RNA–Protein interactions for RNA: ENST00000540783.5

RAPGEF4-215, Transcript of Rap guanine nucleotide exchange factor 4, human

TSL 2 BASIC

Gene RAPGEF4, Length 3,974 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAPGEF4-215	ENST00000540783	SALL4	Q9UJQ4	1053 aa		6.21	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	DDX52	Q9Y2R4	599 aa	Known RBP eCLIP	6.21	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	MYH3	P11055	1940 aa		6.21	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	EPHB6	O15197	1021 aa		6.21	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	KRT18	P05783	430 aa	Known RBP	6.21	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	GLI1	P08151	1106 aa		6.21	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	DSG3	P32926	999 aa		6.21	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	GSC	P56915	257 aa	Predicted RBP	6.21	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	ATP2C1	P98194	919 aa	Predicted RBP	6.21	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	SET	Q01105	290 aa	Predicted RBP	6.21	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	GUCY2D	Q02846	1103 aa		6.21	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	FAM110C	Q1W6H9	321 aa		6.21	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	TMEM132A	Q24JP5	1023 aa		6.21	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	HAUS3	Q68CZ6	603 aa		6.21	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	XRRA1	Q6P2D8	792 aa		6.21	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	GBP6	Q6ZN66	633 aa		6.21	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	POTED	Q86YR6	584 aa		6.21	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	KIRREL3	Q8IZU9	778 aa		6.21	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	EHBP1	Q8NDI1	1231 aa		6.21	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	CABS1	Q96KC9	395 aa		6.21	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	RPGRIP1	Q96KN7	1286 aa		6.21	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	C12orf42	Q96LP6	360 aa		6.21	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	OSBPL9	Q96SU4	736 aa		6.21	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	IFIH1	Q9BYX4	1025 aa	Known RBP	6.21	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	LRRC27	Q9C0I9	530 aa		6.21	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	EPB41L5	Q9HCM4	733 aa		6.21	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	EXOC1	Q9NV70	894 aa		6.21	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	SUFU	Q9UMX1	484 aa		6.21	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	SNCAIP	Q9Y6H5	919 aa		6.21	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	FRMD3	A2A2Y4	597 aa		6.2	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	SMCO2	A6NFE2	343 aa		6.2	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	MEFV	O15553	781 aa	Predicted RBP	6.2	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	HOXC6	P09630	235 aa		6.2	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	LSP1	P33241	339 aa		6.2	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	FNTA	P49354	379 aa		6.2	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	PSEN1	P49768	467 aa		6.2	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	NPY5R	Q15761	445 aa		6.2	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	CFAP58	Q5T655	872 aa		6.2	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	C8orf74	Q6P047	294 aa		6.2	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	CEP57	Q86XR8	500 aa		6.2	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	ZFPM1	Q8IX07	1006 aa		6.2	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	SCLT1	Q96NL6	688 aa		6.2	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	NOC4L	Q9BVI4	516 aa	Known RBP	6.2	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	MMRN2	Q9H8L6	949 aa		6.2	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	RAVER2	Q9HCJ3	691 aa	Known RBP	6.2	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	SH3GLB2	Q9NR46	395 aa		6.2	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	SAGE1	Q9NXZ1	904 aa		6.2	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	STIM2	Q9P246	746 aa		6.2	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	TRIM17	Q9Y577	477 aa		6.2	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	ASTN2	O75129	1339 aa	Predicted RBP	6.2	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	IRS2	Q9Y4H2	1338 aa		6.2	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	SLC15A5	A6NIM6	579 aa		6.2	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	ZNF233	A6NK53	670 aa		6.2	□□□□□ -1.42
RAPGEF4-215	ENST00000540783		E7EVH7	732 aa		6.2	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	AKR1B10	O60218	316 aa		6.2	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	MSC	O60682	206 aa		6.2	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	TACC1	O75410	805 aa		6.2	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	GCFC2	P16383	781 aa	Known RBP	6.2	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	SCP2	P22307	547 aa		6.2	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	EIF4A3	P38919	411 aa	Known RBP	6.2	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	VAV2	P52735	878 aa		6.2	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	STXBP2	Q15833	593 aa		6.2	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	NAA35	Q5VZE5	725 aa		6.2	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	IQCE	Q6IPM2	695 aa		6.2	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	MAATS1	Q7Z4T9	603 aa		6.2	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	IFNL1	Q8IU54	200 aa		6.2	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	CNPY4	Q8N129	248 aa		6.2	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	MMGT1	Q8N4V1	131 aa		6.2	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	BANK1	Q8NDB2	785 aa		6.2	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	OR2W6P	Q8NHA6	318 aa		6.2	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	ACER1	Q8TDN7	264 aa		6.2	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	ANKS1A	Q92625	1134 aa		6.2	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	GPKOW	Q92917	476 aa	Predicted RBP eCLIP	6.2	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	CLMN	Q96JQ2	1002 aa		6.2	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	PACSIN2	Q9UNF0	486 aa	Predicted RBP	6.2	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	PCDHA13	Q9Y5I0	950 aa		6.2	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	ROBO3	Q96MS0	1386 aa		6.2	□□□□□ -1.42
RAPGEF4-215	ENST00000540783		A0A0G2JLL6	359 aa	Predicted RBP	6.2	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	FAM170A	A1A519	330 aa		6.2	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	PRPF3	O43395	683 aa	Known RBP	6.2	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	PLA2G6	O60733	806 aa		6.2	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	GOLGA8H	P0CJ92	632 aa		6.2	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	USP8	P40818	1118 aa		6.2	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	PSMC4	P43686	418 aa		6.2	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	DNM2	P50570	870 aa		6.2	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	GABPA	Q06546	454 aa		6.2	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	SH3D19	Q5HYK7	790 aa		6.2	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	ANKRD40	Q6AI12	368 aa		6.2	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	TMTC3	Q6ZXV5	915 aa		6.2	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	MOB2	Q70IA6	237 aa		6.2	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	PRRT2	Q7Z6L0	340 aa	Predicted RBP	6.2	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	ZNF473	Q8WTR7	871 aa	Known RBP	6.2	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	CNOT6L	Q96LI5	555 aa	Known RBP	6.2	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	BCCIP	Q9P287	314 aa	Known RBP eCLIP	6.2	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	CPA4	Q9UI42	421 aa		6.2	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	KCNG1	Q9UIX4	513 aa		6.2	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	PCDHAC2	Q9Y5I4	1007 aa		6.2	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	TNRC6C	Q9HCJ0	1690 aa	Known RBP	6.2	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	NRXN2	Q9P2S2	1712 aa		6.19	□□□□□ -1.42
RAPGEF4-215	ENST00000540783	PSMA7	O14818	248 aa		6.19	□□□□□ -1.42

Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms