RNA–Protein interactions for RNA: ENST00000557262.5

TUBB3-213, Transcript of tubulin beta 3 class III, humanhuman

TSL 1 (best)

Gene TUBB3, Length 888 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-213ENST00000557262 NLRC5Q86WI3 1866 aa18.02■□□□□ 0.48
TUBB3-213ENST00000557262 CKAP2LQ8IYA6 745 aa18.02■□□□□ 0.48
TUBB3-213ENST00000557262 SMAP1Q8IYB5 467 aaPredicted RBP18.02■□□□□ 0.48
TUBB3-213ENST00000557262 CMTR2Q8IYT2 770 aaKnown RBP18.02■□□□□ 0.48
TUBB3-213ENST00000557262 CCDC148Q8NFR7 591 aa18.02■□□□□ 0.48
TUBB3-213ENST00000557262 BBXQ8WY36 941 aaPredicted RBP18.02■□□□□ 0.48
TUBB3-213ENST00000557262 SLC26A6Q9BXS9 759 aa18.02■□□□□ 0.48
TUBB3-213ENST00000557262 TMX1Q9H3N1 280 aa18.02■□□□□ 0.48
TUBB3-213ENST00000557262 CDHR5Q9HBB8 845 aa18.02■□□□□ 0.48
TUBB3-213ENST00000557262 CD320Q9NPF0 282 aa18.02■□□□□ 0.48
TUBB3-213ENST00000557262 GINS2Q9Y248 185 aa18.02■□□□□ 0.48
TUBB3-213ENST00000557262 PCDHA10Q9Y5I2 948 aa18.02■□□□□ 0.48
TUBB3-213ENST00000557262 RALGAPA2Q2PPJ7 1873 aa18.01■□□□□ 0.47
TUBB3-213ENST00000557262 ZBTB42B2RXF5 422 aa18.01■□□□□ 0.47
TUBB3-213ENST00000557262 H3BQ06 376 aaPredicted RBP18.01■□□□□ 0.47
TUBB3-213ENST00000557262 RPS6KA5O75582 802 aa18.01■□□□□ 0.47
TUBB3-213ENST00000557262 IL9P15248 144 aa18.01■□□□□ 0.47
TUBB3-213ENST00000557262 CCT2P78371 535 aaKnown RBP18.01■□□□□ 0.47
TUBB3-213ENST00000557262 TMEM266Q2M3C6 531 aa18.01■□□□□ 0.47
TUBB3-213ENST00000557262 NAALADL2Q58DX5 795 aa18.01■□□□□ 0.47
TUBB3-213ENST00000557262 RASGRP4Q8TDF6 673 aa18.01■□□□□ 0.47
TUBB3-213ENST00000557262 P2RX5Q93086 422 aa18.01■□□□□ 0.47
TUBB3-213ENST00000557262 TCEAL9Q9UHQ7 104 aa18.01■□□□□ 0.47
TUBB3-213ENST00000557262 RAPGEFL1Q9UHV5 662 aa18.01■□□□□ 0.47
TUBB3-213ENST00000557262 LRFN2Q9ULH4 789 aa18.01■□□□□ 0.47
TUBB3-213ENST00000557262 PLAGL2Q9UPG8 496 aa18.01■□□□□ 0.47
TUBB3-213ENST00000557262 NOC2LQ9Y3T9 749 aaKnown RBP18.01■□□□□ 0.47
TUBB3-213ENST00000557262 MRPL42Q9Y6G3 142 aaKnown RBP18.01■□□□□ 0.47
TUBB3-213ENST00000557262 GPR182O15218 404 aa18■□□□□ 0.47
TUBB3-213ENST00000557262 EPB41L2O43491 1005 aaKnown RBP18■□□□□ 0.47
TUBB3-213ENST00000557262 PPFIA3O75145 1194 aa18■□□□□ 0.47
TUBB3-213ENST00000557262 USP11P51784 963 aa18■□□□□ 0.47
TUBB3-213ENST00000557262 RUFY3Q7L099 469 aa18■□□□□ 0.47
TUBB3-213ENST00000557262 TRMT1LQ7Z2T5 733 aaKnown RBP18■□□□□ 0.47
TUBB3-213ENST00000557262 GJD3Q8N144 294 aa18■□□□□ 0.47
TUBB3-213ENST00000557262 ERVK-5Q9HDB9 667 aa18■□□□□ 0.47
TUBB3-213ENST00000557262 ALG13Q9NP73 1137 aaKnown RBP18■□□□□ 0.47
TUBB3-213ENST00000557262 SH3GLB2Q9NR46 395 aa18■□□□□ 0.47
TUBB3-213ENST00000557262 RNF216Q9NWF9 866 aaPredicted RBP18■□□□□ 0.47
TUBB3-213ENST00000557262 CLDND1Q9NY35 253 aa18■□□□□ 0.47
TUBB3-213ENST00000557262 GABBR1Q9UBS5 961 aa18■□□□□ 0.47
TUBB3-213ENST00000557262 FAM50BQ9Y247 325 aa18■□□□□ 0.47
TUBB3-213ENST00000557262 PCDHB7Q9Y5E2 793 aa18■□□□□ 0.47
TUBB3-213ENST00000557262 PI4K2BG5E9Z4 385 aa17.99■□□□□ 0.47
TUBB3-213ENST00000557262 C22orf31O95567 290 aa17.99■□□□□ 0.47
TUBB3-213ENST00000557262 SARSP49591 514 aaKnown RBP17.99■□□□□ 0.47
TUBB3-213ENST00000557262 CRYBB1P53674 252 aaPredicted RBP17.99■□□□□ 0.47
TUBB3-213ENST00000557262 PAN2Q504Q3 1202 aaKnown RBP17.99■□□□□ 0.47
TUBB3-213ENST00000557262 TMEM40Q8WWA1 233 aa17.99■□□□□ 0.47
TUBB3-213ENST00000557262 KHSRPQ92945 711 aaKnown RBP eCLIP17.99■□□□□ 0.47
TUBB3-213ENST00000557262 ADAM2Q99965 735 aa17.99■□□□□ 0.47
TUBB3-213ENST00000557262 NCOA5Q9HCD5 579 aaKnown RBP17.99■□□□□ 0.47
TUBB3-213ENST00000557262 ZSWIM6Q9HCJ5 1215 aa17.99■□□□□ 0.47
TUBB3-213ENST00000557262 RGS18Q9NS28 235 aa17.99■□□□□ 0.47
TUBB3-213ENST00000557262 VPS54Q9P1Q0 977 aa17.99■□□□□ 0.47
TUBB3-213ENST00000557262 ST3GAL5Q9UNP4 418 aa17.99■□□□□ 0.47
TUBB3-213ENST00000557262 CEP131Q9UPN4 1083 aa17.99■□□□□ 0.47
TUBB3-213ENST00000557262 SAMM50Q9Y512 469 aa17.99■□□□□ 0.47
TUBB3-213ENST00000557262 MYO7AQ13402 2215 aa17.99■□□□□ 0.47
TUBB3-213ENST00000557262 MAGEB2O15479 319 aa17.98■□□□□ 0.47
TUBB3-213ENST00000557262 EDIL3O43854 480 aa17.98■□□□□ 0.47
TUBB3-213ENST00000557262 MMP1P03956 469 aa17.98■□□□□ 0.47
TUBB3-213ENST00000557262 LTBRP36941 435 aa17.98■□□□□ 0.47
TUBB3-213ENST00000557262 NLRP5P59047 1200 aa17.98■□□□□ 0.47
TUBB3-213ENST00000557262 HYAL1Q12794 435 aa17.98■□□□□ 0.47
TUBB3-213ENST00000557262 CAMK1Q14012 370 aa17.98■□□□□ 0.47
TUBB3-213ENST00000557262 CTC1Q2NKJ3 1217 aa17.98■□□□□ 0.47
TUBB3-213ENST00000557262 SLC24A5Q71RS6 500 aa17.98■□□□□ 0.47
TUBB3-213ENST00000557262 METTL13Q8N6R0 699 aa17.98■□□□□ 0.47
TUBB3-213ENST00000557262 SPPL3Q8TCT6 385 aa17.98■□□□□ 0.47
TUBB3-213ENST00000557262 LENG9Q96B70 501 aa17.98■□□□□ 0.47
TUBB3-213ENST00000557262 FAM167AQ96KS9 214 aa17.98■□□□□ 0.47
TUBB3-213ENST00000557262 LRFN3Q9BTN0 628 aa17.98■□□□□ 0.47
TUBB3-213ENST00000557262 C1orf112Q9NSG2 853 aa17.98■□□□□ 0.47
TUBB3-213ENST00000557262 NRBP2Q9NSY0 501 aa17.98■□□□□ 0.47
TUBB3-213ENST00000557262 DENND3A2RUS2 1198 aa17.97■□□□□ 0.47
TUBB3-213ENST00000557262 WDR64B1ANS9 1081 aa17.97■□□□□ 0.47
TUBB3-213ENST00000557262 MSH4O15457 936 aa17.97■□□□□ 0.47
TUBB3-213ENST00000557262 MGEA5O60502 916 aa17.97■□□□□ 0.47
TUBB3-213ENST00000557262 GPR37L1O60883 481 aa17.97■□□□□ 0.47
TUBB3-213ENST00000557262 GPR32O75388 356 aa17.97■□□□□ 0.47
TUBB3-213ENST00000557262 ITGB1P05556 798 aa17.97■□□□□ 0.47
TUBB3-213ENST00000557262 SSTR3P32745 418 aaPredicted RBP17.97■□□□□ 0.47
TUBB3-213ENST00000557262 GATMP50440 423 aa17.97■□□□□ 0.47
TUBB3-213ENST00000557262 SSRP1Q08945 709 aaKnown RBP17.97■□□□□ 0.47
TUBB3-213ENST00000557262 TOB2Q14106 344 aaPredicted RBP17.97■□□□□ 0.47
TUBB3-213ENST00000557262 KIZQ2M2Z5 673 aa17.97■□□□□ 0.47
TUBB3-213ENST00000557262 TMEM31Q5JXX7 168 aa17.97■□□□□ 0.47
TUBB3-213ENST00000557262 TRIM22Q8IYM9 498 aa17.97■□□□□ 0.47
TUBB3-213ENST00000557262 KLHL23Q8NBE8 558 aa17.97■□□□□ 0.47
TUBB3-213ENST00000557262 ZNF274Q96GC6 653 aaPredicted RBP17.97■□□□□ 0.47
TUBB3-213ENST00000557262 RIT2Q99578 217 aa17.97■□□□□ 0.47
TUBB3-213ENST00000557262 C22orf23Q9BZE7 217 aa17.97■□□□□ 0.47
TUBB3-213ENST00000557262 IGFLR1Q9H665 355 aa17.97■□□□□ 0.47
TUBB3-213ENST00000557262 DISC1Q9NRI5 854 aa17.97■□□□□ 0.47
TUBB3-213ENST00000557262 CYP46A1Q9Y6A2 500 aa17.97■□□□□ 0.47
TUBB3-213ENST00000557262 LOXHD1Q8IVV2 1947 aa17.97■□□□□ 0.47
TUBB3-213ENST00000557262 C9IYK1 514 aa17.96■□□□□ 0.47
TUBB3-213ENST00000557262 VTNP04004 478 aa17.96■□□□□ 0.47
TUBB3-213ENST00000557262 IBSPP21815 317 aaPredicted RBP17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 159.7 ms