RNA–Protein interactions for RNA: ENST00000509409.5

TPM3-219, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 1,248 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-219ENST00000509409 H3BQ06 376 aaPredicted RBP17.43■□□□□ 0.38
TPM3-219ENST00000509409 GRM6O15303 877 aa17.43■□□□□ 0.38
TPM3-219ENST00000509409 ATP4AP20648 1035 aa17.43■□□□□ 0.38
TPM3-219ENST00000509409 SSRP1Q08945 709 aaKnown RBP17.43■□□□□ 0.38
TPM3-219ENST00000509409 NTRK3Q16288 839 aa17.43■□□□□ 0.38
TPM3-219ENST00000509409 ODR4Q5SWX8 454 aa17.43■□□□□ 0.38
TPM3-219ENST00000509409 RUFY3Q7L099 469 aa17.43■□□□□ 0.38
TPM3-219ENST00000509409 SMAP1Q8IYB5 467 aaPredicted RBP17.43■□□□□ 0.38
TPM3-219ENST00000509409 TRIM22Q8IYM9 498 aa17.43■□□□□ 0.38
TPM3-219ENST00000509409 BBXQ8WY36 941 aaPredicted RBP17.43■□□□□ 0.38
TPM3-219ENST00000509409 CLP1Q92989 425 aaKnown RBP17.43■□□□□ 0.38
TPM3-219ENST00000509409 PPP1R16BQ96T49 567 aa17.43■□□□□ 0.38
TPM3-219ENST00000509409 LMAN2LQ9H0V9 348 aa17.43■□□□□ 0.38
TPM3-219ENST00000509409 CDHR5Q9HBB8 845 aa17.43■□□□□ 0.38
TPM3-219ENST00000509409 NOC2LQ9Y3T9 749 aaKnown RBP17.43■□□□□ 0.38
TPM3-219ENST00000509409 PCDHB7Q9Y5E2 793 aa17.43■□□□□ 0.38
TPM3-219ENST00000509409 CYP46A1Q9Y6A2 500 aa17.43■□□□□ 0.38
TPM3-219ENST00000509409 KDM3AQ9Y4C1 1321 aa17.43■□□□□ 0.38
TPM3-219ENST00000509409 NID2Q14112 1375 aa17.42■□□□□ 0.38
TPM3-219ENST00000509409 DENND3A2RUS2 1198 aa17.42■□□□□ 0.38
TPM3-219ENST00000509409 CPLX1O14810 134 aa17.42■□□□□ 0.38
TPM3-219ENST00000509409 NCK2O43639 380 aa17.42■□□□□ 0.38
TPM3-219ENST00000509409 CIITAP33076 1130 aa17.42■□□□□ 0.38
TPM3-219ENST00000509409 PUS10Q3MIT2 529 aaKnown RBP17.42■□□□□ 0.38
TPM3-219ENST00000509409 CMTR2Q8IYT2 770 aaKnown RBP17.42■□□□□ 0.38
TPM3-219ENST00000509409 PABPC5Q96DU9 382 aaKnown RBP17.42■□□□□ 0.38
TPM3-219ENST00000509409 LARP6Q9BRS8 491 aaKnown RBP17.42■□□□□ 0.38
TPM3-219ENST00000509409 PLVAPQ9BX97 442 aa17.42■□□□□ 0.38
TPM3-219ENST00000509409 TMX1Q9H3N1 280 aa17.42■□□□□ 0.38
TPM3-219ENST00000509409 IGFLR1Q9H665 355 aa17.42■□□□□ 0.38
TPM3-219ENST00000509409 EPHX3Q9H6B9 360 aa17.42■□□□□ 0.38
TPM3-219ENST00000509409 RC3H2Q9HBD1 1191 aaKnown RBP17.42■□□□□ 0.38
TPM3-219ENST00000509409 ALG13Q9NP73 1137 aaKnown RBP17.42■□□□□ 0.38
TPM3-219ENST00000509409 CLDND1Q9NY35 253 aa17.42■□□□□ 0.38
TPM3-219ENST00000509409 MAFBQ9Y5Q3 323 aaPredicted RBP17.42■□□□□ 0.38
TPM3-219ENST00000509409 MRPL42Q9Y6G3 142 aaKnown RBP17.42■□□□□ 0.38
TPM3-219ENST00000509409 SIP14410 1827 aa17.42■□□□□ 0.38
TPM3-219ENST00000509409 GPR182O15218 404 aa17.41■□□□□ 0.38
TPM3-219ENST00000509409 SSTR3P32745 418 aaPredicted RBP17.41■□□□□ 0.38
TPM3-219ENST00000509409 KIZQ2M2Z5 673 aa17.41■□□□□ 0.38
TPM3-219ENST00000509409 SPOUT1Q5T280 376 aaKnown RBP17.41■□□□□ 0.38
TPM3-219ENST00000509409 ADAM2Q99965 735 aa17.41■□□□□ 0.38
TPM3-219ENST00000509409 ZSWIM6Q9HCJ5 1215 aa17.41■□□□□ 0.38
TPM3-219ENST00000509409 ERVK-5Q9HDB9 667 aa17.41■□□□□ 0.38
TPM3-219ENST00000509409 SH3GLB2Q9NR46 395 aa17.41■□□□□ 0.38
TPM3-219ENST00000509409 NRBP2Q9NSY0 501 aa17.41■□□□□ 0.38
TPM3-219ENST00000509409 ST3GAL5Q9UNP4 418 aa17.41■□□□□ 0.38
TPM3-219ENST00000509409 CEP131Q9UPN4 1083 aa17.41■□□□□ 0.38
TPM3-219ENST00000509409 NCOR1O75376 2440 aa17.41■□□□□ 0.38
TPM3-219ENST00000509409 GRXCR2A6NFK2 248 aa17.4■□□□□ 0.38
TPM3-219ENST00000509409 WDR64B1ANS9 1081 aa17.4■□□□□ 0.38
TPM3-219ENST00000509409 ZBTB42B2RXF5 422 aa17.4■□□□□ 0.38
TPM3-219ENST00000509409 VTNP04004 478 aa17.4■□□□□ 0.38
TPM3-219ENST00000509409 LINC00271P0C7V0 271 aa17.4■□□□□ 0.38
TPM3-219ENST00000509409 IL9P15248 144 aa17.4■□□□□ 0.38
TPM3-219ENST00000509409 TMOD1P28289 359 aa17.4■□□□□ 0.38
TPM3-219ENST00000509409 SARSP49591 514 aaKnown RBP17.4■□□□□ 0.38
TPM3-219ENST00000509409 USP11P51784 963 aa17.4■□□□□ 0.38
TPM3-219ENST00000509409 CRYBB1P53674 252 aaPredicted RBP17.4■□□□□ 0.38
TPM3-219ENST00000509409 EVCP57679 992 aa17.4■□□□□ 0.38
TPM3-219ENST00000509409 STK3Q13188 491 aa17.4■□□□□ 0.38
TPM3-219ENST00000509409 TOB2Q14106 344 aaPredicted RBP17.4■□□□□ 0.38
TPM3-219ENST00000509409 CPLX2Q6PUV4 134 aaKnown RBP17.4■□□□□ 0.38
TPM3-219ENST00000509409 NEK9Q8TD19 979 aa17.4■□□□□ 0.38
TPM3-219ENST00000509409 FAM167AQ96KS9 214 aa17.4■□□□□ 0.38
TPM3-219ENST00000509409 OSMRQ99650 979 aa17.4■□□□□ 0.38
TPM3-219ENST00000509409 DISC1Q9NRI5 854 aa17.4■□□□□ 0.38
TPM3-219ENST00000509409 RAPGEFL1Q9UHV5 662 aa17.4■□□□□ 0.38
TPM3-219ENST00000509409 PLAGL2Q9UPG8 496 aa17.4■□□□□ 0.38
TPM3-219ENST00000509409 AKT3Q9Y243 479 aa17.4■□□□□ 0.38
TPM3-219ENST00000509409 FAM50BQ9Y247 325 aa17.4■□□□□ 0.38
TPM3-219ENST00000509409 MSH4O15457 936 aa17.39■□□□□ 0.37
TPM3-219ENST00000509409 MAGEB2O15479 319 aa17.39■□□□□ 0.37
TPM3-219ENST00000509409 EPB41L2O43491 1005 aaKnown RBP17.39■□□□□ 0.37
TPM3-219ENST00000509409 CHMP2AO43633 222 aa17.39■□□□□ 0.37
TPM3-219ENST00000509409 GAS7O60861 476 aa17.39■□□□□ 0.37
TPM3-219ENST00000509409 C22orf31O95567 290 aa17.39■□□□□ 0.37
TPM3-219ENST00000509409 GATMP50440 423 aa17.39■□□□□ 0.37
TPM3-219ENST00000509409 NAALADL2Q58DX5 795 aa17.39■□□□□ 0.37
TPM3-219ENST00000509409 EFCAB12Q6NXP0 572 aa17.39■□□□□ 0.37
TPM3-219ENST00000509409 FAM178BQ8IXR5 827 aa17.39■□□□□ 0.37
TPM3-219ENST00000509409 GJD3Q8N144 294 aa17.39■□□□□ 0.37
TPM3-219ENST00000509409 CRIPAKQ8N1N5 446 aa17.39■□□□□ 0.37
TPM3-219ENST00000509409 TBCKQ8TEA7 893 aa17.39■□□□□ 0.37
TPM3-219ENST00000509409 ZNF274Q96GC6 653 aaPredicted RBP17.39■□□□□ 0.37
TPM3-219ENST00000509409 TEKT3Q9BXF9 490 aa17.39■□□□□ 0.37
TPM3-219ENST00000509409 C22orf23Q9BZE7 217 aa17.39■□□□□ 0.37
TPM3-219ENST00000509409 C1orf112Q9NSG2 853 aa17.39■□□□□ 0.37
TPM3-219ENST00000509409 TBKBP1A7MCY6 615 aa17.38■□□□□ 0.37
TPM3-219ENST00000509409 MGEA5O60502 916 aa17.38■□□□□ 0.37
TPM3-219ENST00000509409 NEFLP07196 543 aa17.38■□□□□ 0.37
TPM3-219ENST00000509409 CLCN3P51790 818 aa17.38■□□□□ 0.37
TPM3-219ENST00000509409 LRCH2Q5VUJ6 765 aa17.38■□□□□ 0.37
TPM3-219ENST00000509409 FAM43BQ6ZT52 329 aaPredicted RBP17.38■□□□□ 0.37
TPM3-219ENST00000509409 SLC24A5Q71RS6 500 aa17.38■□□□□ 0.37
TPM3-219ENST00000509409 KLHL23Q8NBE8 558 aa17.38■□□□□ 0.37
TPM3-219ENST00000509409 TMEM40Q8WWA1 233 aa17.38■□□□□ 0.37
TPM3-219ENST00000509409 P2RX5Q93086 422 aa17.38■□□□□ 0.37
TPM3-219ENST00000509409 PPP2R3CQ969Q6 453 aa17.38■□□□□ 0.37
TPM3-219ENST00000509409 LENG9Q96B70 501 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms