RNA–Protein interactions for RNA: ENST00000495784.1

CLCNKA-207, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 5

Gene CLCNKA, Length 727 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-207ENST00000495784 PTCRAQ6ISU1 281 aaPredicted RBP20.87■□□□□ 0.93
CLCNKA-207ENST00000495784 TRMT1LQ7Z2T5 733 aaKnown RBP20.87■□□□□ 0.93
CLCNKA-207ENST00000495784 KIAA0319LQ8IZA0 1049 aa20.87■□□□□ 0.93
CLCNKA-207ENST00000495784 BBXQ8WY36 941 aaPredicted RBP20.87■□□□□ 0.93
CLCNKA-207ENST00000495784 PABPC5Q96DU9 382 aaKnown RBP20.87■□□□□ 0.93
CLCNKA-207ENST00000495784 PLVAPQ9BX97 442 aa20.87■□□□□ 0.93
CLCNKA-207ENST00000495784 NCOA5Q9HCD5 579 aaKnown RBP20.87■□□□□ 0.93
CLCNKA-207ENST00000495784 SAMM50Q9Y512 469 aa20.87■□□□□ 0.93
CLCNKA-207ENST00000495784 PCDHA10Q9Y5I2 948 aa20.87■□□□□ 0.93
CLCNKA-207ENST00000495784 MAFBQ9Y5Q3 323 aaPredicted RBP20.87■□□□□ 0.93
CLCNKA-207ENST00000495784 RPS6KA5O75582 802 aa20.86■□□□□ 0.93
CLCNKA-207ENST00000495784 ATP4AP20648 1035 aa20.86■□□□□ 0.93
CLCNKA-207ENST00000495784 CIITAP33076 1130 aa20.86■□□□□ 0.93
CLCNKA-207ENST00000495784 PAN2Q504Q3 1202 aaKnown RBP20.86■□□□□ 0.93
CLCNKA-207ENST00000495784 ODR4Q5SWX8 454 aa20.86■□□□□ 0.93
CLCNKA-207ENST00000495784 RUFY3Q7L099 469 aa20.86■□□□□ 0.93
CLCNKA-207ENST00000495784 TRIM22Q8IYM9 498 aa20.86■□□□□ 0.93
CLCNKA-207ENST00000495784 NEK9Q8TD19 979 aa20.86■□□□□ 0.93
CLCNKA-207ENST00000495784 TMX1Q9H3N1 280 aa20.86■□□□□ 0.93
CLCNKA-207ENST00000495784 GABBR1Q9UBS5 961 aa20.86■□□□□ 0.93
CLCNKA-207ENST00000495784 CEP131Q9UPN4 1083 aa20.86■□□□□ 0.93
CLCNKA-207ENST00000495784 MRPL42Q9Y6G3 142 aaKnown RBP20.86■□□□□ 0.93
CLCNKA-207ENST00000495784 ZBTB42B2RXF5 422 aa20.85■□□□□ 0.93
CLCNKA-207ENST00000495784 NCK2O43639 380 aa20.85■□□□□ 0.93
CLCNKA-207ENST00000495784 CSPG5O95196 566 aa20.85■□□□□ 0.93
CLCNKA-207ENST00000495784 C22orf31O95567 290 aa20.85■□□□□ 0.93
CLCNKA-207ENST00000495784 IL9P15248 144 aa20.85■□□□□ 0.93
CLCNKA-207ENST00000495784 EVCP57679 992 aa20.85■□□□□ 0.93
CLCNKA-207ENST00000495784 NLRP5P59047 1200 aa20.85■□□□□ 0.93
CLCNKA-207ENST00000495784 FAM43BQ6ZT52 329 aaPredicted RBP20.85■□□□□ 0.93
CLCNKA-207ENST00000495784 CRIPAKQ8N1N5 446 aa20.85■□□□□ 0.93
CLCNKA-207ENST00000495784 METTL13Q8N6R0 699 aa20.85■□□□□ 0.93
CLCNKA-207ENST00000495784 EPHX3Q9H6B9 360 aa20.85■□□□□ 0.93
CLCNKA-207ENST00000495784 ERVK-5Q9HDB9 667 aa20.85■□□□□ 0.93
CLCNKA-207ENST00000495784 CLDND1Q9NY35 253 aa20.85■□□□□ 0.93
CLCNKA-207ENST00000495784 NOC2LQ9Y3T9 749 aaKnown RBP20.85■□□□□ 0.93
CLCNKA-207ENST00000495784 CYP46A1Q9Y6A2 500 aa20.85■□□□□ 0.93
CLCNKA-207ENST00000495784 DENND3A2RUS2 1198 aa20.84■□□□□ 0.93
CLCNKA-207ENST00000495784 GRXCR2A6NFK2 248 aa20.84■□□□□ 0.93
CLCNKA-207ENST00000495784 WDR64B1ANS9 1081 aa20.84■□□□□ 0.93
CLCNKA-207ENST00000495784 GPR182O15218 404 aa20.84■□□□□ 0.93
CLCNKA-207ENST00000495784 EPB41L2O43491 1005 aaKnown RBP20.84■□□□□ 0.93
CLCNKA-207ENST00000495784 SARSP49591 514 aaKnown RBP20.84■□□□□ 0.93
CLCNKA-207ENST00000495784 COL19A1Q14993 1142 aa20.84■□□□□ 0.93
CLCNKA-207ENST00000495784 FAM178BQ8IXR5 827 aa20.84■□□□□ 0.93
CLCNKA-207ENST00000495784 LENG9Q96B70 501 aa20.84■□□□□ 0.93
CLCNKA-207ENST00000495784 FAM167AQ96KS9 214 aa20.84■□□□□ 0.93
CLCNKA-207ENST00000495784 PPP1R16BQ96T49 567 aa20.84■□□□□ 0.93
CLCNKA-207ENST00000495784 CDHR5Q9HBB8 845 aa20.84■□□□□ 0.93
CLCNKA-207ENST00000495784 ZSWIM6Q9HCJ5 1215 aa20.84■□□□□ 0.93
CLCNKA-207ENST00000495784 ALG13Q9NP73 1137 aaKnown RBP20.84■□□□□ 0.93
CLCNKA-207ENST00000495784 SH3GLB2Q9NR46 395 aa20.84■□□□□ 0.93
CLCNKA-207ENST00000495784 RNF216Q9NWF9 866 aaPredicted RBP20.84■□□□□ 0.93
CLCNKA-207ENST00000495784 FAM50BQ9Y247 325 aa20.84■□□□□ 0.93
CLCNKA-207ENST00000495784 PCDHB7Q9Y5E2 793 aa20.84■□□□□ 0.93
CLCNKA-207ENST00000495784 CPLX1O14810 134 aa20.83■□□□□ 0.93
CLCNKA-207ENST00000495784 MMP1P03956 469 aa20.83■□□□□ 0.93
CLCNKA-207ENST00000495784 SSTR3P32745 418 aaPredicted RBP20.83■□□□□ 0.93
CLCNKA-207ENST00000495784 USP11P51784 963 aa20.83■□□□□ 0.93
CLCNKA-207ENST00000495784 CRYBB1P53674 252 aaPredicted RBP20.83■□□□□ 0.93
CLCNKA-207ENST00000495784 SSRP1Q08945 709 aaKnown RBP20.83■□□□□ 0.93
CLCNKA-207ENST00000495784 KIZQ2M2Z5 673 aa20.83■□□□□ 0.93
CLCNKA-207ENST00000495784 GJD3Q8N144 294 aa20.83■□□□□ 0.93
CLCNKA-207ENST00000495784 TMEM40Q8WWA1 233 aa20.83■□□□□ 0.93
CLCNKA-207ENST00000495784 P2RX5Q93086 422 aa20.83■□□□□ 0.93
CLCNKA-207ENST00000495784 OSMRQ99650 979 aa20.83■□□□□ 0.93
CLCNKA-207ENST00000495784 ADAM2Q99965 735 aa20.83■□□□□ 0.93
CLCNKA-207ENST00000495784 CD320Q9NPF0 282 aa20.83■□□□□ 0.93
CLCNKA-207ENST00000495784 C1orf112Q9NSG2 853 aa20.83■□□□□ 0.93
CLCNKA-207ENST00000495784 ST3GAL5Q9UNP4 418 aa20.83■□□□□ 0.93
CLCNKA-207ENST00000495784 PLAGL2Q9UPG8 496 aa20.83■□□□□ 0.93
CLCNKA-207ENST00000495784 MAGEB2O15479 319 aa20.82■□□□□ 0.92
CLCNKA-207ENST00000495784 MGEA5O60502 916 aa20.82■□□□□ 0.92
CLCNKA-207ENST00000495784 GAS7O60861 476 aa20.82■□□□□ 0.92
CLCNKA-207ENST00000495784 VTNP04004 478 aa20.82■□□□□ 0.92
CLCNKA-207ENST00000495784 GATMP50440 423 aa20.82■□□□□ 0.92
CLCNKA-207ENST00000495784 TOB2Q14106 344 aaPredicted RBP20.82■□□□□ 0.92
CLCNKA-207ENST00000495784 NAALADL2Q58DX5 795 aa20.82■□□□□ 0.92
CLCNKA-207ENST00000495784 C22orf23Q9BZE7 217 aa20.82■□□□□ 0.92
CLCNKA-207ENST00000495784 DISC1Q9NRI5 854 aa20.82■□□□□ 0.92
CLCNKA-207ENST00000495784 RAPGEFL1Q9UHV5 662 aa20.82■□□□□ 0.92
CLCNKA-207ENST00000495784 MSH4O15457 936 aa20.81■□□□□ 0.92
CLCNKA-207ENST00000495784 CHMP2AO43633 222 aa20.81■□□□□ 0.92
CLCNKA-207ENST00000495784 HYAL1Q12794 435 aa20.81■□□□□ 0.92
CLCNKA-207ENST00000495784 LRCH2Q5VUJ6 765 aa20.81■□□□□ 0.92
CLCNKA-207ENST00000495784 CPLX2Q6PUV4 134 aaKnown RBP20.81■□□□□ 0.92
CLCNKA-207ENST00000495784 SLC24A5Q71RS6 500 aa20.81■□□□□ 0.92
CLCNKA-207ENST00000495784 KHSRPQ92945 711 aaKnown RBP eCLIP20.81■□□□□ 0.92
CLCNKA-207ENST00000495784 PPP2R3CQ969Q6 453 aa20.81■□□□□ 0.92
CLCNKA-207ENST00000495784 MAP7D2Q96T17 732 aa20.81■□□□□ 0.92
CLCNKA-207ENST00000495784 RIT2Q99578 217 aa20.81■□□□□ 0.92
CLCNKA-207ENST00000495784 RGS18Q9NS28 235 aa20.81■□□□□ 0.92
CLCNKA-207ENST00000495784 NRBP2Q9NSY0 501 aa20.81■□□□□ 0.92
CLCNKA-207ENST00000495784 PCDHA4Q9UN74 947 aa20.81■□□□□ 0.92
CLCNKA-207ENST00000495784 MYO7AQ13402 2215 aa20.8■□□□□ 0.92
CLCNKA-207ENST00000495784 DEXIO95424 95 aa20.8■□□□□ 0.92
CLCNKA-207ENST00000495784 OATP04181 439 aa20.8■□□□□ 0.92
CLCNKA-207ENST00000495784 ITGB1P05556 798 aa20.8■□□□□ 0.92
CLCNKA-207ENST00000495784 TMOD1P28289 359 aa20.8■□□□□ 0.92
CLCNKA-207ENST00000495784 CLCN3P51790 818 aa20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 106 ms