RNA–Protein interactions for RNA: ENST00000479099.2

RC3H1-204, Transcript of ring finger and CCCH-type domains 1, humanhuman

TSL 3

Gene RC3H1, Length 481 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-204ENST00000479099 CDCP2Q5VXM1 449 aa6.74□□□□□ -1.33
RC3H1-204ENST00000479099 CDPF1Q6NVV7 123 aa6.74□□□□□ -1.33
RC3H1-204ENST00000479099 LLGL2Q6P1M3 1020 aa6.74□□□□□ -1.33
RC3H1-204ENST00000479099 RTL10Q7L3V2 364 aa6.74□□□□□ -1.33
RC3H1-204ENST00000479099 DAAM2Q86T65 1068 aa6.74□□□□□ -1.33
RC3H1-204ENST00000479099 NRSN1Q8IZ57 195 aa6.74□□□□□ -1.33
RC3H1-204ENST00000479099 FBXL6Q8N531 539 aa6.74□□□□□ -1.33
RC3H1-204ENST00000479099 CLRN3Q8NCR9 226 aa6.74□□□□□ -1.33
RC3H1-204ENST00000479099 FBLIM1Q8WUP2 373 aa6.74□□□□□ -1.33
RC3H1-204ENST00000479099 EZH1Q92800 747 aaPredicted RBP6.74□□□□□ -1.33
RC3H1-204ENST00000479099 ARL8AQ96BM9 186 aa6.74□□□□□ -1.33
RC3H1-204ENST00000479099 CENPTQ96BT3 561 aa6.74□□□□□ -1.33
RC3H1-204ENST00000479099 HIC2Q96JB3 615 aa6.74□□□□□ -1.33
RC3H1-204ENST00000479099 TEKT5Q96M29 485 aa6.74□□□□□ -1.33
RC3H1-204ENST00000479099 NT5C1BQ96P26 610 aa6.74□□□□□ -1.33
RC3H1-204ENST00000479099 APOL5Q9BWW9 433 aa6.74□□□□□ -1.33
RC3H1-204ENST00000479099 OSBPL1AQ9BXW6 950 aa6.74□□□□□ -1.33
RC3H1-204ENST00000479099 ABCG4Q9H172 646 aa6.74□□□□□ -1.33
RC3H1-204ENST00000479099 BHMT2Q9H2M3 363 aa6.74□□□□□ -1.33
RC3H1-204ENST00000479099 BRD9Q9H8M2 597 aa6.74□□□□□ -1.33
RC3H1-204ENST00000479099 WASH6PQ9NQA3 447 aa6.74□□□□□ -1.33
RC3H1-204ENST00000479099 SAMD15Q9P1V8 674 aa6.74□□□□□ -1.33
RC3H1-204ENST00000479099 XPO7Q9UIA9 1087 aaKnown RBP6.74□□□□□ -1.33
RC3H1-204ENST00000479099 GPR34Q9UPC5 381 aa6.74□□□□□ -1.33
RC3H1-204ENST00000479099 SLC22A31A6NKX4 558 aa6.73□□□□□ -1.33
RC3H1-204ENST00000479099 F5H0A9 414 aaPredicted RBP6.73□□□□□ -1.33
RC3H1-204ENST00000479099 HTATSF1O43719 755 aaKnown RBP6.73□□□□□ -1.33
RC3H1-204ENST00000479099 DKC1O60832 514 aaKnown RBP eCLIP6.73□□□□□ -1.33
RC3H1-204ENST00000479099 TBX18O95935 607 aa6.73□□□□□ -1.33
RC3H1-204ENST00000479099 CSTBP04080 98 aaKnown RBP6.73□□□□□ -1.33
RC3H1-204ENST00000479099 ADH5P11766 374 aa6.73□□□□□ -1.33
RC3H1-204ENST00000479099 TAL1P17542 331 aaPredicted RBP6.73□□□□□ -1.33
RC3H1-204ENST00000479099 MAN2A2P49641 1150 aa6.73□□□□□ -1.33
RC3H1-204ENST00000479099 ARL4CP56559 192 aa6.73□□□□□ -1.33
RC3H1-204ENST00000479099 OCRLQ01968 901 aa6.73□□□□□ -1.33
RC3H1-204ENST00000479099 PPP2R3AQ06190 1150 aa6.73□□□□□ -1.33
RC3H1-204ENST00000479099 PPP2R5CQ13362 524 aa6.73□□□□□ -1.33
RC3H1-204ENST00000479099 SLC14A2Q15849 920 aa6.73□□□□□ -1.33
RC3H1-204ENST00000479099 PKN2Q16513 984 aaKnown RBP6.73□□□□□ -1.33
RC3H1-204ENST00000479099 TAF12Q16514 161 aa6.73□□□□□ -1.33
RC3H1-204ENST00000479099 ZNF423Q2M1K9 1284 aa6.73□□□□□ -1.33
RC3H1-204ENST00000479099 BBS9Q3SYG4 887 aa6.73□□□□□ -1.33
RC3H1-204ENST00000479099 IZUMO3Q5VZ72 239 aa6.73□□□□□ -1.33
RC3H1-204ENST00000479099 LILRA6Q6PI73 481 aa6.73□□□□□ -1.33
RC3H1-204ENST00000479099 RFX8Q6ZV50 586 aa6.73□□□□□ -1.33
RC3H1-204ENST00000479099 TTC30AQ86WT1 665 aa6.73□□□□□ -1.33
RC3H1-204ENST00000479099 TMTC1Q8IUR5 882 aa6.73□□□□□ -1.33
RC3H1-204ENST00000479099 KIAA0319LQ8IZA0 1049 aa6.73□□□□□ -1.33
RC3H1-204ENST00000479099 LRRN4CLQ8ND94 238 aa6.73□□□□□ -1.33
RC3H1-204ENST00000479099 OR8H1Q8NGG4 311 aa6.73□□□□□ -1.33
RC3H1-204ENST00000479099 ZSCAN31Q96LW9 406 aaPredicted RBP6.73□□□□□ -1.33
RC3H1-204ENST00000479099 ASB2Q96Q27 587 aa6.73□□□□□ -1.33
RC3H1-204ENST00000479099 METTL22Q9BUU2 404 aaPredicted RBP6.73□□□□□ -1.33
RC3H1-204ENST00000479099 TMEM120AQ9BXJ8 343 aa6.73□□□□□ -1.33
RC3H1-204ENST00000479099 CERS4Q9HA82 394 aa6.73□□□□□ -1.33
RC3H1-204ENST00000479099 GOLGA2P5Q9HBQ8 144 aa6.73□□□□□ -1.33
RC3H1-204ENST00000479099 ITM2CQ9NQX7 267 aa6.73□□□□□ -1.33
RC3H1-204ENST00000479099 PA2G4Q9UQ80 394 aaKnown RBP6.73□□□□□ -1.33
RC3H1-204ENST00000479099 FSD2A1L4K1 749 aa6.72□□□□□ -1.33
RC3H1-204ENST00000479099 TSPY2A6NKD2 308 aa6.72□□□□□ -1.33
RC3H1-204ENST00000479099 GAS7O60861 476 aa6.72□□□□□ -1.33
RC3H1-204ENST00000479099 SOD2P04179 222 aa6.72□□□□□ -1.33
RC3H1-204ENST00000479099 TSPY3P0CV98 308 aa6.72□□□□□ -1.33
RC3H1-204ENST00000479099 TSPY8P0CW00 308 aa6.72□□□□□ -1.33
RC3H1-204ENST00000479099 MTHFD1P11586 935 aaKnown RBP6.72□□□□□ -1.33
RC3H1-204ENST00000479099 ATF7P17544 494 aaPredicted RBP6.72□□□□□ -1.33
RC3H1-204ENST00000479099 TNFSF4P23510 183 aa6.72□□□□□ -1.33
RC3H1-204ENST00000479099 GRK2P25098 689 aa6.72□□□□□ -1.33
RC3H1-204ENST00000479099 MAOBP27338 520 aa6.72□□□□□ -1.33
RC3H1-204ENST00000479099 TSPY1Q01534 308 aa6.72□□□□□ -1.33
RC3H1-204ENST00000479099 PTPN11Q06124 597 aaPredicted RBP6.72□□□□□ -1.33
RC3H1-204ENST00000479099 POU4F3Q15319 338 aa6.72□□□□□ -1.33
RC3H1-204ENST00000479099 MEA1Q16626 185 aa6.72□□□□□ -1.33
RC3H1-204ENST00000479099 MFSD4BQ5TF39 518 aa6.72□□□□□ -1.33
RC3H1-204ENST00000479099 ENOSF1Q7L5Y1 443 aa6.72□□□□□ -1.33
RC3H1-204ENST00000479099 MAMDC2Q7Z304 686 aaPredicted RBP6.72□□□□□ -1.33
RC3H1-204ENST00000479099 MILR1Q7Z6M3 343 aa6.72□□□□□ -1.33
RC3H1-204ENST00000479099 DDX53Q86TM3 631 aaKnown RBP6.72□□□□□ -1.33
RC3H1-204ENST00000479099 ESX1Q8N693 406 aa6.72□□□□□ -1.33
RC3H1-204ENST00000479099 DDX54Q8TDD1 881 aaKnown RBP6.72□□□□□ -1.33
RC3H1-204ENST00000479099 TRAPPC12Q8WVT3 735 aa6.72□□□□□ -1.33
RC3H1-204ENST00000479099 SNX21Q969T3 373 aa6.72□□□□□ -1.33
RC3H1-204ENST00000479099 STK31Q9BXU1 1019 aa6.72□□□□□ -1.33
RC3H1-204ENST00000479099 GTPBP4Q9BZE4 634 aaKnown RBP6.72□□□□□ -1.33
RC3H1-204ENST00000479099 NUP62CLQ9H1M0 184 aa6.72□□□□□ -1.33
RC3H1-204ENST00000479099 DMRT3Q9NQL9 472 aa6.72□□□□□ -1.33
RC3H1-204ENST00000479099 SPTLC3Q9NUV7 552 aa6.72□□□□□ -1.33
RC3H1-204ENST00000479099 L1RE1Q9UN81 338 aa6.72□□□□□ -1.33
RC3H1-204ENST00000479099 FAM86C2PA6NEL3 165 aa6.71□□□□□ -1.34
RC3H1-204ENST00000479099 H3BML4 177 aa6.71□□□□□ -1.34
RC3H1-204ENST00000479099 DLX3O60479 287 aa6.71□□□□□ -1.34
RC3H1-204ENST00000479099 GLRX3O76003 335 aaKnown RBP6.71□□□□□ -1.34
RC3H1-204ENST00000479099 B3GALT4O96024 378 aa6.71□□□□□ -1.34
RC3H1-204ENST00000479099 DNTTP04053 509 aa6.71□□□□□ -1.34
RC3H1-204ENST00000479099 KCNA6P17658 529 aa6.71□□□□□ -1.34
RC3H1-204ENST00000479099 MUTP22033 750 aa6.71□□□□□ -1.34
RC3H1-204ENST00000479099 PEX2P28328 305 aa6.71□□□□□ -1.34
RC3H1-204ENST00000479099 PIK3CBP42338 1070 aa6.71□□□□□ -1.34
RC3H1-204ENST00000479099 TXKP42681 527 aa6.71□□□□□ -1.34
RC3H1-204ENST00000479099 PAPOLAP51003 745 aaKnown RBP6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms