RNA–Protein interactions for RNA: ENST00000489719.1

ABCF3-217, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 4

Gene ABCF3, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-217ENST00000489719 OATP04181 439 aa20.09■□□□□ 0.81
ABCF3-217ENST00000489719 TMOD1P28289 359 aa20.09■□□□□ 0.81
ABCF3-217ENST00000489719 CD52P31358 61 aa20.09■□□□□ 0.81
ABCF3-217ENST00000489719 TGS1Q96RS0 853 aaKnown RBP20.09■□□□□ 0.81
ABCF3-217ENST00000489719 FTHL17Q9BXU8 183 aa20.09■□□□□ 0.81
ABCF3-217ENST00000489719 KDM3AQ9Y4C1 1321 aa20.08■□□□□ 0.81
ABCF3-217ENST00000489719 SLC37A4O43826 429 aa20.08■□□□□ 0.81
ABCF3-217ENST00000489719 ZNF862O60290 1169 aa20.08■□□□□ 0.81
ABCF3-217ENST00000489719 C22orf31O95567 290 aa20.08■□□□□ 0.81
ABCF3-217ENST00000489719 FOSBP53539 338 aa20.08■□□□□ 0.81
ABCF3-217ENST00000489719 HTRA4P83105 476 aaPredicted RBP20.08■□□□□ 0.81
ABCF3-217ENST00000489719 PRKCEQ02156 737 aa20.08■□□□□ 0.81
ABCF3-217ENST00000489719 PAK2Q13177 524 aa20.08■□□□□ 0.81
ABCF3-217ENST00000489719 NR5A1Q13285 461 aa20.08■□□□□ 0.81
ABCF3-217ENST00000489719 SAFBQ15424 915 aaKnown RBP eCLIP20.08■□□□□ 0.81
ABCF3-217ENST00000489719 ODR4Q5SWX8 454 aa20.08■□□□□ 0.81
ABCF3-217ENST00000489719 EFCAB12Q6NXP0 572 aa20.08■□□□□ 0.81
ABCF3-217ENST00000489719 CCDC83Q8IWF9 413 aa20.08■□□□□ 0.81
ABCF3-217ENST00000489719 UPF2Q9HAU5 1272 aaKnown RBP20.08■□□□□ 0.81
ABCF3-217ENST00000489719 PADI3Q9ULW8 664 aa20.08■□□□□ 0.81
ABCF3-217ENST00000489719 IGSF9BQ9UPX0 1349 aa20.07■□□□□ 0.8
ABCF3-217ENST00000489719 LINC01553A4QN01 128 aa20.07■□□□□ 0.8
ABCF3-217ENST00000489719 TBX3O15119 743 aa20.07■□□□□ 0.8
ABCF3-217ENST00000489719 MMP1P03956 469 aa20.07■□□□□ 0.8
ABCF3-217ENST00000489719 ERVK-21P61565 698 aa20.07■□□□□ 0.8
ABCF3-217ENST00000489719 NFX1Q12986 1120 aaKnown RBP20.07■□□□□ 0.8
ABCF3-217ENST00000489719 KRT40Q6A162 431 aa20.07■□□□□ 0.8
ABCF3-217ENST00000489719 FAM43BQ6ZT52 329 aaPredicted RBP20.07■□□□□ 0.8
ABCF3-217ENST00000489719 MICALL1Q8N3F8 863 aa20.07■□□□□ 0.8
ABCF3-217ENST00000489719 LLPHQ9BRT6 129 aaKnown RBP20.07■□□□□ 0.8
ABCF3-217ENST00000489719 SUGCTQ9HAC7 445 aa20.07■□□□□ 0.8
ABCF3-217ENST00000489719 SH2B1Q9NRF2 756 aaPredicted RBP20.07■□□□□ 0.8
ABCF3-217ENST00000489719 MTUS1Q9ULD2 1270 aa20.07■□□□□ 0.8
ABCF3-217ENST00000489719 EPOPA6NHQ4 379 aa20.06■□□□□ 0.8
ABCF3-217ENST00000489719 DDX11L8A8MPP1 907 aa20.06■□□□□ 0.8
ABCF3-217ENST00000489719 BTBD18B2RXH4 712 aa20.06■□□□□ 0.8
ABCF3-217ENST00000489719 RPS6KA5O75582 802 aa20.06■□□□□ 0.8
ABCF3-217ENST00000489719 POU3F3P20264 500 aaPredicted RBP20.06■□□□□ 0.8
ABCF3-217ENST00000489719 RBM25P49756 843 aaKnown RBP20.06■□□□□ 0.8
ABCF3-217ENST00000489719 CRYBB1P53674 252 aaPredicted RBP20.06■□□□□ 0.8
ABCF3-217ENST00000489719 UGCGQ16739 394 aa20.06■□□□□ 0.8
ABCF3-217ENST00000489719 XKR3Q5GH77 459 aa20.06■□□□□ 0.8
ABCF3-217ENST00000489719 EARS2Q5JPH6 523 aaKnown RBP20.06■□□□□ 0.8
ABCF3-217ENST00000489719 B3GNT9Q6UX72 402 aa20.06■□□□□ 0.8
ABCF3-217ENST00000489719 DIS3L2Q8IYB7 885 aaKnown RBP20.06■□□□□ 0.8
ABCF3-217ENST00000489719 SLFN12Q8IYM2 578 aa20.06■□□□□ 0.8
ABCF3-217ENST00000489719 ZNF710Q8N1W2 664 aa20.06■□□□□ 0.8
ABCF3-217ENST00000489719 KAT6AQ92794 2004 aa20.06■□□□□ 0.8
ABCF3-217ENST00000489719 MAP7D2Q96T17 732 aa20.06■□□□□ 0.8
ABCF3-217ENST00000489719 KIF2CQ99661 725 aa20.06■□□□□ 0.8
ABCF3-217ENST00000489719 TSPYL2Q9H2G4 693 aaPredicted RBP20.06■□□□□ 0.8
ABCF3-217ENST00000489719 CDHR5Q9HBB8 845 aa20.06■□□□□ 0.8
ABCF3-217ENST00000489719 KCNMB3Q9NPA1 279 aa20.06■□□□□ 0.8
ABCF3-217ENST00000489719 AKT3Q9Y243 479 aa20.06■□□□□ 0.8
ABCF3-217ENST00000489719 GPR182O15218 404 aa20.05■□□□□ 0.8
ABCF3-217ENST00000489719 DKC1O60832 514 aaKnown RBP eCLIP20.05■□□□□ 0.8
ABCF3-217ENST00000489719 PSMC5P62195 406 aa20.05■□□□□ 0.8
ABCF3-217ENST00000489719 TBC1D8BQ0IIM8 1120 aa20.05■□□□□ 0.8
ABCF3-217ENST00000489719 PPP2R5CQ13362 524 aa20.05■□□□□ 0.8
ABCF3-217ENST00000489719 KIZQ2M2Z5 673 aa20.05■□□□□ 0.8
ABCF3-217ENST00000489719 NIFKQ9BYG3 293 aaKnown RBP20.05■□□□□ 0.8
ABCF3-217ENST00000489719 SEPT9Q9UHD8 586 aaPredicted RBP20.05■□□□□ 0.8
ABCF3-217ENST00000489719 MTCH2Q9Y6C9 303 aa20.05■□□□□ 0.8
ABCF3-217ENST00000489719 CHD9Q3L8U1 2897 aa20.05■□□□□ 0.8
ABCF3-217ENST00000489719 DLL1O00548 723 aa20.04■□□□□ 0.8
ABCF3-217ENST00000489719 VTNP04004 478 aa20.04■□□□□ 0.8
ABCF3-217ENST00000489719 CLCN3P51790 818 aa20.04■□□□□ 0.8
ABCF3-217ENST00000489719 HMGN5P82970 282 aaKnown RBP20.04■□□□□ 0.8
ABCF3-217ENST00000489719 ST3GAL1Q11201 340 aa20.04■□□□□ 0.8
ABCF3-217ENST00000489719 GRB10Q13322 594 aa20.04■□□□□ 0.8
ABCF3-217ENST00000489719 TMEM266Q2M3C6 531 aa20.04■□□□□ 0.8
ABCF3-217ENST00000489719 SPRED2Q7Z698 418 aa20.04■□□□□ 0.8
ABCF3-217ENST00000489719 RTN4RL1Q86UN2 441 aaPredicted RBP20.04■□□□□ 0.8
ABCF3-217ENST00000489719 LRRC71Q8N4P6 559 aa20.04■□□□□ 0.8
ABCF3-217ENST00000489719 FAM184AQ8NB25 1140 aa20.04■□□□□ 0.8
ABCF3-217ENST00000489719 BANK1Q8NDB2 785 aa20.04■□□□□ 0.8
ABCF3-217ENST00000489719 SP7Q8TDD2 431 aaPredicted RBP20.04■□□□□ 0.8
ABCF3-217ENST00000489719 TNFRSF25Q93038 417 aa20.04■□□□□ 0.8
ABCF3-217ENST00000489719 C8orf76Q96K31 380 aa20.04■□□□□ 0.8
ABCF3-217ENST00000489719 SAMD11Q96NU1 681 aa20.04■□□□□ 0.8
ABCF3-217ENST00000489719 PPP1R16BQ96T49 567 aa20.04■□□□□ 0.8
ABCF3-217ENST00000489719 NOC2LQ9Y3T9 749 aaKnown RBP20.04■□□□□ 0.8
ABCF3-217ENST00000489719 FAM205CA6NFA0 338 aa20.03■□□□□ 0.8
ABCF3-217ENST00000489719 EML1O00423 815 aa20.03■□□□□ 0.8
ABCF3-217ENST00000489719 P4HBP07237 508 aaKnown RBP20.03■□□□□ 0.8
ABCF3-217ENST00000489719 STAG3L1P0CL83 205 aa20.03■□□□□ 0.8
ABCF3-217ENST00000489719 QARSP47897 775 aaKnown RBP20.03■□□□□ 0.8
ABCF3-217ENST00000489719 DNM2P50570 870 aa20.03■□□□□ 0.8
ABCF3-217ENST00000489719 NLRP11P59045 1033 aaKnown RBP20.03■□□□□ 0.8
ABCF3-217ENST00000489719 GUCY1B3Q02153 619 aa20.03■□□□□ 0.8
ABCF3-217ENST00000489719 RABEP1Q15276 862 aa20.03■□□□□ 0.8
ABCF3-217ENST00000489719 EPHA7Q15375 998 aa20.03■□□□□ 0.8
ABCF3-217ENST00000489719 SKIV2LQ15477 1246 aaKnown RBP20.03■□□□□ 0.8
ABCF3-217ENST00000489719 MTERF2Q49AM1 385 aa20.03■□□□□ 0.8
ABCF3-217ENST00000489719 POTEDQ86YR6 584 aa20.03■□□□□ 0.8
ABCF3-217ENST00000489719 FIBCD1Q8N539 461 aa20.03■□□□□ 0.8
ABCF3-217ENST00000489719 FBXO22Q8NEZ5 403 aa20.03■□□□□ 0.8
ABCF3-217ENST00000489719 HAS1Q92839 578 aa20.03■□□□□ 0.8
ABCF3-217ENST00000489719 OSMRQ99650 979 aa20.03■□□□□ 0.8
ABCF3-217ENST00000489719 RNF216Q9NWF9 866 aaPredicted RBP20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms