RNA–Protein interactions for RNA: ENST00000487890.5

GPNMB-212, Transcript of glycoprotein nmb, humanhuman

TSL 5

Gene GPNMB, Length 577 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-212ENST00000487890 ARHGAP36Q6ZRI8 547 aa4.22□□□□□ -1.73
GPNMB-212ENST00000487890 WAPLQ7Z5K2 1190 aa4.22□□□□□ -1.73
GPNMB-212ENST00000487890 ZAR1Q86SH2 424 aa4.22□□□□□ -1.73
GPNMB-212ENST00000487890 NLRP10Q86W26 655 aa4.22□□□□□ -1.73
GPNMB-212ENST00000487890 PTRH1Q86Y79 214 aaKnown RBP4.22□□□□□ -1.73
GPNMB-212ENST00000487890 KIAA1958Q8N8K9 716 aa4.22□□□□□ -1.73
GPNMB-212ENST00000487890 TGFBRAP1Q8WUH2 860 aa4.22□□□□□ -1.73
GPNMB-212ENST00000487890 LRRC59Q96AG4 307 aaKnown RBP4.22□□□□□ -1.73
GPNMB-212ENST00000487890 RUNDC1Q96C34 613 aa4.22□□□□□ -1.73
GPNMB-212ENST00000487890 SCYL1Q96KG9 808 aa4.22□□□□□ -1.73
GPNMB-212ENST00000487890 HSPA12BQ96MM6 686 aa4.22□□□□□ -1.73
GPNMB-212ENST00000487890 TBC1D32Q96NH3 1257 aa4.22□□□□□ -1.73
GPNMB-212ENST00000487890 ORAI2Q96SN7 254 aa4.22□□□□□ -1.73
GPNMB-212ENST00000487890 CDADC1Q9BWV3 514 aa4.22□□□□□ -1.73
GPNMB-212ENST00000487890 ZMAT4Q9H898 229 aa4.22□□□□□ -1.73
GPNMB-212ENST00000487890 TOMM22Q9NS69 142 aa4.22□□□□□ -1.73
GPNMB-212ENST00000487890 BTG4Q9NY30 223 aa4.22□□□□□ -1.73
GPNMB-212ENST00000487890 NOP53Q9NZM5 478 aaKnown RBP4.22□□□□□ -1.73
GPNMB-212ENST00000487890 ZSWIM5Q9P217 1185 aa4.22□□□□□ -1.73
GPNMB-212ENST00000487890 SAP30BPQ9UHR5 308 aaKnown RBP4.22□□□□□ -1.73
GPNMB-212ENST00000487890 TAGLN3Q9UI15 199 aa4.22□□□□□ -1.73
GPNMB-212ENST00000487890 FAM50BQ9Y247 325 aa4.22□□□□□ -1.73
GPNMB-212ENST00000487890 SPO11Q9Y5K1 396 aa4.22□□□□□ -1.73
GPNMB-212ENST00000487890 MRFAP1Q9Y605 127 aa4.22□□□□□ -1.73
GPNMB-212ENST00000487890 AFF2P51816 1311 aa4.21□□□□□ -1.73
GPNMB-212ENST00000487890 FRMPD2Q68DX3 1309 aaPredicted RBP4.21□□□□□ -1.73
GPNMB-212ENST00000487890 FMN2Q9NZ56 1722 aa4.21□□□□□ -1.73
GPNMB-212ENST00000487890 MARF1Q9Y4F3 1742 aaKnown RBP4.21□□□□□ -1.73
GPNMB-212ENST00000487890 SSU72P8A0A1W2PR75 194 aa4.21□□□□□ -1.74
GPNMB-212ENST00000487890 HMX2A2RU54 273 aa4.21□□□□□ -1.74
GPNMB-212ENST00000487890 IFRD1O00458 451 aaPredicted RBP4.21□□□□□ -1.74
GPNMB-212ENST00000487890 PIK3R2O00459 728 aa4.21□□□□□ -1.74
GPNMB-212ENST00000487890 NKRFO15226 690 aaKnown RBP eCLIP4.21□□□□□ -1.74
GPNMB-212ENST00000487890 MYO1BO43795 1136 aa4.21□□□□□ -1.74
GPNMB-212ENST00000487890 NBPF7P0C2Y1 421 aaPredicted RBP4.21□□□□□ -1.74
GPNMB-212ENST00000487890 PTX3P26022 381 aaPredicted RBP4.21□□□□□ -1.74
GPNMB-212ENST00000487890 COL8A1P27658 744 aa4.21□□□□□ -1.74
GPNMB-212ENST00000487890 LSP1P33241 339 aa4.21□□□□□ -1.74
GPNMB-212ENST00000487890 OXCT1P55809 520 aa4.21□□□□□ -1.74
GPNMB-212ENST00000487890 IRF9Q00978 393 aa4.21□□□□□ -1.74
GPNMB-212ENST00000487890 ACAP2Q15057 778 aa4.21□□□□□ -1.74
GPNMB-212ENST00000487890 GPR19Q15760 415 aa4.21□□□□□ -1.74
GPNMB-212ENST00000487890 IFI16Q16666 785 aaKnown RBP4.21□□□□□ -1.74
GPNMB-212ENST00000487890 GAB4Q2WGN9 574 aa4.21□□□□□ -1.74
GPNMB-212ENST00000487890 HHIPL2Q6UWX4 724 aa4.21□□□□□ -1.74
GPNMB-212ENST00000487890 CEP68Q76N32 757 aa4.21□□□□□ -1.74
GPNMB-212ENST00000487890 ZNF765Q7L2R6 523 aa4.21□□□□□ -1.74
GPNMB-212ENST00000487890 APBB1IPQ7Z5R6 666 aaPredicted RBP4.21□□□□□ -1.74
GPNMB-212ENST00000487890 CLEC10AQ8IUN9 316 aa4.21□□□□□ -1.74
GPNMB-212ENST00000487890 ZNF610Q8N9Z0 462 aa4.21□□□□□ -1.74
GPNMB-212ENST00000487890 SLC35G2Q8TBE7 412 aa4.21□□□□□ -1.74
GPNMB-212ENST00000487890 PANK1Q8TE04 598 aa4.21□□□□□ -1.74
GPNMB-212ENST00000487890 SH3RF2Q8TEC5 729 aa4.21□□□□□ -1.74
GPNMB-212ENST00000487890 JADE3Q92613 823 aa4.21□□□□□ -1.74
GPNMB-212ENST00000487890 UBE2FQ969M7 185 aa4.21□□□□□ -1.74
GPNMB-212ENST00000487890 TEKT5Q96M29 485 aa4.21□□□□□ -1.74
GPNMB-212ENST00000487890 AIFM3Q96NN9 605 aa4.21□□□□□ -1.74
GPNMB-212ENST00000487890 FAM83CQ9BQN1 747 aa4.21□□□□□ -1.74
GPNMB-212ENST00000487890 ZDHHC5Q9C0B5 715 aa4.21□□□□□ -1.74
GPNMB-212ENST00000487890 TRIT1Q9H3H1 467 aaKnown RBP4.21□□□□□ -1.74
GPNMB-212ENST00000487890 POGKQ9P215 609 aa4.21□□□□□ -1.74
GPNMB-212ENST00000487890 ZNF281Q9Y2X9 895 aa4.21□□□□□ -1.74
GPNMB-212ENST00000487890 DAAM1Q9Y4D1 1078 aa4.21□□□□□ -1.74
GPNMB-212ENST00000487890 LRPPRCP42704 1394 aaKnown RBP4.21□□□□□ -1.74
GPNMB-212ENST00000487890 PNPLA6Q8IY17 1366 aa4.21□□□□□ -1.74
GPNMB-212ENST00000487890 CDC42BPGQ6DT37 1551 aa4.21□□□□□ -1.74
GPNMB-212ENST00000487890 KAT6BQ8WYB5 2073 aa4.21□□□□□ -1.74
GPNMB-212ENST00000487890 PIK3C2GO75747 1445 aa4.21□□□□□ -1.74
GPNMB-212ENST00000487890 YTHDC2Q9H6S0 1430 aaKnown RBP4.21□□□□□ -1.74
GPNMB-212ENST00000487890 NPHP3Q7Z494 1330 aa4.21□□□□□ -1.74
GPNMB-212ENST00000487890 KIF1AQ12756 1690 aa4.2□□□□□ -1.74
GPNMB-212ENST00000487890 DHX57Q6P158 1386 aaKnown RBP4.2□□□□□ -1.74
GPNMB-212ENST00000487890 PLEKHH1Q9ULM0 1364 aa4.2□□□□□ -1.74
GPNMB-212ENST00000487890 H3BS24 57 aa4.2□□□□□ -1.74
GPNMB-212ENST00000487890 H7BY64 318 aa4.2□□□□□ -1.74
GPNMB-212ENST00000487890 MAN2B1O00754 1011 aa4.2□□□□□ -1.74
GPNMB-212ENST00000487890 DHX15O43143 795 aaKnown RBP4.2□□□□□ -1.74
GPNMB-212ENST00000487890 AP1G1O43747 822 aa4.2□□□□□ -1.74
GPNMB-212ENST00000487890 NPHS1O60500 1241 aa4.2□□□□□ -1.74
GPNMB-212ENST00000487890 TBC1D8O95759 1140 aa4.2□□□□□ -1.74
GPNMB-212ENST00000487890 IFIT2P09913 472 aaKnown RBP4.2□□□□□ -1.74
GPNMB-212ENST00000487890 MYBP10242 640 aa4.2□□□□□ -1.74
GPNMB-212ENST00000487890 PAX3P23760 479 aa4.2□□□□□ -1.74
GPNMB-212ENST00000487890 FPR2P25090 351 aa4.2□□□□□ -1.74
GPNMB-212ENST00000487890 SERPINB3P29508 390 aa4.2□□□□□ -1.74
GPNMB-212ENST00000487890 GTF2A2P52657 109 aa4.2□□□□□ -1.74
GPNMB-212ENST00000487890 PICALMQ13492 652 aa4.2□□□□□ -1.74
GPNMB-212ENST00000487890 MORC3Q14149 939 aa4.2□□□□□ -1.74
GPNMB-212ENST00000487890 ZNF267Q14586 743 aaPredicted RBP4.2□□□□□ -1.74
GPNMB-212ENST00000487890 SEC23AQ15436 765 aa4.2□□□□□ -1.74
GPNMB-212ENST00000487890 ZNF174Q15697 407 aa4.2□□□□□ -1.74
GPNMB-212ENST00000487890 LONRF3Q496Y0 759 aa4.2□□□□□ -1.74
GPNMB-212ENST00000487890 CYP27C1Q4G0S4 372 aa4.2□□□□□ -1.74
GPNMB-212ENST00000487890 RRP12Q5JTH9 1297 aaKnown RBP4.2□□□□□ -1.74
GPNMB-212ENST00000487890 HABP4Q5JVS0 413 aaKnown RBP4.2□□□□□ -1.74
GPNMB-212ENST00000487890 GPR158Q5T848 1215 aa4.2□□□□□ -1.74
GPNMB-212ENST00000487890 CPZQ66K79 652 aa4.2□□□□□ -1.74
GPNMB-212ENST00000487890 RNF111Q6ZNA4 994 aa4.2□□□□□ -1.74
GPNMB-212ENST00000487890 C11orf96Q7Z7L8 435 aa4.2□□□□□ -1.74
GPNMB-212ENST00000487890 NOSTRINQ8IVI9 506 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms