RNA–Protein interactions for RNA: ENST00000567805.5

CLK3-219, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-219ENST00000567805 ARID2Q68CP9 1835 aa5.42□□□□□ -1.54
CLK3-219ENST00000567805 SMIM35A0A1B0GVV1 85 aa5.42□□□□□ -1.54
CLK3-219ENST00000567805 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.42□□□□□ -1.54
CLK3-219ENST00000567805 LCHNA4D1U4 455 aa5.42□□□□□ -1.54
CLK3-219ENST00000567805 LINC01553A4QN01 128 aa5.42□□□□□ -1.54
CLK3-219ENST00000567805 EPOPA6NHQ4 379 aa5.42□□□□□ -1.54
CLK3-219ENST00000567805 WDR64B1ANS9 1081 aa5.42□□□□□ -1.54
CLK3-219ENST00000567805 M0QZ92 97 aa5.42□□□□□ -1.54
CLK3-219ENST00000567805 M0R2N6 131 aa5.42□□□□□ -1.54
CLK3-219ENST00000567805 DDX39AO00148 427 aaKnown RBP5.42□□□□□ -1.54
CLK3-219ENST00000567805 PFKFB2O60825 505 aa5.42□□□□□ -1.54
CLK3-219ENST00000567805 ARHGEF15O94989 841 aa5.42□□□□□ -1.54
CLK3-219ENST00000567805 PSAPP07602 524 aa5.42□□□□□ -1.54
CLK3-219ENST00000567805 GHRP10912 638 aa5.42□□□□□ -1.54
CLK3-219ENST00000567805 XBP1P17861 261 aa5.42□□□□□ -1.54
CLK3-219ENST00000567805 ERVK-21P61565 698 aa5.42□□□□□ -1.54
CLK3-219ENST00000567805 MRPS6P82932 125 aaKnown RBP5.42□□□□□ -1.54
CLK3-219ENST00000567805 HTRA4P83105 476 aaPredicted RBP5.42□□□□□ -1.54
CLK3-219ENST00000567805 SCRN1Q12765 414 aa5.42□□□□□ -1.54
CLK3-219ENST00000567805 PDAP1Q13442 181 aaKnown RBP5.42□□□□□ -1.54
CLK3-219ENST00000567805 LPIN1Q14693 890 aa5.42□□□□□ -1.54
CLK3-219ENST00000567805 CCDC85BQ15834 202 aaPredicted RBP5.42□□□□□ -1.54
CLK3-219ENST00000567805 PRR16Q569H4 304 aa5.42□□□□□ -1.54
CLK3-219ENST00000567805 ZNF484Q5JVG2 852 aa5.42□□□□□ -1.54
CLK3-219ENST00000567805 FBXO47Q5MNV8 452 aa5.42□□□□□ -1.54
CLK3-219ENST00000567805 SWSAP1Q6NVH7 229 aa5.42□□□□□ -1.54
CLK3-219ENST00000567805 FAM117BQ6P1L5 589 aa5.42□□□□□ -1.54
CLK3-219ENST00000567805 PDXDC2PQ6P474 469 aa5.42□□□□□ -1.54
CLK3-219ENST00000567805 TMEM92Q6UXU6 159 aa5.42□□□□□ -1.54
CLK3-219ENST00000567805 TSHZ1Q6ZSZ6 1077 aa5.42□□□□□ -1.54
CLK3-219ENST00000567805 FAM43BQ6ZT52 329 aaPredicted RBP5.42□□□□□ -1.54
CLK3-219ENST00000567805 CKAP2LQ8IYA6 745 aa5.42□□□□□ -1.54
CLK3-219ENST00000567805 BLIDQ8IZY5 108 aa5.42□□□□□ -1.54
CLK3-219ENST00000567805 NME8Q8N427 588 aa5.42□□□□□ -1.54
CLK3-219ENST00000567805 DAGLBQ8NCG7 672 aa5.42□□□□□ -1.54
CLK3-219ENST00000567805 TBCKQ8TEA7 893 aa5.42□□□□□ -1.54
CLK3-219ENST00000567805 TRAPPC12Q8WVT3 735 aa5.42□□□□□ -1.54
CLK3-219ENST00000567805 ATXN2LQ8WWM7 1075 aaKnown RBP5.42□□□□□ -1.54
CLK3-219ENST00000567805 PPM1EQ8WY54 764 aa5.42□□□□□ -1.54
CLK3-219ENST00000567805 ARNTL2Q8WYA1 636 aa5.42□□□□□ -1.54
CLK3-219ENST00000567805 SYMPKQ92797 1274 aaKnown RBP5.42□□□□□ -1.54
CLK3-219ENST00000567805 LENG9Q96B70 501 aa5.42□□□□□ -1.54
CLK3-219ENST00000567805 TGS1Q96RS0 853 aaKnown RBP5.42□□□□□ -1.54
CLK3-219ENST00000567805 RIT2Q99578 217 aa5.42□□□□□ -1.54
CLK3-219ENST00000567805 LARP6Q9BRS8 491 aaKnown RBP5.42□□□□□ -1.54
CLK3-219ENST00000567805 COL25A1Q9BXS0 654 aaPredicted RBP5.42□□□□□ -1.54
CLK3-219ENST00000567805 OSBPL7Q9BZF2 842 aa5.42□□□□□ -1.54
CLK3-219ENST00000567805 FAM49AQ9H0Q0 323 aaPredicted RBP5.42□□□□□ -1.54
CLK3-219ENST00000567805 SLKQ9H2G2 1235 aaPredicted RBP5.42□□□□□ -1.54
CLK3-219ENST00000567805 CERS4Q9HA82 394 aa5.42□□□□□ -1.54
CLK3-219ENST00000567805 ZNF302Q9NR11 478 aa5.42□□□□□ -1.54
CLK3-219ENST00000567805 THEGQ9P2T0 379 aa5.42□□□□□ -1.54
CLK3-219ENST00000567805 PCDHA10Q9Y5I2 948 aa5.42□□□□□ -1.54
CLK3-219ENST00000567805 MAFBQ9Y5Q3 323 aaPredicted RBP5.42□□□□□ -1.54
CLK3-219ENST00000567805 GTF3C3Q9Y5Q9 886 aa5.42□□□□□ -1.54
CLK3-219ENST00000567805 MTCH2Q9Y6C9 303 aa5.42□□□□□ -1.54
CLK3-219ENST00000567805 CDY2AQ9Y6F7 541 aa5.42□□□□□ -1.54
CLK3-219ENST00000567805 FNDC1Q4ZHG4 1894 aaPredicted RBP5.42□□□□□ -1.54
CLK3-219ENST00000567805 IGSF9BQ9UPX0 1349 aa5.42□□□□□ -1.54
CLK3-219ENST00000567805 KDM3AQ9Y4C1 1321 aa5.42□□□□□ -1.54
CLK3-219ENST00000567805 C5orf42Q9H799 3197 aa5.42□□□□□ -1.54
CLK3-219ENST00000567805 CYP3A7-CYP3A51PA0A087WV96 503 aa5.41□□□□□ -1.54
CLK3-219ENST00000567805 ZBTB42B2RXF5 422 aa5.41□□□□□ -1.54
CLK3-219ENST00000567805 RFXAPO00287 272 aa5.41□□□□□ -1.54
CLK3-219ENST00000567805 MSH4O15457 936 aa5.41□□□□□ -1.54
CLK3-219ENST00000567805 EDIL3O43854 480 aa5.41□□□□□ -1.54
CLK3-219ENST00000567805 LPXNO60711 386 aa5.41□□□□□ -1.54
CLK3-219ENST00000567805 GAS7O60861 476 aa5.41□□□□□ -1.54
CLK3-219ENST00000567805 UPP2O95045 317 aa5.41□□□□□ -1.54
CLK3-219ENST00000567805 ATP4AP20648 1035 aa5.41□□□□□ -1.54
CLK3-219ENST00000567805 CYP3A7P24462 503 aa5.41□□□□□ -1.54
CLK3-219ENST00000567805 KLRC1P26715 233 aa5.41□□□□□ -1.54
CLK3-219ENST00000567805 SFNP31947 248 aa5.41□□□□□ -1.54
CLK3-219ENST00000567805 AK2P54819 239 aa5.41□□□□□ -1.54
CLK3-219ENST00000567805 GRB10Q13322 594 aa5.41□□□□□ -1.54
CLK3-219ENST00000567805 NONOQ15233 471 aaKnown RBP eCLIP5.41□□□□□ -1.54
CLK3-219ENST00000567805 NPY5RQ15761 445 aa5.41□□□□□ -1.54
CLK3-219ENST00000567805 Q4G0T1 1027 aa5.41□□□□□ -1.54
CLK3-219ENST00000567805 TJAP1Q5JTD0 557 aa5.41□□□□□ -1.54
CLK3-219ENST00000567805 LRCH2Q5VUJ6 765 aa5.41□□□□□ -1.54
CLK3-219ENST00000567805 MTHFD1LQ6UB35 978 aa5.41□□□□□ -1.54
CLK3-219ENST00000567805 MOXD1Q6UVY6 613 aa5.41□□□□□ -1.54
CLK3-219ENST00000567805 KRT25Q7Z3Z0 450 aa5.41□□□□□ -1.54
CLK3-219ENST00000567805 MICALL1Q8N3F8 863 aa5.41□□□□□ -1.54
CLK3-219ENST00000567805 RDM1Q8NG50 284 aa5.41□□□□□ -1.54
CLK3-219ENST00000567805 SLC5A5Q92911 643 aa5.41□□□□□ -1.54
CLK3-219ENST00000567805 ZBTB10Q96DT7 871 aa5.41□□□□□ -1.54
CLK3-219ENST00000567805 FAM167AQ96KS9 214 aa5.41□□□□□ -1.54
CLK3-219ENST00000567805 AIFM3Q96NN9 605 aa5.41□□□□□ -1.54
CLK3-219ENST00000567805 SAMD11Q96NU1 681 aa5.41□□□□□ -1.54
CLK3-219ENST00000567805 UIMC1Q96RL1 719 aa5.41□□□□□ -1.54
CLK3-219ENST00000567805 YME1L1Q96TA2 773 aa5.41□□□□□ -1.54
CLK3-219ENST00000567805 PHF20Q9BVI0 1012 aa5.41□□□□□ -1.54
CLK3-219ENST00000567805 FTHL17Q9BXU8 183 aa5.41□□□□□ -1.54
CLK3-219ENST00000567805 CELF4Q9BZC1 486 aaKnown RBP5.41□□□□□ -1.54
CLK3-219ENST00000567805 SUGCTQ9HAC7 445 aa5.41□□□□□ -1.54
CLK3-219ENST00000567805 DISC1Q9NRI5 854 aa5.41□□□□□ -1.54
CLK3-219ENST00000567805 LMCD1Q9NZU5 365 aa5.41□□□□□ -1.54
CLK3-219ENST00000567805 GABBR1Q9UBS5 961 aa5.41□□□□□ -1.54
CLK3-219ENST00000567805 TPCN1Q9ULQ1 816 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms