO00408 941 aaPredicted RBP12.3□□□□□ -0.44
TOP3A-217ENST00000584582 ERLIN2O94905 339 aa12.3□□□□□ -0.44
TOP3A-217ENST00000584582 EYA4O95677 639 aa12.3□□□□□ -0.44
TOP3A-217ENST00000584582 EGFRP00533 1210 aa12.3□□□□□ -0.44
TOP3A-217ENST00000584582 IGBP1P78318 339 aa12.3□□□□□ -0.44
TOP3A-217ENST00000584582 STYK1Q6J9G0 422 aa12.3□□□□□ -0.44
TOP3A-217ENST00000584582 IL31RAQ8NI17 732 aa12.3□□□□□ -0.44
TOP3A-217ENST00000584582 TYW1Q9NV66 732 aaKnown RBP12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms