RNA–Protein interactions for RNA: ENST00000578314.1

VAPA-205, Transcript of VAMP associated protein A, humanhuman

TSL 3

Gene VAPA, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-205ENST00000578314 ZNF862O60290 1169 aa25.92■■□□□ 1.74
VAPA-205ENST00000578314 C22orf31O95567 290 aa25.92■■□□□ 1.74
VAPA-205ENST00000578314 ERVK-21P61565 698 aa25.92■■□□□ 1.74
VAPA-205ENST00000578314 CCDC85BQ15834 202 aaPredicted RBP25.92■■□□□ 1.74
VAPA-205ENST00000578314 LETM2Q2VYF4 491 aa25.92■■□□□ 1.74
VAPA-205ENST00000578314 NEK8Q86SG6 692 aa25.92■■□□□ 1.74
VAPA-205ENST00000578314 NRBP2Q9NSY0 501 aa25.92■■□□□ 1.74
VAPA-205ENST00000578314 CEP131Q9UPN4 1083 aa25.92■■□□□ 1.74
VAPA-205ENST00000578314 CHMP2AO43633 222 aa25.91■■□□□ 1.74
VAPA-205ENST00000578314 SLC37A4O43826 429 aa25.91■■□□□ 1.74
VAPA-205ENST00000578314 GCFC2P16383 781 aaKnown RBP25.91■■□□□ 1.74
VAPA-205ENST00000578314 TJAP1Q5JTD0 557 aa25.91■■□□□ 1.74
VAPA-205ENST00000578314 PIK3AP1Q6ZUJ8 805 aa25.91■■□□□ 1.74
VAPA-205ENST00000578314 SYMPKQ92797 1274 aaKnown RBP25.91■■□□□ 1.74
VAPA-205ENST00000578314 TGS1Q96RS0 853 aaKnown RBP25.91■■□□□ 1.74
VAPA-205ENST00000578314 LIMCH1Q9UPQ0 1083 aa25.91■■□□□ 1.74
VAPA-205ENST00000578314 REV3LO60673 3130 aa25.91■■□□□ 1.74
VAPA-205ENST00000578314 JAK2O60674 1132 aa25.9■■□□□ 1.74
VAPA-205ENST00000578314 OATP04181 439 aa25.9■■□□□ 1.74
VAPA-205ENST00000578314 CD52P31358 61 aa25.9■■□□□ 1.74
VAPA-205ENST00000578314 ST3GAL1Q11201 340 aa25.9■■□□□ 1.74
VAPA-205ENST00000578314 EARS2Q5JPH6 523 aaKnown RBP25.9■■□□□ 1.74
VAPA-205ENST00000578314 FAM43BQ6ZT52 329 aaPredicted RBP25.9■■□□□ 1.74
VAPA-205ENST00000578314 MIER3Q7Z3K6 550 aa25.9■■□□□ 1.74
VAPA-205ENST00000578314 TNFRSF25Q93038 417 aa25.9■■□□□ 1.74
VAPA-205ENST00000578314 FAM20AQ96MK3 541 aa25.9■■□□□ 1.74
VAPA-205ENST00000578314 KIF2CQ99661 725 aa25.9■■□□□ 1.74
VAPA-205ENST00000578314 NAP1L4Q99733 375 aaKnown RBP25.9■■□□□ 1.74
VAPA-205ENST00000578314 KCNMB3Q9NPA1 279 aa25.9■■□□□ 1.74
VAPA-205ENST00000578314 THEGQ9P2T0 379 aa25.9■■□□□ 1.74
VAPA-205ENST00000578314 MTCH2Q9Y6C9 303 aa25.9■■□□□ 1.74
VAPA-205ENST00000578314 MAGEB2O15479 319 aa25.89■■□□□ 1.74
VAPA-205ENST00000578314 UPP2O95045 317 aa25.89■■□□□ 1.74
VAPA-205ENST00000578314 KRT2P35908 639 aa25.89■■□□□ 1.74
VAPA-205ENST00000578314 UGCGQ16739 394 aa25.89■■□□□ 1.74
VAPA-205ENST00000578314 TRMT1LQ7Z2T5 733 aaKnown RBP25.89■■□□□ 1.74
VAPA-205ENST00000578314 FTHL17Q9BXU8 183 aa25.89■■□□□ 1.74
VAPA-205ENST00000578314 PADI3Q9ULW8 664 aa25.89■■□□□ 1.74
VAPA-205ENST00000578314 MICAL3Q7RTP6 2002 aa25.88■■□□□ 1.73
VAPA-205ENST00000578314 GTPBP6O43824 516 aaPredicted RBP25.88■■□□□ 1.73
VAPA-205ENST00000578314 LPXNO60711 386 aa25.88■■□□□ 1.73
VAPA-205ENST00000578314 PRKCEQ02156 737 aa25.88■■□□□ 1.73
VAPA-205ENST00000578314 GRB10Q13322 594 aa25.88■■□□□ 1.73
VAPA-205ENST00000578314 RTN4RL1Q86UN2 441 aaPredicted RBP25.88■■□□□ 1.73
VAPA-205ENST00000578314 ATXN2LQ8WWM7 1075 aaKnown RBP25.88■■□□□ 1.73
VAPA-205ENST00000578314 YME1L1Q96TA2 773 aa25.88■■□□□ 1.73
VAPA-205ENST00000578314 CDHR5Q9HBB8 845 aa25.88■■□□□ 1.73
VAPA-205ENST00000578314 BRMS1Q9HCU9 246 aa25.88■■□□□ 1.73
VAPA-205ENST00000578314 TBX3O15119 743 aa25.87■■□□□ 1.73
VAPA-205ENST00000578314 CCNT1O60563 726 aaKnown RBP25.87■■□□□ 1.73
VAPA-205ENST00000578314 NR5A1Q13285 461 aa25.87■■□□□ 1.73
VAPA-205ENST00000578314 LINC01465Q8N7H1 131 aa25.87■■□□□ 1.73
VAPA-205ENST00000578314 SUGCTQ9HAC7 445 aa25.87■■□□□ 1.73
VAPA-205ENST00000578314 STBD1O95210 358 aa25.86■■□□□ 1.73
VAPA-205ENST00000578314 MMP1P03956 469 aa25.86■■□□□ 1.73
VAPA-205ENST00000578314 PAK2Q13177 524 aa25.86■■□□□ 1.73
VAPA-205ENST00000578314 PPP2R5CQ13362 524 aa25.86■■□□□ 1.73
VAPA-205ENST00000578314 TARBP2Q15633 366 aaKnown RBP25.86■■□□□ 1.73
VAPA-205ENST00000578314 MICALL1Q8N3F8 863 aa25.86■■□□□ 1.73
VAPA-205ENST00000578314 METTL13Q8N6R0 699 aa25.86■■□□□ 1.73
VAPA-205ENST00000578314 LINC01599Q8WXQ3 324 aa25.86■■□□□ 1.73
VAPA-205ENST00000578314 HAS1Q92839 578 aa25.86■■□□□ 1.73
VAPA-205ENST00000578314 NIFKQ9BYG3 293 aaKnown RBP25.86■■□□□ 1.73
VAPA-205ENST00000578314 LMCD1Q9NZU5 365 aa25.86■■□□□ 1.73
VAPA-205ENST00000578314 FAM205CA6NFA0 338 aa25.85■■□□□ 1.73
VAPA-205ENST00000578314 GPR32O75388 356 aa25.85■■□□□ 1.73
VAPA-205ENST00000578314 RBM25P49756 843 aaKnown RBP25.85■■□□□ 1.73
VAPA-205ENST00000578314 CRYBB1P53674 252 aaPredicted RBP25.85■■□□□ 1.73
VAPA-205ENST00000578314 XKR3Q5GH77 459 aa25.85■■□□□ 1.73
VAPA-205ENST00000578314 EFCAB12Q6NXP0 572 aa25.85■■□□□ 1.73
VAPA-205ENST00000578314 CRIPAKQ8N1N5 446 aa25.85■■□□□ 1.73
VAPA-205ENST00000578314 ZSCAN31Q96LW9 406 aaPredicted RBP25.85■■□□□ 1.73
VAPA-205ENST00000578314 LLPHQ9BRT6 129 aaKnown RBP25.85■■□□□ 1.73
VAPA-205ENST00000578314 TSPYL2Q9H2G4 693 aaPredicted RBP25.85■■□□□ 1.73
VAPA-205ENST00000578314 VAV3Q9UKW4 847 aa25.85■■□□□ 1.73
VAPA-205ENST00000578314 MTUS1Q9ULD2 1270 aa25.85■■□□□ 1.73
VAPA-205ENST00000578314 GINS2Q9Y248 185 aa25.85■■□□□ 1.73
VAPA-205ENST00000578314 SIP14410 1827 aa25.84■■□□□ 1.73
VAPA-205ENST00000578314 BTBD18B2RXH4 712 aa25.84■■□□□ 1.73
VAPA-205ENST00000578314 TMOD1P28289 359 aa25.84■■□□□ 1.73
VAPA-205ENST00000578314 TRIM29Q14134 588 aa25.84■■□□□ 1.73
VAPA-205ENST00000578314 KRT40Q6A162 431 aa25.84■■□□□ 1.73
VAPA-205ENST00000578314 ZNF710Q8N1W2 664 aa25.84■■□□□ 1.73
VAPA-205ENST00000578314 TMEM40Q8WWA1 233 aa25.84■■□□□ 1.73
VAPA-205ENST00000578314 TTC28Q96AY4 2481 aa25.84■■□□□ 1.73
VAPA-205ENST00000578314 SAMD11Q96NU1 681 aa25.84■■□□□ 1.73
VAPA-205ENST00000578314 C17orf80Q9BSJ5 609 aa25.84■■□□□ 1.73
VAPA-205ENST00000578314 TMX1Q9H3N1 280 aa25.84■■□□□ 1.73
VAPA-205ENST00000578314 RC3H2Q9HBD1 1191 aaKnown RBP25.84■■□□□ 1.73
VAPA-205ENST00000578314 ERVK-5Q9HDB9 667 aa25.84■■□□□ 1.73
VAPA-205ENST00000578314 NOC2LQ9Y3T9 749 aaKnown RBP25.84■■□□□ 1.73
VAPA-205ENST00000578314 EML1O00423 815 aa25.83■■□□□ 1.73
VAPA-205ENST00000578314 RPS6KA5O75582 802 aa25.83■■□□□ 1.73
VAPA-205ENST00000578314 VTNP04004 478 aa25.83■■□□□ 1.73
VAPA-205ENST00000578314 CLCN3P51790 818 aa25.83■■□□□ 1.73
VAPA-205ENST00000578314 KIZQ2M2Z5 673 aa25.83■■□□□ 1.73
VAPA-205ENST00000578314 TMEM266Q2M3C6 531 aa25.83■■□□□ 1.73
VAPA-205ENST00000578314 ODR4Q5SWX8 454 aa25.83■■□□□ 1.73
VAPA-205ENST00000578314 DIS3L2Q8IYB7 885 aaKnown RBP25.83■■□□□ 1.73
VAPA-205ENST00000578314 GDPD5Q8WTR4 605 aa25.83■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms