RNA–Protein interactions for RNA: ENST00000470076.1

COL7A1-208, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 651 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-208ENST00000470076 ADAMTS3O15072 1205 aa19.83■□□□□ 0.77
COL7A1-208ENST00000470076 IFNAR1P17181 557 aa19.83■□□□□ 0.77
COL7A1-208ENST00000470076 CIITAP33076 1130 aa19.83■□□□□ 0.77
COL7A1-208ENST00000470076 NAALADL2Q58DX5 795 aa19.83■□□□□ 0.77
COL7A1-208ENST00000470076 ODR4Q5SWX8 454 aa19.83■□□□□ 0.77
COL7A1-208ENST00000470076 CKAP2LQ8IYA6 745 aa19.83■□□□□ 0.77
COL7A1-208ENST00000470076 BBXQ8WY36 941 aaPredicted RBP19.83■□□□□ 0.77
COL7A1-208ENST00000470076 P2RX5Q93086 422 aa19.83■□□□□ 0.77
COL7A1-208ENST00000470076 FAM50BQ9Y247 325 aa19.83■□□□□ 0.77
COL7A1-208ENST00000470076 KIAA1671Q9BY89 1806 aa19.82■□□□□ 0.76
COL7A1-208ENST00000470076 ZBTB42B2RXF5 422 aa19.82■□□□□ 0.76
COL7A1-208ENST00000470076 RPS6KA5O75582 802 aa19.82■□□□□ 0.76
COL7A1-208ENST00000470076 MMP1P03956 469 aa19.82■□□□□ 0.76
COL7A1-208ENST00000470076 PSAPP07602 524 aa19.82■□□□□ 0.76
COL7A1-208ENST00000470076 IL9P15248 144 aa19.82■□□□□ 0.76
COL7A1-208ENST00000470076 ATP4AP20648 1035 aa19.82■□□□□ 0.76
COL7A1-208ENST00000470076 EVCP57679 992 aa19.82■□□□□ 0.76
COL7A1-208ENST00000470076 NFX1Q12986 1120 aaKnown RBP19.82■□□□□ 0.76
COL7A1-208ENST00000470076 TMEM266Q2M3C6 531 aa19.82■□□□□ 0.76
COL7A1-208ENST00000470076 PRR16Q569H4 304 aa19.82■□□□□ 0.76
COL7A1-208ENST00000470076 EP400NLQ6ZTU2 488 aa19.82■□□□□ 0.76
COL7A1-208ENST00000470076 GJD3Q8N144 294 aa19.82■□□□□ 0.76
COL7A1-208ENST00000470076 UIMC1Q96RL1 719 aa19.82■□□□□ 0.76
COL7A1-208ENST00000470076 SLC26A6Q9BXS9 759 aa19.82■□□□□ 0.76
COL7A1-208ENST00000470076 TMX1Q9H3N1 280 aa19.82■□□□□ 0.76
COL7A1-208ENST00000470076 CD320Q9NPF0 282 aa19.82■□□□□ 0.76
COL7A1-208ENST00000470076 RNF216Q9NWF9 866 aaPredicted RBP19.82■□□□□ 0.76
COL7A1-208ENST00000470076 CLDND1Q9NY35 253 aa19.82■□□□□ 0.76
COL7A1-208ENST00000470076 LRFN2Q9ULH4 789 aa19.82■□□□□ 0.76
COL7A1-208ENST00000470076 GINS2Q9Y248 185 aa19.82■□□□□ 0.76
COL7A1-208ENST00000470076 PCDHA10Q9Y5I2 948 aa19.82■□□□□ 0.76
COL7A1-208ENST00000470076 MRPL42Q9Y6G3 142 aaKnown RBP19.82■□□□□ 0.76
COL7A1-208ENST00000470076 WDR81Q562E7 1941 aa19.82■□□□□ 0.76
COL7A1-208ENST00000470076 EPB41L2O43491 1005 aaKnown RBP19.81■□□□□ 0.76
COL7A1-208ENST00000470076 PDIA3P30101 505 aaKnown RBP19.81■□□□□ 0.76
COL7A1-208ENST00000470076 SARSP49591 514 aaKnown RBP19.81■□□□□ 0.76
COL7A1-208ENST00000470076 RASGRP4Q8TDF6 673 aa19.81■□□□□ 0.76
COL7A1-208ENST00000470076 ERVK-5Q9HDB9 667 aa19.81■□□□□ 0.76
COL7A1-208ENST00000470076 SH3GLB2Q9NR46 395 aa19.81■□□□□ 0.76
COL7A1-208ENST00000470076 PLAGL2Q9UPG8 496 aa19.81■□□□□ 0.76
COL7A1-208ENST00000470076 CEP131Q9UPN4 1083 aa19.81■□□□□ 0.76
COL7A1-208ENST00000470076 NOC2LQ9Y3T9 749 aaKnown RBP19.81■□□□□ 0.76
COL7A1-208ENST00000470076 GPR182O15218 404 aa19.8■□□□□ 0.76
COL7A1-208ENST00000470076 C22orf31O95567 290 aa19.8■□□□□ 0.76
COL7A1-208ENST00000470076 CTC1Q2NKJ3 1217 aa19.8■□□□□ 0.76
COL7A1-208ENST00000470076 PAN2Q504Q3 1202 aaKnown RBP19.8■□□□□ 0.76
COL7A1-208ENST00000470076 TMEM31Q5JXX7 168 aa19.8■□□□□ 0.76
COL7A1-208ENST00000470076 KHSRPQ92945 711 aaKnown RBP eCLIP19.8■□□□□ 0.76
COL7A1-208ENST00000470076 LENG9Q96B70 501 aa19.8■□□□□ 0.76
COL7A1-208ENST00000470076 FAM167AQ96KS9 214 aa19.8■□□□□ 0.76
COL7A1-208ENST00000470076 CDHR5Q9HBB8 845 aa19.8■□□□□ 0.76
COL7A1-208ENST00000470076 ALG13Q9NP73 1137 aaKnown RBP19.8■□□□□ 0.76
COL7A1-208ENST00000470076 C1orf112Q9NSG2 853 aa19.8■□□□□ 0.76
COL7A1-208ENST00000470076 VPS54Q9P1Q0 977 aa19.8■□□□□ 0.76
COL7A1-208ENST00000470076 RAPGEFL1Q9UHV5 662 aa19.8■□□□□ 0.76
COL7A1-208ENST00000470076 SAMM50Q9Y512 469 aa19.8■□□□□ 0.76
COL7A1-208ENST00000470076 PCDHB7Q9Y5E2 793 aa19.8■□□□□ 0.76
COL7A1-208ENST00000470076 DENND3A2RUS2 1198 aa19.79■□□□□ 0.76
COL7A1-208ENST00000470076 WDR64B1ANS9 1081 aa19.79■□□□□ 0.76
COL7A1-208ENST00000470076 PI4K2BG5E9Z4 385 aa19.79■□□□□ 0.76
COL7A1-208ENST00000470076 SSTR3P32745 418 aaPredicted RBP19.79■□□□□ 0.76
COL7A1-208ENST00000470076 USP11P51784 963 aa19.79■□□□□ 0.76
COL7A1-208ENST00000470076 CRYBB1P53674 252 aaPredicted RBP19.79■□□□□ 0.76
COL7A1-208ENST00000470076 CCT2P78371 535 aaKnown RBP19.79■□□□□ 0.76
COL7A1-208ENST00000470076 HYAL1Q12794 435 aa19.79■□□□□ 0.76
COL7A1-208ENST00000470076 SLC24A5Q71RS6 500 aa19.79■□□□□ 0.76
COL7A1-208ENST00000470076 RUFY3Q7L099 469 aa19.79■□□□□ 0.76
COL7A1-208ENST00000470076 METTL13Q8N6R0 699 aa19.79■□□□□ 0.76
COL7A1-208ENST00000470076 TMEM40Q8WWA1 233 aa19.79■□□□□ 0.76
COL7A1-208ENST00000470076 PPP2R3CQ969Q6 453 aa19.79■□□□□ 0.76
COL7A1-208ENST00000470076 LRFN3Q9BTN0 628 aa19.79■□□□□ 0.76
COL7A1-208ENST00000470076 NCOA5Q9HCD5 579 aaKnown RBP19.79■□□□□ 0.76
COL7A1-208ENST00000470076 RGS18Q9NS28 235 aa19.79■□□□□ 0.76
COL7A1-208ENST00000470076 GABBR1Q9UBS5 961 aa19.79■□□□□ 0.76
COL7A1-208ENST00000470076 ST3GAL5Q9UNP4 418 aa19.79■□□□□ 0.76
COL7A1-208ENST00000470076 MAGEB2O15479 319 aa19.78■□□□□ 0.76
COL7A1-208ENST00000470076 MGEA5O60502 916 aa19.78■□□□□ 0.76
COL7A1-208ENST00000470076 GPR37L1O60883 481 aa19.78■□□□□ 0.76
COL7A1-208ENST00000470076 PPFIA3O75145 1194 aa19.78■□□□□ 0.76
COL7A1-208ENST00000470076 ITGB1P05556 798 aa19.78■□□□□ 0.76
COL7A1-208ENST00000470076 LTBRP36941 435 aa19.78■□□□□ 0.76
COL7A1-208ENST00000470076 CAMK1Q14012 370 aa19.78■□□□□ 0.76
COL7A1-208ENST00000470076 KIZQ2M2Z5 673 aa19.78■□□□□ 0.76
COL7A1-208ENST00000470076 TRIM22Q8IYM9 498 aa19.78■□□□□ 0.76
COL7A1-208ENST00000470076 RIT2Q99578 217 aa19.78■□□□□ 0.76
COL7A1-208ENST00000470076 ADAM2Q99965 735 aa19.78■□□□□ 0.76
COL7A1-208ENST00000470076 C22orf23Q9BZE7 217 aa19.78■□□□□ 0.76
COL7A1-208ENST00000470076 ZSWIM6Q9HCJ5 1215 aa19.78■□□□□ 0.76
COL7A1-208ENST00000470076 PRKAG3Q9UGI9 489 aa19.78■□□□□ 0.76
COL7A1-208ENST00000470076 FNDC1Q4ZHG4 1894 aaPredicted RBP19.77■□□□□ 0.76
COL7A1-208ENST00000470076 GATMP50440 423 aa19.77■□□□□ 0.76
COL7A1-208ENST00000470076 NLRP5P59047 1200 aa19.77■□□□□ 0.76
COL7A1-208ENST00000470076 TRMT1LQ7Z2T5 733 aaKnown RBP19.77■□□□□ 0.76
COL7A1-208ENST00000470076 ZNF710Q8N1W2 664 aa19.77■□□□□ 0.76
COL7A1-208ENST00000470076 KLHL23Q8NBE8 558 aa19.77■□□□□ 0.76
COL7A1-208ENST00000470076 SPPL3Q8TCT6 385 aa19.77■□□□□ 0.76
COL7A1-208ENST00000470076 OSMRQ99650 979 aa19.77■□□□□ 0.76
COL7A1-208ENST00000470076 DISC1Q9NRI5 854 aa19.77■□□□□ 0.76
COL7A1-208ENST00000470076 C9IYK1 514 aa19.76■□□□□ 0.75
COL7A1-208ENST00000470076 MSH4O15457 936 aa19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms