RNA–Protein interactions for RNA: ENST00000471372.1

SMC5-202, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-202ENST00000471372 MAP3K14Q99558 947 aa8.36□□□□□ -1.07
SMC5-202ENST00000471372 UBA5Q9GZZ9 404 aa8.36□□□□□ -1.07
SMC5-202ENST00000471372 PLCB1Q9NQ66 1216 aa8.36□□□□□ -1.07
SMC5-202ENST00000471372 IMPACTQ9P2X3 320 aa8.36□□□□□ -1.07
SMC5-202ENST00000471372 PRSS38A1L453 326 aa8.35□□□□□ -1.07
SMC5-202ENST00000471372 PRAMEF25A6NGN4 478 aa8.35□□□□□ -1.07
SMC5-202ENST00000471372 FOXP2O15409 715 aa8.35□□□□□ -1.07
SMC5-202ENST00000471372 PDCP20941 246 aa8.35□□□□□ -1.07
SMC5-202ENST00000471372 GJA4P35212 333 aa8.35□□□□□ -1.07
SMC5-202ENST00000471372 RALBP1Q15311 655 aa8.35□□□□□ -1.07
SMC5-202ENST00000471372 EMC4Q5J8M3 183 aa8.35□□□□□ -1.07
SMC5-202ENST00000471372 XRRA1Q6P2D8 792 aa8.35□□□□□ -1.07
SMC5-202ENST00000471372 USP45Q70EL2 814 aa8.35□□□□□ -1.07
SMC5-202ENST00000471372 SRGAP1Q7Z6B7 1085 aa8.35□□□□□ -1.07
SMC5-202ENST00000471372 SRLQ86TD4 932 aa8.35□□□□□ -1.07
SMC5-202ENST00000471372 C7orf31Q8N865 590 aa8.35□□□□□ -1.07
SMC5-202ENST00000471372 ENAHQ8N8S7 591 aaPredicted RBP8.35□□□□□ -1.07
SMC5-202ENST00000471372 LINC01599Q8WXQ3 324 aa8.35□□□□□ -1.07
SMC5-202ENST00000471372 ERCC4Q92889 916 aaPredicted RBP8.35□□□□□ -1.07
SMC5-202ENST00000471372 COA7Q96BR5 231 aa8.35□□□□□ -1.07
SMC5-202ENST00000471372 MVB12AQ96EY5 273 aa8.35□□□□□ -1.07
SMC5-202ENST00000471372 SMOC1Q9H4F8 434 aa8.35□□□□□ -1.07
SMC5-202ENST00000471372 FAM204AQ9H8W3 233 aa8.35□□□□□ -1.07
SMC5-202ENST00000471372 RC3H2Q9HBD1 1191 aaKnown RBP8.35□□□□□ -1.07
SMC5-202ENST00000471372 CYP26A1O43174 497 aa8.34□□□□□ -1.07
SMC5-202ENST00000471372 TADA3O75528 432 aa8.34□□□□□ -1.07
SMC5-202ENST00000471372 TCEA3O75764 348 aa8.34□□□□□ -1.07
SMC5-202ENST00000471372 MMEP08473 750 aa8.34□□□□□ -1.07
SMC5-202ENST00000471372 CORO7P57737 925 aa8.34□□□□□ -1.07
SMC5-202ENST00000471372 RTP1P59025 263 aa8.34□□□□□ -1.07
SMC5-202ENST00000471372 MRPS9P82933 396 aaKnown RBP8.34□□□□□ -1.07
SMC5-202ENST00000471372 MVKQ03426 396 aa8.34□□□□□ -1.07
SMC5-202ENST00000471372 KIR3DS1Q14943 382 aa8.34□□□□□ -1.07
SMC5-202ENST00000471372 CCDC149Q6ZUS6 474 aa8.34□□□□□ -1.07
SMC5-202ENST00000471372 NME9Q86XW9 330 aa8.34□□□□□ -1.07
SMC5-202ENST00000471372 PHYKPLQ8IUZ5 450 aa8.34□□□□□ -1.07
SMC5-202ENST00000471372 THEMISQ8N1K5 641 aaPredicted RBP8.34□□□□□ -1.07
SMC5-202ENST00000471372 CLEC4DQ8WXI8 215 aa8.34□□□□□ -1.07
SMC5-202ENST00000471372 TNIP3Q96KP6 325 aa8.34□□□□□ -1.07
SMC5-202ENST00000471372 NLRC4Q9NPP4 1024 aa8.34□□□□□ -1.07
SMC5-202ENST00000471372 FNIP2Q9P278 1114 aa8.34□□□□□ -1.07
SMC5-202ENST00000471372 ZC3H7BQ9UGR2 993 aaKnown RBP8.34□□□□□ -1.07
SMC5-202ENST00000471372 PCDHGB6Q9Y5F9 930 aa8.34□□□□□ -1.07
SMC5-202ENST00000471372 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.33□□□□□ -1.08
SMC5-202ENST00000471372 HGSO14964 777 aaPredicted RBP8.33□□□□□ -1.08
SMC5-202ENST00000471372 NRDCO43847 1150 aa8.33□□□□□ -1.08
SMC5-202ENST00000471372 TUSC2O75896 110 aa8.33□□□□□ -1.08
SMC5-202ENST00000471372 ALDH5A1P51649 535 aaPredicted RBP8.33□□□□□ -1.08
SMC5-202ENST00000471372 AK2P54819 239 aa8.33□□□□□ -1.08
SMC5-202ENST00000471372 ALDH6A1Q02252 535 aaKnown RBP8.33□□□□□ -1.08
SMC5-202ENST00000471372 LONRF1Q17RB8 773 aa8.33□□□□□ -1.08
SMC5-202ENST00000471372 CYP4F22Q6NT55 531 aa8.33□□□□□ -1.08
SMC5-202ENST00000471372 CEP128Q6ZU80 1094 aa8.33□□□□□ -1.08
SMC5-202ENST00000471372 FAM186BQ8IYM0 893 aa8.33□□□□□ -1.08
SMC5-202ENST00000471372 CAMKK1Q8N5S9 505 aa8.33□□□□□ -1.08
SMC5-202ENST00000471372 ASB15Q8WXK1 588 aa8.33□□□□□ -1.08
SMC5-202ENST00000471372 FOXRED1Q96CU9 486 aaPredicted RBP8.33□□□□□ -1.08
SMC5-202ENST00000471372 ASIC4Q96FT7 647 aa8.33□□□□□ -1.08
SMC5-202ENST00000471372 MYL10Q9BUA6 226 aa8.33□□□□□ -1.08
SMC5-202ENST00000471372 KCTD10Q9H3F6 313 aa8.33□□□□□ -1.08
SMC5-202ENST00000471372 MYOTQ9UBF9 498 aa8.33□□□□□ -1.08
SMC5-202ENST00000471372 ASH2LQ9UBL3 628 aa8.33□□□□□ -1.08
SMC5-202ENST00000471372 DPP7Q9UHL4 492 aa8.33□□□□□ -1.08
SMC5-202ENST00000471372 DMTF1Q9Y222 760 aa8.33□□□□□ -1.08
SMC5-202ENST00000471372 NUB1Q9Y5A7 615 aa8.33□□□□□ -1.08
SMC5-202ENST00000471372 ACOT7O00154 380 aa8.32□□□□□ -1.08
SMC5-202ENST00000471372 MAFKO60675 156 aa8.32□□□□□ -1.08
SMC5-202ENST00000471372 APOL3O95236 402 aa8.32□□□□□ -1.08
SMC5-202ENST00000471372 FGAP02671 866 aa8.32□□□□□ -1.08
SMC5-202ENST00000471372 HRGP04196 525 aa8.32□□□□□ -1.08
SMC5-202ENST00000471372 MTHFD2P13995 350 aa8.32□□□□□ -1.08
SMC5-202ENST00000471372 ECE1P42892 770 aa8.32□□□□□ -1.08
SMC5-202ENST00000471372 GRIN1Q05586 938 aa8.32□□□□□ -1.08
SMC5-202ENST00000471372 AOC3Q16853 763 aa8.32□□□□□ -1.08
SMC5-202ENST00000471372 MUM1Q2TAK8 710 aa8.32□□□□□ -1.08
SMC5-202ENST00000471372 RTN4RL1Q86UN2 441 aaPredicted RBP8.32□□□□□ -1.08
SMC5-202ENST00000471372 IFNL2Q8IZJ0 200 aa8.32□□□□□ -1.08
SMC5-202ENST00000471372 PRR18Q8N4B5 295 aa8.32□□□□□ -1.08
SMC5-202ENST00000471372 AUTS2Q8WXX7 1259 aa8.32□□□□□ -1.08
SMC5-202ENST00000471372 PPM1EQ8WY54 764 aa8.32□□□□□ -1.08
SMC5-202ENST00000471372 FERMT2Q96AC1 680 aa8.32□□□□□ -1.08
SMC5-202ENST00000471372 SYTL4Q96C24 671 aaPredicted RBP8.32□□□□□ -1.08
SMC5-202ENST00000471372 C1GALT1C1Q96EU7 318 aa8.32□□□□□ -1.08
SMC5-202ENST00000471372 RAX2Q96IS3 184 aa8.32□□□□□ -1.08
SMC5-202ENST00000471372 HRASLS5Q96KN8 279 aa8.32□□□□□ -1.08
SMC5-202ENST00000471372 GBP4Q96PP9 640 aa8.32□□□□□ -1.08
SMC5-202ENST00000471372 MYD88Q99836 296 aa8.32□□□□□ -1.08
SMC5-202ENST00000471372 GNL3LQ9NVN8 582 aaKnown RBP8.32□□□□□ -1.08
SMC5-202ENST00000471372 TMPRSS11EQ9UL52 423 aa8.32□□□□□ -1.08
SMC5-202ENST00000471372 SIT1Q9Y3P8 196 aa8.32□□□□□ -1.08
SMC5-202ENST00000471372 A0A1W2PQ27 194 aa8.31□□□□□ -1.08
SMC5-202ENST00000471372 A0A1W2PQ64 194 aa8.31□□□□□ -1.08
SMC5-202ENST00000471372 A0A1W2PQC6 194 aa8.31□□□□□ -1.08
SMC5-202ENST00000471372 A0A1W2PQD8 194 aa8.31□□□□□ -1.08
SMC5-202ENST00000471372 UBA6A0AVT1 1052 aaPredicted RBP8.31□□□□□ -1.08
SMC5-202ENST00000471372 H3BML4 177 aa8.31□□□□□ -1.08
SMC5-202ENST00000471372 PQBP1O60828 265 aaKnown RBP8.31□□□□□ -1.08
SMC5-202ENST00000471372 ZGLP1P0C6A0 271 aa8.31□□□□□ -1.08
SMC5-202ENST00000471372 KIR2DL1P43626 348 aaPredicted RBP8.31□□□□□ -1.08
SMC5-202ENST00000471372 KIR2DL2P43627 348 aaPredicted RBP8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms