RNA–Protein interactions for RNA: ENST00000506426.1

TRAPPC11-205, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-205ENST00000506426 RBM12BQ8IXT5 1001 aaKnown RBP4.14□□□□□ -1.75
TRAPPC11-205ENST00000506426 SMC5Q8IY18 1101 aa4.14□□□□□ -1.75
TRAPPC11-205ENST00000506426 ABI1Q8IZP0 508 aa4.14□□□□□ -1.75
TRAPPC11-205ENST00000506426 SAMD3Q8N6K7 520 aa4.14□□□□□ -1.75
TRAPPC11-205ENST00000506426 NETO2Q8NC67 525 aa4.14□□□□□ -1.75
TRAPPC11-205ENST00000506426 FBXO41Q8TF61 875 aa4.14□□□□□ -1.75
TRAPPC11-205ENST00000506426 TGFBRAP1Q8WUH2 860 aa4.14□□□□□ -1.75
TRAPPC11-205ENST00000506426 JADE3Q92613 823 aa4.14□□□□□ -1.75
TRAPPC11-205ENST00000506426 E2F7Q96AV8 911 aa4.14□□□□□ -1.75
TRAPPC11-205ENST00000506426 ZNF496Q96IT1 587 aaPredicted RBP4.14□□□□□ -1.75
TRAPPC11-205ENST00000506426 TEKT5Q96M29 485 aa4.14□□□□□ -1.75
TRAPPC11-205ENST00000506426 LRGUKQ96M69 825 aa4.14□□□□□ -1.75
TRAPPC11-205ENST00000506426 PLCD4Q9BRC7 762 aa4.14□□□□□ -1.75
TRAPPC11-205ENST00000506426 PDGFDQ9GZP0 370 aaPredicted RBP4.14□□□□□ -1.75
TRAPPC11-205ENST00000506426 ZNF700Q9H0M5 742 aa4.14□□□□□ -1.75
TRAPPC11-205ENST00000506426 DNAJC28Q9NX36 388 aa4.14□□□□□ -1.75
TRAPPC11-205ENST00000506426 NUDT5Q9UKK9 219 aa4.14□□□□□ -1.75
TRAPPC11-205ENST00000506426 PCDHB4Q9Y5E5 795 aa4.14□□□□□ -1.75
TRAPPC11-205ENST00000506426 COMMD10Q9Y6G5 202 aa4.14□□□□□ -1.75
TRAPPC11-205ENST00000506426 ZNF608Q9ULD9 1512 aaPredicted RBP4.13□□□□□ -1.75
TRAPPC11-205ENST00000506426 C4BPAP04003 597 aaKnown RBP4.13□□□□□ -1.75
TRAPPC11-205ENST00000506426 GLI4P10075 376 aa4.13□□□□□ -1.75
TRAPPC11-205ENST00000506426 MTHFD2P13995 350 aa4.13□□□□□ -1.75
TRAPPC11-205ENST00000506426 TRIM27P14373 513 aa4.13□□□□□ -1.75
TRAPPC11-205ENST00000506426 ARL4AP40617 200 aa4.13□□□□□ -1.75
TRAPPC11-205ENST00000506426 HERVK_113P62684 666 aa4.13□□□□□ -1.75
TRAPPC11-205ENST00000506426 GBX1Q14549 363 aa4.13□□□□□ -1.75
TRAPPC11-205ENST00000506426 NR0B2Q15466 257 aa4.13□□□□□ -1.75
TRAPPC11-205ENST00000506426 RRP12Q5JTH9 1297 aaKnown RBP4.13□□□□□ -1.75
TRAPPC11-205ENST00000506426 CATSPEREQ5SY80 951 aa4.13□□□□□ -1.75
TRAPPC11-205ENST00000506426 SYCP2LQ5T4T6 812 aa4.13□□□□□ -1.75
TRAPPC11-205ENST00000506426 MILR1Q7Z6M3 343 aa4.13□□□□□ -1.75
TRAPPC11-205ENST00000506426 CXorf67Q86X51 503 aaPredicted RBP4.13□□□□□ -1.75
TRAPPC11-205ENST00000506426 MIER2Q8N344 545 aa4.13□□□□□ -1.75
TRAPPC11-205ENST00000506426 C7orf31Q8N865 590 aa4.13□□□□□ -1.75
TRAPPC11-205ENST00000506426 CLEC4DQ8WXI8 215 aa4.13□□□□□ -1.75
TRAPPC11-205ENST00000506426 GBP4Q96PP9 640 aa4.13□□□□□ -1.75
TRAPPC11-205ENST00000506426 MPHOSPH6Q99547 160 aaKnown RBP4.13□□□□□ -1.75
TRAPPC11-205ENST00000506426 ANO3Q9BYT9 981 aa4.13□□□□□ -1.75
TRAPPC11-205ENST00000506426 CSRNP2Q9H175 543 aa4.13□□□□□ -1.75
TRAPPC11-205ENST00000506426 WNT8AQ9H1J5 351 aa4.13□□□□□ -1.75
TRAPPC11-205ENST00000506426 RC3H2Q9HBD1 1191 aaKnown RBP4.13□□□□□ -1.75
TRAPPC11-205ENST00000506426 NMRK2Q9NPI5 230 aa4.13□□□□□ -1.75
TRAPPC11-205ENST00000506426 ANLNQ9NQW6 1124 aa4.13□□□□□ -1.75
TRAPPC11-205ENST00000506426 PALD1Q9ULE6 856 aa4.13□□□□□ -1.75
TRAPPC11-205ENST00000506426 TELO2Q9Y4R8 837 aa4.13□□□□□ -1.75
TRAPPC11-205ENST00000506426 GPR45Q9Y5Y3 372 aa4.13□□□□□ -1.75
TRAPPC11-205ENST00000506426 TCRBV5S2A0A599 114 aa4.12□□□□□ -1.75
TRAPPC11-205ENST00000506426 NOTOA8MTQ0 251 aa4.12□□□□□ -1.75
TRAPPC11-205ENST00000506426 SGSM2O43147 1006 aa4.12□□□□□ -1.75
TRAPPC11-205ENST00000506426 OFD1O75665 1012 aa4.12□□□□□ -1.75
TRAPPC11-205ENST00000506426 WNT11O96014 354 aa4.12□□□□□ -1.75
TRAPPC11-205ENST00000506426 C8AP07357 584 aa4.12□□□□□ -1.75
TRAPPC11-205ENST00000506426 NBPF7P0C2Y1 421 aaPredicted RBP4.12□□□□□ -1.75
TRAPPC11-205ENST00000506426 TMEM253P0C7T8 217 aa4.12□□□□□ -1.75
TRAPPC11-205ENST00000506426 PNLIPP16233 465 aa4.12□□□□□ -1.75
TRAPPC11-205ENST00000506426 AGXTP21549 392 aa4.12□□□□□ -1.75
TRAPPC11-205ENST00000506426 MANFP55145 182 aaKnown RBP4.12□□□□□ -1.75
TRAPPC11-205ENST00000506426 GRIN1Q05586 938 aa4.12□□□□□ -1.75
TRAPPC11-205ENST00000506426 MOGSQ13724 837 aa4.12□□□□□ -1.75
TRAPPC11-205ENST00000506426 KIR3DS1Q14943 382 aa4.12□□□□□ -1.75
TRAPPC11-205ENST00000506426 SNX17Q15036 470 aa4.12□□□□□ -1.75
TRAPPC11-205ENST00000506426 CT83Q5H943 113 aa4.12□□□□□ -1.75
TRAPPC11-205ENST00000506426 TOR2AQ5JU69 321 aa4.12□□□□□ -1.75
TRAPPC11-205ENST00000506426 IFIT1BQ5T764 474 aaKnown RBP4.12□□□□□ -1.75
TRAPPC11-205ENST00000506426 SPRED2Q7Z698 418 aa4.12□□□□□ -1.75
TRAPPC11-205ENST00000506426 LILRA2Q8N149 483 aa4.12□□□□□ -1.75
TRAPPC11-205ENST00000506426 HIPK4Q8NE63 616 aa4.12□□□□□ -1.75
TRAPPC11-205ENST00000506426 SVIPQ8NHG7 77 aa4.12□□□□□ -1.75
TRAPPC11-205ENST00000506426 TTLL11Q8NHH1 800 aa4.12□□□□□ -1.75
TRAPPC11-205ENST00000506426 ASB15Q8WXK1 588 aa4.12□□□□□ -1.75
TRAPPC11-205ENST00000506426 ERCC4Q92889 916 aaPredicted RBP4.12□□□□□ -1.75
TRAPPC11-205ENST00000506426 TIFAQ96CG3 184 aa4.12□□□□□ -1.75
TRAPPC11-205ENST00000506426 EAF2Q96CJ1 260 aaPredicted RBP4.12□□□□□ -1.75
TRAPPC11-205ENST00000506426 PEX11GQ96HA9 241 aa4.12□□□□□ -1.75
TRAPPC11-205ENST00000506426 RAX2Q96IS3 184 aa4.12□□□□□ -1.75
TRAPPC11-205ENST00000506426 MAML3Q96JK9 1138 aa4.12□□□□□ -1.75
TRAPPC11-205ENST00000506426 TUBGCP5Q96RT8 1024 aa4.12□□□□□ -1.75
TRAPPC11-205ENST00000506426 SARGQ9BW04 601 aa4.12□□□□□ -1.75
TRAPPC11-205ENST00000506426 MAN1C1Q9NR34 630 aa4.12□□□□□ -1.75
TRAPPC11-205ENST00000506426 ZNF277Q9NRM2 450 aaPredicted RBP4.12□□□□□ -1.75
TRAPPC11-205ENST00000506426 SAP30BPQ9UHR5 308 aaKnown RBP4.12□□□□□ -1.75
TRAPPC11-205ENST00000506426 ASB1Q9Y576 335 aa4.12□□□□□ -1.75
TRAPPC11-205ENST00000506426 FRMPD2Q68DX3 1309 aaPredicted RBP4.12□□□□□ -1.75
TRAPPC11-205ENST00000506426 UBA6A0AVT1 1052 aaPredicted RBP4.11□□□□□ -1.75
TRAPPC11-205ENST00000506426 RASSF10A6NK89 507 aa4.11□□□□□ -1.75
TRAPPC11-205ENST00000506426 GOLGA6L22H0YM25 854 aa4.11□□□□□ -1.75
TRAPPC11-205ENST00000506426 ACOT7O00154 380 aa4.11□□□□□ -1.75
TRAPPC11-205ENST00000506426 SRGAP3O43295 1099 aa4.11□□□□□ -1.75
TRAPPC11-205ENST00000506426 AP1G1O43747 822 aa4.11□□□□□ -1.75
TRAPPC11-205ENST00000506426 PSPNO60542 156 aa4.11□□□□□ -1.75
TRAPPC11-205ENST00000506426 CTNND1O60716 968 aaKnown RBP4.11□□□□□ -1.75
TRAPPC11-205ENST00000506426 ZRANB2O95218 330 aaKnown RBP eCLIP4.11□□□□□ -1.75
TRAPPC11-205ENST00000506426 ZBTB7AO95365 584 aa4.11□□□□□ -1.75
TRAPPC11-205ENST00000506426 HPXP02790 462 aa4.11□□□□□ -1.75
TRAPPC11-205ENST00000506426 PRNPP04156 253 aa4.11□□□□□ -1.75
TRAPPC11-205ENST00000506426 CYBBP04839 570 aa4.11□□□□□ -1.75
TRAPPC11-205ENST00000506426 ASGR2P07307 311 aa4.11□□□□□ -1.75
TRAPPC11-205ENST00000506426 MMEP08473 750 aa4.11□□□□□ -1.75
TRAPPC11-205ENST00000506426 DBHP09172 617 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms