RNA–Protein interactions for RNA: ENST00000507257.5

NUP54-205, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-205ENST00000507257 ZNF268Q14587 947 aaPredicted RBP19.31■□□□□ 0.68
NUP54-205ENST00000507257 ECM1Q16610 540 aa19.31■□□□□ 0.68
NUP54-205ENST00000507257 HIBCHQ6NVY1 386 aaPredicted RBP19.31■□□□□ 0.68
NUP54-205ENST00000507257 NEK9Q8TD19 979 aa19.31■□□□□ 0.68
NUP54-205ENST00000507257 PIGSQ96S52 555 aa19.31■□□□□ 0.68
NUP54-205ENST00000507257 ERP44Q9BS26 406 aa19.31■□□□□ 0.68
NUP54-205ENST00000507257 NSRP1Q9H0G5 558 aaKnown RBP19.31■□□□□ 0.68
NUP54-205ENST00000507257 CARD9Q9H257 536 aa19.31■□□□□ 0.68
NUP54-205ENST00000507257 EMILIN3Q9NT22 766 aa19.31■□□□□ 0.68
NUP54-205ENST00000507257 TMEM260Q9NX78 707 aa19.31■□□□□ 0.68
NUP54-205ENST00000507257 WNK3Q9BYP7 1800 aa19.31■□□□□ 0.68
NUP54-205ENST00000507257 GTPBP10A4D1E9 387 aaKnown RBP19.3■□□□□ 0.68
NUP54-205ENST00000507257 OPLAHO14841 1288 aa19.3■□□□□ 0.68
NUP54-205ENST00000507257 BAG3O95817 575 aa19.3■□□□□ 0.68
NUP54-205ENST00000507257 CHN1P15882 459 aa19.3■□□□□ 0.68
NUP54-205ENST00000507257 GSTO1P78417 241 aa19.3■□□□□ 0.68
NUP54-205ENST00000507257 PPP1R7Q15435 360 aa19.3■□□□□ 0.68
NUP54-205ENST00000507257 TNFAIP8L3Q5GJ75 292 aa19.3■□□□□ 0.68
NUP54-205ENST00000507257 NAP1L4Q99733 375 aaKnown RBP19.3■□□□□ 0.68
NUP54-205ENST00000507257 STMN4Q9H169 189 aaPredicted RBP19.3■□□□□ 0.68
NUP54-205ENST00000507257 KCNMB3Q9NPA1 279 aa19.3■□□□□ 0.68
NUP54-205ENST00000507257 PNMA2Q9UL42 364 aa19.3■□□□□ 0.68
NUP54-205ENST00000507257 FERP16591 822 aa19.29■□□□□ 0.68
NUP54-205ENST00000507257 PON1P27169 355 aa19.29■□□□□ 0.68
NUP54-205ENST00000507257 ADCY2Q08462 1091 aa19.29■□□□□ 0.68
NUP54-205ENST00000507257 EXOC3L4Q17RC7 722 aa19.29■□□□□ 0.68
NUP54-205ENST00000507257 C6orf118Q5T5N4 469 aa19.29■□□□□ 0.68
NUP54-205ENST00000507257 C16orf86Q6ZW13 317 aa19.29■□□□□ 0.68
NUP54-205ENST00000507257 MOV10L1Q9BXT6 1211 aaKnown RBP19.29■□□□□ 0.68
NUP54-205ENST00000507257 GOLPH3Q9H4A6 298 aa19.29■□□□□ 0.68
NUP54-205ENST00000507257 SAMD15Q9P1V8 674 aa19.29■□□□□ 0.68
NUP54-205ENST00000507257 ARMCX3Q9UH62 379 aaPredicted RBP19.29■□□□□ 0.68
NUP54-205ENST00000507257 CDK5RAP2Q96SN8 1893 aa19.29■□□□□ 0.68
NUP54-205ENST00000507257 KLRK1P26718 216 aa19.29■□□□□ 0.68
NUP54-205ENST00000507257 PMS2P54278 862 aa19.29■□□□□ 0.68
NUP54-205ENST00000507257 KLRC3Q07444 240 aa19.29■□□□□ 0.68
NUP54-205ENST00000507257 E2F5Q15329 346 aa19.29■□□□□ 0.68
NUP54-205ENST00000507257 ERFEQ4G0M1 354 aa19.29■□□□□ 0.68
NUP54-205ENST00000507257 C3orf67Q6ZVT6 689 aa19.29■□□□□ 0.68
NUP54-205ENST00000507257 TRPM8Q7Z2W7 1104 aa19.29■□□□□ 0.68
NUP54-205ENST00000507257 DAAM2Q86T65 1068 aa19.29■□□□□ 0.68
NUP54-205ENST00000507257 RBM46Q8TBY0 533 aaKnown RBP19.29■□□□□ 0.68
NUP54-205ENST00000507257 MDM1Q8TC05 714 aa19.29■□□□□ 0.68
NUP54-205ENST00000507257 CELF1Q92879 486 aaKnown RBP19.29■□□□□ 0.68
NUP54-205ENST00000507257 FGFBP2Q9BYJ0 223 aa19.29■□□□□ 0.68
NUP54-205ENST00000507257 METTL14Q9HCE5 456 aaKnown RBP19.29■□□□□ 0.68
NUP54-205ENST00000507257 ATP8A1Q9Y2Q0 1164 aa19.29■□□□□ 0.68
NUP54-205ENST00000507257 KAT6BQ8WYB5 2073 aa19.29■□□□□ 0.68
NUP54-205ENST00000507257 IRS2Q9Y4H2 1338 aa19.29■□□□□ 0.68
NUP54-205ENST00000507257 GOLGA6L10A0A0M3HER8 536 aa19.28■□□□□ 0.68
NUP54-205ENST00000507257 BACH1O14867 736 aa19.28■□□□□ 0.68
NUP54-205ENST00000507257 SLC9A1P19634 815 aa19.28■□□□□ 0.68
NUP54-205ENST00000507257 GBP2P32456 591 aaPredicted RBP19.28■□□□□ 0.68
NUP54-205ENST00000507257 ZNF131P52739 623 aa19.28■□□□□ 0.68
NUP54-205ENST00000507257 SATB1Q01826 763 aa19.28■□□□□ 0.68
NUP54-205ENST00000507257 PPATQ06203 517 aa19.28■□□□□ 0.68
NUP54-205ENST00000507257 EPHA7Q15375 998 aa19.28■□□□□ 0.68
NUP54-205ENST00000507257 DENND2CQ68D51 928 aa19.28■□□□□ 0.68
NUP54-205ENST00000507257 USP17L2Q6R6M4 530 aa19.28■□□□□ 0.68
NUP54-205ENST00000507257 SH3RF3Q8TEJ3 882 aaPredicted RBP19.28■□□□□ 0.68
NUP54-205ENST00000507257 HAS1Q92839 578 aa19.28■□□□□ 0.68
NUP54-205ENST00000507257 CELF4Q9BZC1 486 aaKnown RBP19.28■□□□□ 0.68
NUP54-205ENST00000507257 TRIM6Q9C030 488 aaPredicted RBP19.28■□□□□ 0.68
NUP54-205ENST00000507257 CPVLQ9H3G5 476 aa19.28■□□□□ 0.68
NUP54-205ENST00000507257 DAAM1Q9Y4D1 1078 aa19.28■□□□□ 0.68
NUP54-205ENST00000507257 DDX3XO00571 662 aaKnown RBP eCLIP19.27■□□□□ 0.683e-11■■□□□ 12
NUP54-205ENST00000507257 PPP1R12AO14974 1030 aaPredicted RBP19.27■□□□□ 0.68
NUP54-205ENST00000507257 DDX3YO15523 660 aaKnown RBP19.27■□□□□ 0.68
NUP54-205ENST00000507257 PLA2G4BP0C869 781 aa19.27■□□□□ 0.68
NUP54-205ENST00000507257 HSPA6P17066 643 aa19.27■□□□□ 0.68
NUP54-205ENST00000507257 NR2F2P24468 414 aa19.27■□□□□ 0.68
NUP54-205ENST00000507257 CLK2P49760 499 aaKnown RBP19.27■□□□□ 0.68
NUP54-205ENST00000507257 DR1Q01658 176 aa19.27■□□□□ 0.68
NUP54-205ENST00000507257 ENOX2Q16206 610 aaKnown RBP19.27■□□□□ 0.68
NUP54-205ENST00000507257 SLC30A5Q8TAD4 765 aa19.27■□□□□ 0.68
NUP54-205ENST00000507257 WDR66Q8TBY9 1149 aa19.27■□□□□ 0.68
NUP54-205ENST00000507257 RFFLQ8WZ73 363 aa19.27■□□□□ 0.68
NUP54-205ENST00000507257 EYA3Q99504 573 aa19.27■□□□□ 0.68
NUP54-205ENST00000507257 DPH5Q9H2P9 285 aa19.27■□□□□ 0.68
NUP54-205ENST00000507257 TRPC6Q9Y210 931 aa19.27■□□□□ 0.68
NUP54-205ENST00000507257 SLC16A3O15427 465 aaKnown RBP19.27■□□□□ 0.67
NUP54-205ENST00000507257 FGGP02679 453 aa19.27■□□□□ 0.67
NUP54-205ENST00000507257 TMEM253P0C7T8 217 aa19.27■□□□□ 0.67
NUP54-205ENST00000507257 ACTN1P12814 892 aa19.27■□□□□ 0.67
NUP54-205ENST00000507257 CYP11B2P19099 503 aa19.27■□□□□ 0.67
NUP54-205ENST00000507257 HERC4Q5GLZ8 1057 aaPredicted RBP19.27■□□□□ 0.67
NUP54-205ENST00000507257 NELFCDQ8IXH7 590 aa19.27■□□□□ 0.67
NUP54-205ENST00000507257 GBP7Q8N8V2 638 aaPredicted RBP19.27■□□□□ 0.67
NUP54-205ENST00000507257 SLC44A5Q8NCS7 719 aa19.27■□□□□ 0.67
NUP54-205ENST00000507257 SIX2Q9NPC8 291 aa19.27■□□□□ 0.67
NUP54-205ENST00000507257 INTS9Q9NV88 658 aaKnown RBP19.27■□□□□ 0.67
NUP54-205ENST00000507257 PARP2Q9UGN5 583 aa19.27■□□□□ 0.67
NUP54-205ENST00000507257 DDX25Q9UHL0 483 aaKnown RBP19.27■□□□□ 0.67
NUP54-205ENST00000507257 BAIAP2L1Q9UHR4 511 aa19.27■□□□□ 0.67
NUP54-205ENST00000507257 RASAL2Q9UJF2 1139 aa19.27■□□□□ 0.67
NUP54-205ENST00000507257 C15orf41Q9Y2V0 281 aa19.27■□□□□ 0.67
NUP54-205ENST00000507257 PDXKO00764 312 aa19.26■□□□□ 0.67
NUP54-205ENST00000507257 KIF3CO14782 793 aa19.26■□□□□ 0.67
NUP54-205ENST00000507257 BUB1BO60566 1050 aaPredicted RBP19.26■□□□□ 0.67
NUP54-205ENST00000507257 OAS1P00973 400 aaKnown RBP19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms