RNA–Protein interactions for RNA: ENST00000471181.6

BRCA1-210, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-210ENST00000471181 FTCDO95954 541 aa7.37□□□□□ -1.23
BRCA1-210ENST00000471181 CXCR5P32302 372 aa7.37□□□□□ -1.23
BRCA1-210ENST00000471181 MYO1EQ12965 1108 aa7.37□□□□□ -1.23
BRCA1-210ENST00000471181 HDAC1Q13547 482 aaPredicted RBP7.37□□□□□ -1.23
BRCA1-210ENST00000471181 ODR4Q5SWX8 454 aa7.37□□□□□ -1.23
BRCA1-210ENST00000471181 LRRC8BQ6P9F7 803 aa7.37□□□□□ -1.23
BRCA1-210ENST00000471181 ADCK2Q7Z695 626 aa7.37□□□□□ -1.23
BRCA1-210ENST00000471181 SAAL1Q96ER3 474 aa7.37□□□□□ -1.23
BRCA1-210ENST00000471181 ELAC2Q9BQ52 826 aaKnown RBP7.37□□□□□ -1.23
BRCA1-210ENST00000471181 OSBPL1AQ9BXW6 950 aa7.37□□□□□ -1.23
BRCA1-210ENST00000471181 MRPL40Q9NQ50 206 aaKnown RBP7.37□□□□□ -1.23
BRCA1-210ENST00000471181 KMT5AQ9NQR1 393 aa7.37□□□□□ -1.23
BRCA1-210ENST00000471181 UTP6Q9NYH9 597 aaKnown RBP7.37□□□□□ -1.23
BRCA1-210ENST00000471181 PCDHA5Q9Y5H7 936 aa7.37□□□□□ -1.23
BRCA1-210ENST00000471181 WASLO00401 505 aaPredicted RBP7.36□□□□□ -1.23
BRCA1-210ENST00000471181 ST13P50502 369 aaKnown RBP7.36□□□□□ -1.23
BRCA1-210ENST00000471181 EPHB4P54760 987 aa7.36□□□□□ -1.23
BRCA1-210ENST00000471181 CUL1Q13616 776 aa7.36□□□□□ -1.23
BRCA1-210ENST00000471181 ZNF827Q17R98 1081 aa7.36□□□□□ -1.23
BRCA1-210ENST00000471181 MIS18BP1Q6P0N0 1132 aa7.36□□□□□ -1.23
BRCA1-210ENST00000471181 GPKOWQ92917 476 aaPredicted RBP eCLIP7.36□□□□□ -1.23
BRCA1-210ENST00000471181 TUBGCP2Q9BSJ2 902 aa7.36□□□□□ -1.23
BRCA1-210ENST00000471181 GPBP1L1Q9HC44 474 aaPredicted RBP7.36□□□□□ -1.23
BRCA1-210ENST00000471181 EXOSC4Q9NPD3 245 aaKnown RBP7.36□□□□□ -1.23
BRCA1-210ENST00000471181 TEX28O15482 410 aa7.36□□□□□ -1.23
BRCA1-210ENST00000471181 FYNP06241 537 aa7.36□□□□□ -1.23
BRCA1-210ENST00000471181 GOLGA8HP0CJ92 632 aa7.36□□□□□ -1.23
BRCA1-210ENST00000471181 SLC16A1P53985 500 aa7.36□□□□□ -1.23
BRCA1-210ENST00000471181 AP2B1P63010 937 aa7.36□□□□□ -1.23
BRCA1-210ENST00000471181 KCTD2Q14681 263 aa7.36□□□□□ -1.23
BRCA1-210ENST00000471181 OLFML2BQ68BL8 750 aa7.36□□□□□ -1.23
BRCA1-210ENST00000471181 CCDC149Q6ZUS6 474 aa7.36□□□□□ -1.23
BRCA1-210ENST00000471181 CENPUQ71F23 418 aa7.36□□□□□ -1.23
BRCA1-210ENST00000471181 FBXO11Q86XK2 927 aa7.36□□□□□ -1.23
BRCA1-210ENST00000471181 UNC45BQ8IWX7 931 aa7.36□□□□□ -1.23
BRCA1-210ENST00000471181 RAB42Q8N4Z0 105 aa7.36□□□□□ -1.23
BRCA1-210ENST00000471181 NFATC2IPQ8NCF5 419 aa7.36□□□□□ -1.23
BRCA1-210ENST00000471181 ASIC4Q96FT7 647 aa7.36□□□□□ -1.23
BRCA1-210ENST00000471181 FAM89AQ96GI7 184 aa7.36□□□□□ -1.23
BRCA1-210ENST00000471181 INTS4Q96HW7 963 aaKnown RBP7.36□□□□□ -1.23
BRCA1-210ENST00000471181 ZNF594Q96JF6 807 aaPredicted RBP7.36□□□□□ -1.23
BRCA1-210ENST00000471181 LLPHQ9BRT6 129 aaKnown RBP7.36□□□□□ -1.23
BRCA1-210ENST00000471181 MAP10Q9P2G4 905 aa7.36□□□□□ -1.23
BRCA1-210ENST00000471181 KLHL8Q9P2G9 620 aaPredicted RBP7.36□□□□□ -1.23
BRCA1-210ENST00000471181 CCNL1Q9UK58 526 aaPredicted RBP7.36□□□□□ -1.23
BRCA1-210ENST00000471181 JRKLQ9Y4A0 524 aa7.36□□□□□ -1.23
BRCA1-210ENST00000471181 CDC42BPBQ9Y5S2 1711 aa7.36□□□□□ -1.23
BRCA1-210ENST00000471181 A0A087WUV0 522 aaPredicted RBP7.36□□□□□ -1.23
BRCA1-210ENST00000471181 UBA6A0AVT1 1052 aaPredicted RBP7.36□□□□□ -1.23
BRCA1-210ENST00000471181 GOLGA8MH3BSY2 632 aa7.36□□□□□ -1.23
BRCA1-210ENST00000471181 PYGMP11217 842 aa7.36□□□□□ -1.23
BRCA1-210ENST00000471181 PPP3CCP48454 512 aa7.36□□□□□ -1.23
BRCA1-210ENST00000471181 GOLGA8FQ08AF8 430 aa7.36□□□□□ -1.23
BRCA1-210ENST00000471181 ADALQ6DHV7 355 aa7.36□□□□□ -1.23
BRCA1-210ENST00000471181 WDR75Q8IWA0 830 aaKnown RBP7.36□□□□□ -1.23
BRCA1-210ENST00000471181 AP1M1Q9BXS5 423 aa7.36□□□□□ -1.23
BRCA1-210ENST00000471181 PIDD1Q9HB75 910 aa7.36□□□□□ -1.23
BRCA1-210ENST00000471181 SAYSD1Q9NPB0 183 aa7.36□□□□□ -1.23
BRCA1-210ENST00000471181 AIPL1Q9NZN9 384 aa7.36□□□□□ -1.23
BRCA1-210ENST00000471181 NDUFB5O43674 189 aa7.36□□□□□ -1.23
BRCA1-210ENST00000471181 MTRF1O75570 445 aaKnown RBP7.36□□□□□ -1.23
BRCA1-210ENST00000471181 RALBP11234 206 aa7.36□□□□□ -1.23
BRCA1-210ENST00000471181 CSE1LP55060 971 aaKnown RBP7.36□□□□□ -1.23
BRCA1-210ENST00000471181 TIMM10P62072 90 aa7.36□□□□□ -1.23
BRCA1-210ENST00000471181 CACNB1Q02641 598 aaPredicted RBP7.36□□□□□ -1.23
BRCA1-210ENST00000471181 MKRN3Q13064 507 aaKnown RBP7.36□□□□□ -1.23
BRCA1-210ENST00000471181 NUGGCQ68CJ6 796 aa7.36□□□□□ -1.23
BRCA1-210ENST00000471181 MRPL50Q8N5N7 158 aaKnown RBP7.36□□□□□ -1.23
BRCA1-210ENST00000471181 C10orf53Q8N6V4 93 aa7.36□□□□□ -1.23
BRCA1-210ENST00000471181 AGR3Q8TD06 166 aa7.36□□□□□ -1.23
BRCA1-210ENST00000471181 ARL8AQ96BM9 186 aa7.36□□□□□ -1.23
BRCA1-210ENST00000471181 CNOT6LQ96LI5 555 aaKnown RBP7.36□□□□□ -1.23
BRCA1-210ENST00000471181 UBE2TQ9NPD8 197 aaPredicted RBP7.36□□□□□ -1.23
BRCA1-210ENST00000471181 BCS1LQ9Y276 419 aa7.36□□□□□ -1.23
BRCA1-210ENST00000471181 MEIS1O00470 390 aa7.36□□□□□ -1.23
BRCA1-210ENST00000471181 GFPT2O94808 682 aa7.36□□□□□ -1.23
BRCA1-210ENST00000471181 RAPGEF3O95398 923 aa7.36□□□□□ -1.23
BRCA1-210ENST00000471181 SOX11P35716 441 aa7.36□□□□□ -1.23
BRCA1-210ENST00000471181 NNMTP40261 264 aa7.36□□□□□ -1.23
BRCA1-210ENST00000471181 GUCY1A3Q02108 690 aa7.36□□□□□ -1.23
BRCA1-210ENST00000471181 ARHGEF6Q15052 776 aa7.36□□□□□ -1.23
BRCA1-210ENST00000471181 ANO5Q75V66 913 aa7.36□□□□□ -1.23
BRCA1-210ENST00000471181 VN1R5Q7Z5H4 357 aa7.36□□□□□ -1.23
BRCA1-210ENST00000471181 BBS2Q9BXC9 721 aa7.36□□□□□ -1.23
BRCA1-210ENST00000471181 PITPNM3Q9BZ71 974 aa7.36□□□□□ -1.23
BRCA1-210ENST00000471181 ZMYND12Q9H0C1 365 aa7.36□□□□□ -1.23
BRCA1-210ENST00000471181 DOLKQ9UPQ8 538 aa7.36□□□□□ -1.23
BRCA1-210ENST00000471181 CCDC151A5D8V7 595 aa7.35□□□□□ -1.23
BRCA1-210ENST00000471181 ASMTLO95671 621 aa7.35□□□□□ -1.23
BRCA1-210ENST00000471181 PFKFB1P16118 471 aa7.35□□□□□ -1.23
BRCA1-210ENST00000471181 MLH1P40692 756 aa7.35□□□□□ -1.23
BRCA1-210ENST00000471181 SHROOM1Q2M3G4 852 aaPredicted RBP7.35□□□□□ -1.23
BRCA1-210ENST00000471181 CCDC157Q569K6 752 aa7.35□□□□□ -1.23
BRCA1-210ENST00000471181 AKAP4Q5JQC9 854 aa7.35□□□□□ -1.23
BRCA1-210ENST00000471181 BEND6Q5SZJ8 279 aaPredicted RBP7.35□□□□□ -1.23
BRCA1-210ENST00000471181 MAP3K15Q6ZN16 1313 aa7.35□□□□□ -1.23
BRCA1-210ENST00000471181 ARHGAP27Q6ZUM4 889 aa7.35□□□□□ -1.23
BRCA1-210ENST00000471181 BLIDQ8IZY5 108 aa7.35□□□□□ -1.23
BRCA1-210ENST00000471181 NUP93Q8N1F7 819 aa7.35□□□□□ -1.23
BRCA1-210ENST00000471181 ST13P5Q8NFI4 369 aaPredicted RBP7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms