RNA–Protein interactions for RNA: ENST00000527027.1

PTPRU-210, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 3

Gene PTPRU, Length 619 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-210ENST00000527027 NOC2LQ9Y3T9 749 aaKnown RBP18.36■□□□□ 0.53
PTPRU-210ENST00000527027 PCDHGC5Q9Y5F6 944 aa18.36■□□□□ 0.53
PTPRU-210ENST00000527027 ZNF318Q5VUA4 2279 aa18.35■□□□□ 0.53
PTPRU-210ENST00000527027 DENND3A2RUS2 1198 aa18.35■□□□□ 0.53
PTPRU-210ENST00000527027 TBKBP1A7MCY6 615 aa18.35■□□□□ 0.53
PTPRU-210ENST00000527027 BACH1O14867 736 aa18.35■□□□□ 0.53
PTPRU-210ENST00000527027 MGEA5O60502 916 aa18.35■□□□□ 0.53
PTPRU-210ENST00000527027 SPOUT1Q5T280 376 aaKnown RBP18.35■□□□□ 0.53
PTPRU-210ENST00000527027 FAM160B1Q5W0V3 765 aa18.35■□□□□ 0.53
PTPRU-210ENST00000527027 PPP1R18Q6NYC8 613 aa18.35■□□□□ 0.53
PTPRU-210ENST00000527027 ABHD15Q6UXT9 468 aa18.35■□□□□ 0.53
PTPRU-210ENST00000527027 SLC24A5Q71RS6 500 aa18.35■□□□□ 0.53
PTPRU-210ENST00000527027 ATP8B4Q8TF62 1192 aa18.35■□□□□ 0.53
PTPRU-210ENST00000527027 PBXIP1Q96AQ6 731 aa18.35■□□□□ 0.53
PTPRU-210ENST00000527027 ADAM2Q99965 735 aa18.35■□□□□ 0.53
PTPRU-210ENST00000527027 RGS18Q9NS28 235 aa18.35■□□□□ 0.53
PTPRU-210ENST00000527027 C1orf112Q9NSG2 853 aa18.35■□□□□ 0.53
PTPRU-210ENST00000527027 RBM28Q9NW13 759 aaKnown RBP18.35■□□□□ 0.53
PTPRU-210ENST00000527027 USP15Q9Y4E8 981 aaPredicted RBP18.35■□□□□ 0.53
PTPRU-210ENST00000527027 TECTAO75443 2155 aa18.35■□□□□ 0.53
PTPRU-210ENST00000527027 SMCO2A6NFE2 343 aa18.34■□□□□ 0.53
PTPRU-210ENST00000527027 TMEM221A6NGB7 291 aa18.34■□□□□ 0.53
PTPRU-210ENST00000527027 M0R296 226 aa18.34■□□□□ 0.53
PTPRU-210ENST00000527027 GPR182O15218 404 aa18.34■□□□□ 0.53
PTPRU-210ENST00000527027 CCNE2O96020 404 aa18.34■□□□□ 0.53
PTPRU-210ENST00000527027 ZNF76P36508 570 aa18.34■□□□□ 0.53
PTPRU-210ENST00000527027 SREBF1P36956 1147 aa18.34■□□□□ 0.53
PTPRU-210ENST00000527027 ADCY7P51828 1080 aa18.34■□□□□ 0.53
PTPRU-210ENST00000527027 ZXDAP98168 799 aa18.34■□□□□ 0.53
PTPRU-210ENST00000527027 PKN1Q16512 942 aa18.34■□□□□ 0.53
PTPRU-210ENST00000527027 ZNF484Q5JVG2 852 aa18.34■□□□□ 0.53
PTPRU-210ENST00000527027 FAM102BQ5T8I3 360 aa18.34■□□□□ 0.53
PTPRU-210ENST00000527027 APOA5Q6Q788 366 aa18.34■□□□□ 0.53
PTPRU-210ENST00000527027 NIPA1Q7RTP0 329 aa18.34■□□□□ 0.53
PTPRU-210ENST00000527027 CDCA3Q99618 268 aaPredicted RBP18.34■□□□□ 0.53
PTPRU-210ENST00000527027 ESYT1Q9BSJ8 1104 aa18.34■□□□□ 0.53
PTPRU-210ENST00000527027 PHF7Q9BWX1 381 aaPredicted RBP18.34■□□□□ 0.53
PTPRU-210ENST00000527027 GLT8D2Q9H1C3 349 aa18.34■□□□□ 0.53
PTPRU-210ENST00000527027 TLR9Q9NR96 1032 aa18.34■□□□□ 0.53
PTPRU-210ENST00000527027 ST3GAL5Q9UNP4 418 aa18.34■□□□□ 0.53
PTPRU-210ENST00000527027 V9GY48 417 aaPredicted RBP18.34■□□□□ 0.53
PTPRU-210ENST00000527027 COL1A2P08123 1366 aa18.33■□□□□ 0.53
PTPRU-210ENST00000527027 CNTNAP5Q8WYK1 1306 aa18.33■□□□□ 0.53
PTPRU-210ENST00000527027 C9IYK1 514 aa18.33■□□□□ 0.52
PTPRU-210ENST00000527027 PER2O15055 1255 aa18.33■□□□□ 0.52
PTPRU-210ENST00000527027 FGF18O76093 207 aa18.33■□□□□ 0.52
PTPRU-210ENST00000527027 ERVFC1P60507 584 aa18.33■□□□□ 0.52
PTPRU-210ENST00000527027 FUT2Q10981 343 aa18.33■□□□□ 0.52
PTPRU-210ENST00000527027 AP3B2Q13367 1082 aa18.33■□□□□ 0.52
PTPRU-210ENST00000527027 PDE12Q6L8Q7 609 aaKnown RBP18.33■□□□□ 0.52
PTPRU-210ENST00000527027 PDXDC2PQ6P474 469 aa18.33■□□□□ 0.52
PTPRU-210ENST00000527027 TMEM40Q8WWA1 233 aa18.33■□□□□ 0.52
PTPRU-210ENST00000527027 ZNF302Q9NR11 478 aa18.33■□□□□ 0.52
PTPRU-210ENST00000527027 TYW1Q9NV66 732 aaKnown RBP18.33■□□□□ 0.52
PTPRU-210ENST00000527027 TMEM260Q9NX78 707 aa18.33■□□□□ 0.52
PTPRU-210ENST00000527027 FSD2A1L4K1 749 aa18.32■□□□□ 0.52
PTPRU-210ENST00000527027 hCG_1984214I3L0E3 225 aa18.32■□□□□ 0.52
PTPRU-210ENST00000527027 DDX39AO00148 427 aaKnown RBP18.32■□□□□ 0.52
PTPRU-210ENST00000527027 ATF7P17544 494 aaPredicted RBP18.32■□□□□ 0.52
PTPRU-210ENST00000527027 CRYBB1P53674 252 aaPredicted RBP18.32■□□□□ 0.52
PTPRU-210ENST00000527027 FAM189BP81408 668 aa18.32■□□□□ 0.52
PTPRU-210ENST00000527027 DUSP6Q16828 381 aa18.32■□□□□ 0.52
PTPRU-210ENST00000527027 SWSAP1Q6NVH7 229 aa18.32■□□□□ 0.52
PTPRU-210ENST00000527027 MIS18BP1Q6P0N0 1132 aa18.32■□□□□ 0.52
PTPRU-210ENST00000527027 CCDC60Q8IWA6 550 aaPredicted RBP18.32■□□□□ 0.52
PTPRU-210ENST00000527027 ZNF713Q8N859 430 aaPredicted RBP18.32■□□□□ 0.52
PTPRU-210ENST00000527027 RPGRIP1Q96KN7 1286 aa18.32■□□□□ 0.52
PTPRU-210ENST00000527027 BARHL2Q9NY43 387 aa18.32■□□□□ 0.52
PTPRU-210ENST00000527027 ZBTB42B2RXF5 422 aa18.31■□□□□ 0.52
PTPRU-210ENST00000527027 DHX15O43143 795 aaKnown RBP18.31■□□□□ 0.52
PTPRU-210ENST00000527027 ATP4AP20648 1035 aa18.31■□□□□ 0.52
PTPRU-210ENST00000527027 CLK2P49760 499 aaKnown RBP18.31■□□□□ 0.52
PTPRU-210ENST00000527027 RBM10P98175 930 aaKnown RBP18.31■□□□□ 0.52
PTPRU-210ENST00000527027 EXOSC10Q01780 885 aaKnown RBP18.31■□□□□ 0.52
PTPRU-210ENST00000527027 RTN1Q16799 776 aa18.31■□□□□ 0.52
PTPRU-210ENST00000527027 KIZQ2M2Z5 673 aa18.31■□□□□ 0.52
PTPRU-210ENST00000527027 PLA2G4DQ86XP0 818 aa18.31■□□□□ 0.52
PTPRU-210ENST00000527027 THNSL1Q8IYQ7 743 aa18.31■□□□□ 0.52
PTPRU-210ENST00000527027 COLGALT1Q8NBJ5 622 aa18.31■□□□□ 0.52
PTPRU-210ENST00000527027 VN1R2Q8NFZ6 395 aa18.31■□□□□ 0.52
PTPRU-210ENST00000527027 SUSD6Q92537 303 aa18.31■□□□□ 0.52
PTPRU-210ENST00000527027 NEK1Q96PY6 1258 aa18.31■□□□□ 0.52
PTPRU-210ENST00000527027 PRRX2Q99811 253 aa18.31■□□□□ 0.52
PTPRU-210ENST00000527027 ELAC1Q9H777 363 aaKnown RBP18.31■□□□□ 0.52
PTPRU-210ENST00000527027 ATP6V0A4Q9HBG4 840 aa18.31■□□□□ 0.52
PTPRU-210ENST00000527027 ANO2Q9NQ90 1003 aa18.31■□□□□ 0.52
PTPRU-210ENST00000527027 TMEM161AQ9NX61 479 aa18.31■□□□□ 0.52
PTPRU-210ENST00000527027 BRPF3Q9ULD4 1205 aa18.31■□□□□ 0.52
PTPRU-210ENST00000527027 FAM86B1E9PN63 330 aa18.3■□□□□ 0.52
PTPRU-210ENST00000527027 IPO5O00410 1097 aaKnown RBP18.3■□□□□ 0.52
PTPRU-210ENST00000527027 FSCN2O14926 492 aa18.3■□□□□ 0.52
PTPRU-210ENST00000527027 ZBTB43O43298 467 aa18.3■□□□□ 0.52
PTPRU-210ENST00000527027 FAM86B2P0C5J1 330 aa18.3■□□□□ 0.52
PTPRU-210ENST00000527027 PTPN5P54829 565 aa18.3■□□□□ 0.52
PTPRU-210ENST00000527027 IER5LQ5T953 404 aa18.3■□□□□ 0.52
PTPRU-210ENST00000527027 RNF20Q5VTR2 975 aa18.3■□□□□ 0.52
PTPRU-210ENST00000527027 TMEM184AQ6ZMB5 413 aa18.3■□□□□ 0.52
PTPRU-210ENST00000527027 FAM228AQ86W67 206 aa18.3■□□□□ 0.52
PTPRU-210ENST00000527027 SUGP1Q8IWZ8 645 aaKnown RBP18.3■□□□□ 0.52
PTPRU-210ENST00000527027 CKAP2LQ8IYA6 745 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms