RNA–Protein interactions for RNA: ENST00000488594.5

GGPS1-206, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGPS1, Length 1,396 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-206ENST00000488594 ANO3Q9BYT9 981 aa21.71■■□□□ 1.07
GGPS1-206ENST00000488594 GINS2Q9Y248 185 aa21.71■■□□□ 1.07
GGPS1-206ENST00000488594 USP15Q9Y4E8 981 aaPredicted RBP21.71■■□□□ 1.07
GGPS1-206ENST00000488594 CNTNAP5Q8WYK1 1306 aa21.7■■□□□ 1.06
GGPS1-206ENST00000488594 DENND3A2RUS2 1198 aa21.7■■□□□ 1.06
GGPS1-206ENST00000488594 BACH1O14867 736 aa21.7■■□□□ 1.06
GGPS1-206ENST00000488594 GPR182O15218 404 aa21.7■■□□□ 1.06
GGPS1-206ENST00000488594 GLP2RO95838 553 aa21.7■■□□□ 1.06
GGPS1-206ENST00000488594 SREBF1P36956 1147 aa21.7■■□□□ 1.06
GGPS1-206ENST00000488594 COL9A3Q14050 684 aaPredicted RBP21.7■■□□□ 1.06
GGPS1-206ENST00000488594 CBX2Q14781 532 aaPredicted RBP21.7■■□□□ 1.06
GGPS1-206ENST00000488594 SPOUT1Q5T280 376 aaKnown RBP21.7■■□□□ 1.06
GGPS1-206ENST00000488594 TRIM67Q6ZTA4 783 aa21.7■■□□□ 1.06
GGPS1-206ENST00000488594 LRRC2Q9BYS8 371 aa21.7■■□□□ 1.06
GGPS1-206ENST00000488594 TLR9Q9NR96 1032 aa21.7■■□□□ 1.06
GGPS1-206ENST00000488594 RGS18Q9NS28 235 aa21.7■■□□□ 1.06
GGPS1-206ENST00000488594 BARX2Q9UMQ3 279 aaPredicted RBP21.7■■□□□ 1.06
GGPS1-206ENST00000488594 ZNF318Q5VUA4 2279 aa21.69■■□□□ 1.06
GGPS1-206ENST00000488594 PPFIA3O75145 1194 aa21.69■■□□□ 1.06
GGPS1-206ENST00000488594 ZNF76P36508 570 aa21.69■■□□□ 1.06
GGPS1-206ENST00000488594 ZNF484Q5JVG2 852 aa21.69■■□□□ 1.06
GGPS1-206ENST00000488594 TYW1BQ6NUM6 668 aa21.69■■□□□ 1.06
GGPS1-206ENST00000488594 APOA5Q6Q788 366 aa21.69■■□□□ 1.06
GGPS1-206ENST00000488594 ABHD15Q6UXT9 468 aa21.69■■□□□ 1.06
GGPS1-206ENST00000488594 KIAA0319LQ8IZA0 1049 aa21.69■■□□□ 1.06
GGPS1-206ENST00000488594 PRRX2Q99811 253 aa21.69■■□□□ 1.06
GGPS1-206ENST00000488594 ADAM2Q99965 735 aa21.69■■□□□ 1.06
GGPS1-206ENST00000488594 ESYT1Q9BSJ8 1104 aa21.69■■□□□ 1.06
GGPS1-206ENST00000488594 PHF7Q9BWX1 381 aaPredicted RBP21.69■■□□□ 1.06
GGPS1-206ENST00000488594 NOC2LQ9Y3T9 749 aaKnown RBP21.69■■□□□ 1.06
GGPS1-206ENST00000488594 TMEM221A6NGB7 291 aa21.68■■□□□ 1.06
GGPS1-206ENST00000488594 TBKBP1A7MCY6 615 aa21.68■■□□□ 1.06
GGPS1-206ENST00000488594 M0R296 226 aa21.68■■□□□ 1.06
GGPS1-206ENST00000488594 FGF18O76093 207 aa21.68■■□□□ 1.06
GGPS1-206ENST00000488594 CCNE2O96020 404 aa21.68■■□□□ 1.06
GGPS1-206ENST00000488594 ATF7P17544 494 aaPredicted RBP21.68■■□□□ 1.06
GGPS1-206ENST00000488594 RNF20Q5VTR2 975 aa21.68■■□□□ 1.06
GGPS1-206ENST00000488594 MIS18BP1Q6P0N0 1132 aa21.68■■□□□ 1.06
GGPS1-206ENST00000488594 PDXDC2PQ6P474 469 aa21.68■■□□□ 1.06
GGPS1-206ENST00000488594 PBXIP1Q96AQ6 731 aa21.68■■□□□ 1.06
GGPS1-206ENST00000488594 PGBD1Q96JS3 809 aa21.68■■□□□ 1.06
GGPS1-206ENST00000488594 ZNF302Q9NR11 478 aa21.68■■□□□ 1.06
GGPS1-206ENST00000488594 ST3GAL5Q9UNP4 418 aa21.68■■□□□ 1.06
GGPS1-206ENST00000488594 SMCO2A6NFE2 343 aa21.67■■□□□ 1.06
GGPS1-206ENST00000488594 C9IYK1 514 aa21.67■■□□□ 1.06
GGPS1-206ENST00000488594 MGEA5O60502 916 aa21.67■■□□□ 1.06
GGPS1-206ENST00000488594 SRGAP2BP0DMP2 458 aa21.67■■□□□ 1.06
GGPS1-206ENST00000488594 IBSPP21815 317 aaPredicted RBP21.67■■□□□ 1.06
GGPS1-206ENST00000488594 ZXDAP98168 799 aa21.67■■□□□ 1.06
GGPS1-206ENST00000488594 RTN1Q16799 776 aa21.67■■□□□ 1.06
GGPS1-206ENST00000488594 DUSP6Q16828 381 aa21.67■■□□□ 1.06
GGPS1-206ENST00000488594 SUGP1Q8IWZ8 645 aaKnown RBP21.67■■□□□ 1.06
GGPS1-206ENST00000488594 THNSL1Q8IYQ7 743 aa21.67■■□□□ 1.06
GGPS1-206ENST00000488594 TMEM40Q8WWA1 233 aa21.67■■□□□ 1.06
GGPS1-206ENST00000488594 ANO2Q9NQ90 1003 aa21.67■■□□□ 1.06
GGPS1-206ENST00000488594 BARHL2Q9NY43 387 aa21.67■■□□□ 1.06
GGPS1-206ENST00000488594 PCDHGC5Q9Y5F6 944 aa21.67■■□□□ 1.06
GGPS1-206ENST00000488594 V9GY48 417 aaPredicted RBP21.67■■□□□ 1.06
GGPS1-206ENST00000488594 KIAA1671Q9BY89 1806 aa21.66■■□□□ 1.06
GGPS1-206ENST00000488594 TECTAO75443 2155 aa21.66■■□□□ 1.06
GGPS1-206ENST00000488594 DDX39AO00148 427 aaKnown RBP21.66■■□□□ 1.06
GGPS1-206ENST00000488594 ZBTB43O43298 467 aa21.66■■□□□ 1.06
GGPS1-206ENST00000488594 CLK2P49760 499 aaKnown RBP21.66■■□□□ 1.06
GGPS1-206ENST00000488594 CRYBB1P53674 252 aaPredicted RBP21.66■■□□□ 1.06
GGPS1-206ENST00000488594 FUT2Q10981 343 aa21.66■■□□□ 1.06
GGPS1-206ENST00000488594 CCDC60Q8IWA6 550 aaPredicted RBP21.66■■□□□ 1.06
GGPS1-206ENST00000488594 NEK1Q96PY6 1258 aa21.66■■□□□ 1.06
GGPS1-206ENST00000488594 ELAC1Q9H777 363 aaKnown RBP21.66■■□□□ 1.06
GGPS1-206ENST00000488594 CDHR5Q9HBB8 845 aa21.66■■□□□ 1.06
GGPS1-206ENST00000488594 ATP6V0A4Q9HBG4 840 aa21.66■■□□□ 1.06
GGPS1-206ENST00000488594 TMEM161AQ9NX61 479 aa21.66■■□□□ 1.06
GGPS1-206ENST00000488594 LZTS1Q9Y250 596 aa21.66■■□□□ 1.06
GGPS1-206ENST00000488594 C5orf42Q9H799 3197 aa21.66■■□□□ 1.06
GGPS1-206ENST00000488594 PER2O15055 1255 aa21.65■■□□□ 1.06
GGPS1-206ENST00000488594 LAG3P18627 525 aa21.65■■□□□ 1.06
GGPS1-206ENST00000488594 PTPN5P54829 565 aa21.65■■□□□ 1.06
GGPS1-206ENST00000488594 FAM102BQ5T8I3 360 aa21.65■■□□□ 1.06
GGPS1-206ENST00000488594 PLA2G4DQ86XP0 818 aa21.65■■□□□ 1.06
GGPS1-206ENST00000488594 COLGALT1Q8NBJ5 622 aa21.65■■□□□ 1.06
GGPS1-206ENST00000488594 BBXQ8WY36 941 aaPredicted RBP21.65■■□□□ 1.06
GGPS1-206ENST00000488594 SUSD6Q92537 303 aa21.65■■□□□ 1.06
GGPS1-206ENST00000488594 TYW1Q9NV66 732 aaKnown RBP21.65■■□□□ 1.06
GGPS1-206ENST00000488594 TMEM260Q9NX78 707 aa21.65■■□□□ 1.06
GGPS1-206ENST00000488594 PUF60Q9UHX1 559 aaKnown RBP21.65■■□□□ 1.06
GGPS1-206ENST00000488594 ZBTB42B2RXF5 422 aa21.64■■□□□ 1.06
GGPS1-206ENST00000488594 IPO5O00410 1097 aaKnown RBP21.64■■□□□ 1.06
GGPS1-206ENST00000488594 FSCN2O14926 492 aa21.64■■□□□ 1.06
GGPS1-206ENST00000488594 FAM189BP81408 668 aa21.64■■□□□ 1.06
GGPS1-206ENST00000488594 KIZQ2M2Z5 673 aa21.64■■□□□ 1.06
GGPS1-206ENST00000488594 SWSAP1Q6NVH7 229 aa21.64■■□□□ 1.06
GGPS1-206ENST00000488594 TMEM184AQ6ZMB5 413 aa21.64■■□□□ 1.06
GGPS1-206ENST00000488594 CKAP2LQ8IYA6 745 aa21.64■■□□□ 1.06
GGPS1-206ENST00000488594 RPGRIP1Q96KN7 1286 aa21.64■■□□□ 1.06
GGPS1-206ENST00000488594 CEP131Q9UPN4 1083 aa21.64■■□□□ 1.06
GGPS1-206ENST00000488594 FAM86B1E9PN63 330 aa21.63■■□□□ 1.05
GGPS1-206ENST00000488594 DHX15O43143 795 aaKnown RBP21.63■■□□□ 1.05
GGPS1-206ENST00000488594 HOXA2O43364 376 aa21.63■■□□□ 1.05
GGPS1-206ENST00000488594 C22orf31O95567 290 aa21.63■■□□□ 1.05
GGPS1-206ENST00000488594 CYP3A4P08684 503 aa21.63■■□□□ 1.05
GGPS1-206ENST00000488594 FAM86B2P0C5J1 330 aa21.63■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 140.8 ms