RNA–Protein interactions for RNA: ENST00000544585.5

CPSF7-222, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 2

Gene CPSF7, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-222ENST00000544585 STXBP5LQ9Y2K9 1186 aa7.48□□□□□ -1.21
CPSF7-222ENST00000544585 SLC45A1Q9Y2W3 748 aa7.48□□□□□ -1.21
CPSF7-222ENST00000544585 MAST3O60307 1309 aa7.48□□□□□ -1.21
CPSF7-222ENST00000544585 MROH5Q6ZUA9 1318 aa7.48□□□□□ -1.21
CPSF7-222ENST00000544585 DNAJC25-GNG10A0A024R161 153 aa7.47□□□□□ -1.21
CPSF7-222ENST00000544585 GSG1L2A8MUP6 293 aa7.47□□□□□ -1.21
CPSF7-222ENST00000544585 PRODHO43272 600 aa7.47□□□□□ -1.21
CPSF7-222ENST00000544585 FGFR1P11362 822 aa7.47□□□□□ -1.21
CPSF7-222ENST00000544585 PABPC1P11940 636 aaKnown RBP7.47□□□□□ -1.21
CPSF7-222ENST00000544585 FLT3LGP49771 235 aa7.47□□□□□ -1.21
CPSF7-222ENST00000544585 CACNB3P54284 484 aa7.47□□□□□ -1.21
CPSF7-222ENST00000544585 SRSF11Q05519 484 aaKnown RBP7.47□□□□□ -1.21
CPSF7-222ENST00000544585 MAP7Q14244 749 aa7.47□□□□□ -1.21
CPSF7-222ENST00000544585 NKG7Q16617 165 aa7.47□□□□□ -1.21
CPSF7-222ENST00000544585 NOL9Q5SY16 702 aaKnown RBP7.47□□□□□ -1.21
CPSF7-222ENST00000544585 BEND3Q5T5X7 828 aa7.47□□□□□ -1.21
CPSF7-222ENST00000544585 GPAT2Q6NUI2 795 aa7.47□□□□□ -1.21
CPSF7-222ENST00000544585 ZNF227Q86WZ6 799 aa7.47□□□□□ -1.21
CPSF7-222ENST00000544585 UBASH3BQ8TF42 649 aa7.47□□□□□ -1.21
CPSF7-222ENST00000544585 PAWRQ96IZ0 340 aaKnown RBP7.47□□□□□ -1.21
CPSF7-222ENST00000544585 DEFB118Q96PH6 123 aa7.47□□□□□ -1.21
CPSF7-222ENST00000544585 TARS2Q9BW92 718 aaKnown RBP7.47□□□□□ -1.21
CPSF7-222ENST00000544585 MKRN2Q9H000 416 aaKnown RBP7.47□□□□□ -1.21
CPSF7-222ENST00000544585 KLHL25Q9H0H3 589 aa7.47□□□□□ -1.21
CPSF7-222ENST00000544585 PIDD1Q9HB75 910 aa7.47□□□□□ -1.21
CPSF7-222ENST00000544585 SSU72Q9NP77 194 aaKnown RBP7.47□□□□□ -1.21
CPSF7-222ENST00000544585 PAK6Q9NQU5 681 aaPredicted RBP7.47□□□□□ -1.21
CPSF7-222ENST00000544585 DISC1Q9NRI5 854 aa7.47□□□□□ -1.21
CPSF7-222ENST00000544585 KCNK4Q9NYG8 393 aa7.47□□□□□ -1.21
CPSF7-222ENST00000544585 APEX2Q9UBZ4 518 aa7.47□□□□□ -1.21
CPSF7-222ENST00000544585 SFMBT1Q9UHJ3 866 aa7.47□□□□□ -1.21
CPSF7-222ENST00000544585 GABRQQ9UN88 632 aa7.47□□□□□ -1.21
CPSF7-222ENST00000544585 ADGRA2Q96PE1 1338 aa7.47□□□□□ -1.21
CPSF7-222ENST00000544585 HTTP42858 3142 aa7.47□□□□□ -1.21
CPSF7-222ENST00000544585 LAMB1P07942 1786 aa7.46□□□□□ -1.21
CPSF7-222ENST00000544585 ZNF646O15015 1829 aaPredicted RBP7.46□□□□□ -1.21
CPSF7-222ENST00000544585 GRM8O00222 908 aa7.46□□□□□ -1.22
CPSF7-222ENST00000544585 TNPO2O14787 897 aaKnown RBP7.46□□□□□ -1.22
CPSF7-222ENST00000544585 CBFA2T2O43439 604 aa7.46□□□□□ -1.22
CPSF7-222ENST00000544585 VAMP4O75379 141 aa7.46□□□□□ -1.22
CPSF7-222ENST00000544585 ALDH1L1O75891 902 aa7.46□□□□□ -1.22
CPSF7-222ENST00000544585 CST3P01034 146 aaPredicted RBP7.46□□□□□ -1.22
CPSF7-222ENST00000544585 CYP2C8P10632 490 aa7.46□□□□□ -1.22
CPSF7-222ENST00000544585 AMPD1P23109 780 aa7.46□□□□□ -1.22
CPSF7-222ENST00000544585 NTF4P34130 210 aa7.46□□□□□ -1.22
CPSF7-222ENST00000544585 CHAF1AQ13111 956 aaPredicted RBP7.46□□□□□ -1.22
CPSF7-222ENST00000544585 DDX10Q13206 875 aaKnown RBP7.46□□□□□ -1.22
CPSF7-222ENST00000544585 MOGSQ13724 837 aa7.46□□□□□ -1.22
CPSF7-222ENST00000544585 TTLL4Q14679 1199 aa7.46□□□□□ -1.22
CPSF7-222ENST00000544585 PRAMEF13Q5VWM6 474 aa7.46□□□□□ -1.22
CPSF7-222ENST00000544585 C1orf229Q6ZS94 237 aaPredicted RBP7.46□□□□□ -1.22
CPSF7-222ENST00000544585 AHI1Q8N157 1196 aa7.46□□□□□ -1.22
CPSF7-222ENST00000544585 PPM1KQ8N3J5 372 aa7.46□□□□□ -1.22
CPSF7-222ENST00000544585 CRACR2BQ8N4Y2 399 aaPredicted RBP7.46□□□□□ -1.22
CPSF7-222ENST00000544585 DTWD1Q8N5C7 304 aa7.46□□□□□ -1.22
CPSF7-222ENST00000544585 BVESQ8NE79 360 aa7.46□□□□□ -1.22
CPSF7-222ENST00000544585 WDR66Q8TBY9 1149 aa7.46□□□□□ -1.22
CPSF7-222ENST00000544585 TSR2Q969E8 191 aaKnown RBP7.46□□□□□ -1.22
CPSF7-222ENST00000544585 ACDQ96AP0 544 aa7.46□□□□□ -1.22
CPSF7-222ENST00000544585 BTBD6Q96KE9 485 aa7.46□□□□□ -1.22
CPSF7-222ENST00000544585 ZNF512BQ96KM6 892 aaPredicted RBP7.46□□□□□ -1.22
CPSF7-222ENST00000544585 CYP4F12Q9HCS2 524 aa7.46□□□□□ -1.22
CPSF7-222ENST00000544585 MTMR10Q9NXD2 777 aa7.46□□□□□ -1.22
CPSF7-222ENST00000544585 CENPFP49454 3210 aa7.46□□□□□ -1.22
CPSF7-222ENST00000544585 MYH3P11055 1940 aa7.45□□□□□ -1.22
CPSF7-222ENST00000544585 RNGTTO60942 597 aaKnown RBP7.45□□□□□ -1.22
CPSF7-222ENST00000544585 DEAF1O75398 565 aaPredicted RBP7.45□□□□□ -1.22
CPSF7-222ENST00000544585 PDE8BO95263 885 aa7.45□□□□□ -1.22
CPSF7-222ENST00000544585 ZEB1P37275 1124 aaPredicted RBP7.45□□□□□ -1.22
CPSF7-222ENST00000544585 CAP2P40123 477 aa7.45□□□□□ -1.22
CPSF7-222ENST00000544585 SLBPQ14493 270 aaKnown RBP eCLIP7.45□□□□□ -1.22
CPSF7-222ENST00000544585 EPHA10Q5JZY3 1008 aa7.45□□□□□ -1.22
CPSF7-222ENST00000544585 RNFT1Q5M7Z0 435 aa7.45□□□□□ -1.22
CPSF7-222ENST00000544585 POMZP3Q6PJE2 187 aa7.45□□□□□ -1.22
CPSF7-222ENST00000544585 TDHQ8IZJ6 230 aa7.45□□□□□ -1.22
CPSF7-222ENST00000544585 TMPRSS13Q9BYE2 586 aa7.45□□□□□ -1.22
CPSF7-222ENST00000544585 PUS3Q9BZE2 481 aaKnown RBP7.45□□□□□ -1.22
CPSF7-222ENST00000544585 WHRNQ9P202 907 aa7.45□□□□□ -1.22
CPSF7-222ENST00000544585 ZHX2Q9Y6X8 837 aa7.45□□□□□ -1.22
CPSF7-222ENST00000544585 IL16Q14005 1332 aa7.45□□□□□ -1.22
CPSF7-222ENST00000544585 RPTORQ8N122 1335 aa7.45□□□□□ -1.22
CPSF7-222ENST00000544585 RPAP1Q9BWH6 1393 aaPredicted RBP7.45□□□□□ -1.22
CPSF7-222ENST00000544585 ECM29Q5VYK3 1845 aa7.44□□□□□ -1.22
CPSF7-222ENST00000544585 A0A0G2JLL6 359 aaPredicted RBP7.44□□□□□ -1.22
CPSF7-222ENST00000544585 MEGF11A6BM72 1044 aa7.44□□□□□ -1.22
CPSF7-222ENST00000544585 CTNND1O60716 968 aaKnown RBP7.44□□□□□ -1.22
CPSF7-222ENST00000544585 IFIT1P09914 478 aaKnown RBP7.44□□□□□ -1.22
CPSF7-222ENST00000544585 NID1P14543 1247 aa7.44□□□□□ -1.22
CPSF7-222ENST00000544585 ELNP15502 786 aa7.44□□□□□ -1.22
CPSF7-222ENST00000544585 SDSP20132 328 aa7.44□□□□□ -1.22
CPSF7-222ENST00000544585 CD247P20963 164 aa7.44□□□□□ -1.22
CPSF7-222ENST00000544585 GUCY2FP51841 1108 aa7.44□□□□□ -1.22
CPSF7-222ENST00000544585 ANKRD39Q53RE8 183 aa7.44□□□□□ -1.22
CPSF7-222ENST00000544585 METTL24Q5JXM2 366 aa7.44□□□□□ -1.22
CPSF7-222ENST00000544585 FAM109BQ6ICB4 259 aaPredicted RBP7.44□□□□□ -1.22
CPSF7-222ENST00000544585 CDC42EP5Q6NZY7 148 aa7.44□□□□□ -1.22
CPSF7-222ENST00000544585 DYMQ7RTS9 669 aa7.44□□□□□ -1.22
CPSF7-222ENST00000544585 PRRT2Q7Z6L0 340 aaPredicted RBP7.44□□□□□ -1.22
CPSF7-222ENST00000544585 NPAS3Q8IXF0 933 aa7.44□□□□□ -1.22
CPSF7-222ENST00000544585 SCYL3Q8IZE3 742 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms