RNA–Protein interactions for RNA: ENST00000540428.1

CBX3P4-202, Transcript of chromobox 3 pseudogene 4, humanhuman

TSL 2 BASIC

Gene CBX3P4, Length 423 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P4-202ENST00000540428 PCDHB7Q9Y5E2 793 aa13.66□□□□□ -0.22
CBX3P4-202ENST00000540428 KLF18A0A0U1RQI7 1052 aa13.65□□□□□ -0.22
CBX3P4-202ENST00000540428 CCDC196A0A1B0GTZ2 297 aa13.65□□□□□ -0.22
CBX3P4-202ENST00000540428 ESYT2A0FGR8 921 aa13.65□□□□□ -0.22
CBX3P4-202ENST00000540428 FSD2A1L4K1 749 aa13.65□□□□□ -0.22
CBX3P4-202ENST00000540428 FAM86B1E9PN63 330 aa13.65□□□□□ -0.22
CBX3P4-202ENST00000540428 IPO5O00410 1097 aaKnown RBP13.65□□□□□ -0.22
CBX3P4-202ENST00000540428 GPR182O15218 404 aa13.65□□□□□ -0.22
CBX3P4-202ENST00000540428 DHX15O43143 795 aaKnown RBP13.65□□□□□ -0.22
CBX3P4-202ENST00000540428 RPS6KA5O75582 802 aa13.65□□□□□ -0.22
CBX3P4-202ENST00000540428 FAM86B2P0C5J1 330 aa13.65□□□□□ -0.22
CBX3P4-202ENST00000540428 DNAJB1P25685 340 aa13.65□□□□□ -0.22
CBX3P4-202ENST00000540428 NDUFV1P49821 464 aa13.65□□□□□ -0.22
CBX3P4-202ENST00000540428 SETQ01105 290 aaPredicted RBP13.65□□□□□ -0.22
CBX3P4-202ENST00000540428 PFKFB3Q16875 520 aaPredicted RBP13.65□□□□□ -0.22
CBX3P4-202ENST00000540428 PAN2Q504Q3 1202 aaKnown RBP13.65□□□□□ -0.22
CBX3P4-202ENST00000540428 HERC4Q5GLZ8 1057 aaPredicted RBP13.65□□□□□ -0.22
CBX3P4-202ENST00000540428 PDXDC2PQ6P474 469 aa13.65□□□□□ -0.22
CBX3P4-202ENST00000540428 SLC24A5Q71RS6 500 aa13.65□□□□□ -0.22
CBX3P4-202ENST00000540428 PLA2G4DQ86XP0 818 aa13.65□□□□□ -0.22
CBX3P4-202ENST00000540428 CCDC60Q8IWA6 550 aaPredicted RBP13.65□□□□□ -0.22
CBX3P4-202ENST00000540428 POF1BQ8WVV4 589 aa13.65□□□□□ -0.22
CBX3P4-202ENST00000540428 AAASQ9NRG9 546 aa13.65□□□□□ -0.22
CBX3P4-202ENST00000540428 RGS18Q9NS28 235 aa13.65□□□□□ -0.22
CBX3P4-202ENST00000540428 TBC1D22BQ9NU19 505 aa13.65□□□□□ -0.22
CBX3P4-202ENST00000540428 MYO7AQ13402 2215 aa13.64□□□□□ -0.23
CBX3P4-202ENST00000540428 IGLV3-22A0A075B6J6 115 aa13.64□□□□□ -0.23
CBX3P4-202ENST00000540428 DDX39AO00148 427 aaKnown RBP13.64□□□□□ -0.23
CBX3P4-202ENST00000540428 LINC01565O15544 149 aa13.64□□□□□ -0.23
CBX3P4-202ENST00000540428 CDC27P30260 824 aa13.64□□□□□ -0.23
CBX3P4-202ENST00000540428 COASYQ13057 564 aa13.64□□□□□ -0.23
CBX3P4-202ENST00000540428 CLUL1Q15846 466 aa13.64□□□□□ -0.23
CBX3P4-202ENST00000540428 TMEM266Q2M3C6 531 aa13.64□□□□□ -0.23
CBX3P4-202ENST00000540428 ADCK5Q3MIX3 580 aa13.64□□□□□ -0.23
CBX3P4-202ENST00000540428 ZNF746Q6NUN9 644 aaPredicted RBP13.64□□□□□ -0.23
CBX3P4-202ENST00000540428 ADGRD2Q7Z7M1 963 aa13.64□□□□□ -0.23
CBX3P4-202ENST00000540428 SMAP1Q8IYB5 467 aaPredicted RBP13.64□□□□□ -0.23
CBX3P4-202ENST00000540428 RASEFQ8IZ41 740 aa13.64□□□□□ -0.23
CBX3P4-202ENST00000540428 SMRP1Q8NCR6 262 aa13.64□□□□□ -0.23
CBX3P4-202ENST00000540428 CCDC12Q8WUD4 166 aaPredicted RBP13.64□□□□□ -0.23
CBX3P4-202ENST00000540428 TMEM40Q8WWA1 233 aa13.64□□□□□ -0.23
CBX3P4-202ENST00000540428 BBXQ8WY36 941 aaPredicted RBP13.64□□□□□ -0.23
CBX3P4-202ENST00000540428 TCEANC2Q96MN5 208 aa13.64□□□□□ -0.23
CBX3P4-202ENST00000540428 UIMC1Q96RL1 719 aa13.64□□□□□ -0.23
CBX3P4-202ENST00000540428 ZMYND12Q9H0C1 365 aa13.64□□□□□ -0.23
CBX3P4-202ENST00000540428 ELAC1Q9H777 363 aaKnown RBP13.64□□□□□ -0.23
CBX3P4-202ENST00000540428 CLEC1BQ9P126 229 aa13.64□□□□□ -0.23
CBX3P4-202ENST00000540428 ST3GAL5Q9UNP4 418 aa13.64□□□□□ -0.23
CBX3P4-202ENST00000540428 CEP131Q9UPN4 1083 aa13.64□□□□□ -0.23
CBX3P4-202ENST00000540428 GINS2Q9Y248 185 aa13.64□□□□□ -0.23
CBX3P4-202ENST00000540428 NOC2LQ9Y3T9 749 aaKnown RBP13.64□□□□□ -0.23
CBX3P4-202ENST00000540428 PCDHB12Q9Y5F1 795 aa13.64□□□□□ -0.23
CBX3P4-202ENST00000540428 MAFBQ9Y5Q3 323 aaPredicted RBP13.64□□□□□ -0.23
CBX3P4-202ENST00000540428 DENND3A2RUS2 1198 aa13.63□□□□□ -0.23
CBX3P4-202ENST00000540428 ZBTB42B2RXF5 422 aa13.63□□□□□ -0.23
CBX3P4-202ENST00000540428 C9IYK1 514 aa13.63□□□□□ -0.23
CBX3P4-202ENST00000540428 MGEA5O60502 916 aa13.63□□□□□ -0.23
CBX3P4-202ENST00000540428 CSPG5O95196 566 aa13.63□□□□□ -0.23
CBX3P4-202ENST00000540428 C22orf31O95567 290 aa13.63□□□□□ -0.23
CBX3P4-202ENST00000540428 ATP4AP20648 1035 aa13.63□□□□□ -0.23
CBX3P4-202ENST00000540428 GATMP50440 423 aa13.63□□□□□ -0.23
CBX3P4-202ENST00000540428 CRYBB1P53674 252 aaPredicted RBP13.63□□□□□ -0.23
CBX3P4-202ENST00000540428 JAKMIP3Q5VZ66 844 aa13.63□□□□□ -0.23
CBX3P4-202ENST00000540428 PDE12Q6L8Q7 609 aaKnown RBP13.63□□□□□ -0.23
CBX3P4-202ENST00000540428 SWSAP1Q6NVH7 229 aa13.63□□□□□ -0.23
CBX3P4-202ENST00000540428 ZNF710Q8N1W2 664 aa13.63□□□□□ -0.23
CBX3P4-202ENST00000540428 CDCA3Q99618 268 aaPredicted RBP13.63□□□□□ -0.23
CBX3P4-202ENST00000540428 ADAM2Q99965 735 aa13.63□□□□□ -0.23
CBX3P4-202ENST00000540428 ZNF577Q9BSK1 485 aa13.63□□□□□ -0.23
CBX3P4-202ENST00000540428 CDHR5Q9HBB8 845 aa13.63□□□□□ -0.23
CBX3P4-202ENST00000540428 C6orf50Q9HD87 102 aa13.63□□□□□ -0.23
CBX3P4-202ENST00000540428 MAGEB2O15479 319 aa13.62□□□□□ -0.23
CBX3P4-202ENST00000540428 PSAPP07602 524 aa13.62□□□□□ -0.23
CBX3P4-202ENST00000540428 GNA11P29992 359 aa13.62□□□□□ -0.23
CBX3P4-202ENST00000540428 CIITAP33076 1130 aa13.62□□□□□ -0.23
CBX3P4-202ENST00000540428 ADD1P35611 737 aaKnown RBP13.62□□□□□ -0.23
CBX3P4-202ENST00000540428 NRIP1P48552 1158 aa13.62□□□□□ -0.23
CBX3P4-202ENST00000540428 METAP2P50579 478 aaKnown RBP eCLIP13.62□□□□□ -0.23
CBX3P4-202ENST00000540428 FAM189BP81408 668 aa13.62□□□□□ -0.23
CBX3P4-202ENST00000540428 RNF135Q8IUD6 432 aa13.62□□□□□ -0.23
CBX3P4-202ENST00000540428 CKAP2LQ8IYA6 745 aa13.62□□□□□ -0.23
CBX3P4-202ENST00000540428 REXO1Q8N1G1 1221 aaKnown RBP13.62□□□□□ -0.23
CBX3P4-202ENST00000540428 TLR9Q9NR96 1032 aa13.62□□□□□ -0.23
CBX3P4-202ENST00000540428 TMEM161AQ9NX61 479 aa13.62□□□□□ -0.23
CBX3P4-202ENST00000540428 TCEAL9Q9UHQ7 104 aa13.62□□□□□ -0.23
CBX3P4-202ENST00000540428 MUTYHQ9UIF7 546 aa13.62□□□□□ -0.23
CBX3P4-202ENST00000540428 PCDHA10Q9Y5I2 948 aa13.62□□□□□ -0.23
CBX3P4-202ENST00000540428 ATG2AQ2TAZ0 1938 aa13.62□□□□□ -0.23
CBX3P4-202ENST00000540428 NID2Q14112 1375 aa13.61□□□□□ -0.23
CBX3P4-202ENST00000540428 TBKBP1A7MCY6 615 aa13.61□□□□□ -0.23
CBX3P4-202ENST00000540428 LOC730098B7Z3J9 87 aa13.61□□□□□ -0.23
CBX3P4-202ENST00000540428 GPR32O75388 356 aa13.61□□□□□ -0.23
CBX3P4-202ENST00000540428 CDC45O75419 566 aa13.61□□□□□ -0.23
CBX3P4-202ENST00000540428 FGF18O76093 207 aa13.61□□□□□ -0.23
CBX3P4-202ENST00000540428 GLP2RO95838 553 aa13.61□□□□□ -0.23
CBX3P4-202ENST00000540428 FGD1P98174 961 aa13.61□□□□□ -0.23
CBX3P4-202ENST00000540428 CBX2Q14781 532 aaPredicted RBP13.61□□□□□ -0.23
CBX3P4-202ENST00000540428 KIZQ2M2Z5 673 aa13.61□□□□□ -0.23
CBX3P4-202ENST00000540428 SPOUT1Q5T280 376 aaKnown RBP13.61□□□□□ -0.23
CBX3P4-202ENST00000540428 FAM102BQ5T8I3 360 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms