RNA–Protein interactions for RNA: ENST00000442830.5

PTPRE-203, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 5

Gene PTPRE, Length 779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-203ENST00000442830 KLRC1P26715 233 aa15.68■□□□□ 0.1
PTPRE-203ENST00000442830 METAP2P50579 478 aaKnown RBP eCLIP15.68■□□□□ 0.1
PTPRE-203ENST00000442830 IRX6P78412 446 aaPredicted RBP15.68■□□□□ 0.1
PTPRE-203ENST00000442830 HYAL1Q12794 435 aa15.68■□□□□ 0.1
PTPRE-203ENST00000442830 ITGB3BPQ13352 177 aaPredicted RBP15.68■□□□□ 0.1
PTPRE-203ENST00000442830 PDE12Q6L8Q7 609 aaKnown RBP15.68■□□□□ 0.1
PTPRE-203ENST00000442830 PLA2G4DQ86XP0 818 aa15.68■□□□□ 0.1
PTPRE-203ENST00000442830 CYP2W1Q8TAV3 490 aa15.68■□□□□ 0.1
PTPRE-203ENST00000442830 LINC01599Q8WXQ3 324 aa15.68■□□□□ 0.1
PTPRE-203ENST00000442830 BBXQ8WY36 941 aaPredicted RBP15.68■□□□□ 0.1
PTPRE-203ENST00000442830 FAM167AQ96KS9 214 aa15.68■□□□□ 0.1
PTPRE-203ENST00000442830 C11orf16Q9NQ32 467 aa15.68■□□□□ 0.1
PTPRE-203ENST00000442830 CD207Q9UJ71 328 aa15.68■□□□□ 0.1
PTPRE-203ENST00000442830 MRPL42Q9Y6G3 142 aaKnown RBP15.68■□□□□ 0.1
PTPRE-203ENST00000442830 NID2Q14112 1375 aa15.67■□□□□ 0.1
PTPRE-203ENST00000442830 DENND3A2RUS2 1198 aa15.67■□□□□ 0.1
PTPRE-203ENST00000442830 HOXA2O43364 376 aa15.67■□□□□ 0.1
PTPRE-203ENST00000442830 NDUFV1P49821 464 aa15.67■□□□□ 0.1
PTPRE-203ENST00000442830 AKAP17AQ02040 695 aaKnown RBP15.67■□□□□ 0.1
PTPRE-203ENST00000442830 NFX1Q12986 1120 aaKnown RBP15.67■□□□□ 0.1
PTPRE-203ENST00000442830 TYW1BQ6NUM6 668 aa15.67■□□□□ 0.1
PTPRE-203ENST00000442830 SLC24A5Q71RS6 500 aa15.67■□□□□ 0.1
PTPRE-203ENST00000442830 REXO1Q8N1G1 1221 aaKnown RBP15.67■□□□□ 0.1
PTPRE-203ENST00000442830 CCDC148Q8NFR7 591 aa15.67■□□□□ 0.1
PTPRE-203ENST00000442830 KHSRPQ92945 711 aaKnown RBP eCLIP15.67■□□□□ 0.1
PTPRE-203ENST00000442830 ZNF577Q9BSK1 485 aa15.67■□□□□ 0.1
PTPRE-203ENST00000442830 ZMYND12Q9H0C1 365 aa15.67■□□□□ 0.1
PTPRE-203ENST00000442830 FAM86C2PA6NEL3 165 aa15.66■□□□□ 0.1
PTPRE-203ENST00000442830 MAGEB2O15479 319 aa15.66■□□□□ 0.1
PTPRE-203ENST00000442830 MBTPS2O43462 519 aa15.66■□□□□ 0.1
PTPRE-203ENST00000442830 PSAPP07602 524 aa15.66■□□□□ 0.1
PTPRE-203ENST00000442830 SRGAP2BP0DMP2 458 aa15.66■□□□□ 0.1
PTPRE-203ENST00000442830 TMOD1P28289 359 aa15.66■□□□□ 0.1
PTPRE-203ENST00000442830 LTBRP36941 435 aa15.66■□□□□ 0.1
PTPRE-203ENST00000442830 CRYBB1P53674 252 aaPredicted RBP15.66■□□□□ 0.1
PTPRE-203ENST00000442830 TMEM62Q0P6H9 643 aa15.66■□□□□ 0.1
PTPRE-203ENST00000442830 ADAM15Q13444 863 aa15.66■□□□□ 0.1
PTPRE-203ENST00000442830 RTN4RL1Q86UN2 441 aaPredicted RBP15.66■□□□□ 0.1
PTPRE-203ENST00000442830 CKAP2LQ8IYA6 745 aa15.66■□□□□ 0.1
PTPRE-203ENST00000442830 FBXL16Q8N461 479 aa15.66■□□□□ 0.1
PTPRE-203ENST00000442830 EFHBQ8N7U6 833 aa15.66■□□□□ 0.1
PTPRE-203ENST00000442830 SPPL3Q8TCT6 385 aa15.66■□□□□ 0.1
PTPRE-203ENST00000442830 TRAPPC12Q8WVT3 735 aa15.66■□□□□ 0.1
PTPRE-203ENST00000442830 RSPH1Q8WYR4 309 aa15.66■□□□□ 0.1
PTPRE-203ENST00000442830 PGBD1Q96JS3 809 aa15.66■□□□□ 0.1
PTPRE-203ENST00000442830 CDCA3Q99618 268 aaPredicted RBP15.66■□□□□ 0.1
PTPRE-203ENST00000442830 ELAC1Q9H777 363 aaKnown RBP15.66■□□□□ 0.1
PTPRE-203ENST00000442830 ERVK-5Q9HDB9 667 aa15.66■□□□□ 0.1
PTPRE-203ENST00000442830 RGS18Q9NS28 235 aa15.66■□□□□ 0.1
PTPRE-203ENST00000442830 BRPF3Q9ULD4 1205 aa15.66■□□□□ 0.1
PTPRE-203ENST00000442830 NAP1L2Q9ULW6 460 aaPredicted RBP15.66■□□□□ 0.1
PTPRE-203ENST00000442830 PLXNA4Q9HCM2 1894 aa15.65■□□□□ 0.1
PTPRE-203ENST00000442830 IGLV3-22A0A075B6J6 115 aa15.65■□□□□ 0.1
PTPRE-203ENST00000442830 EYA4O95677 639 aa15.65■□□□□ 0.1
PTPRE-203ENST00000442830 CCNE2O96020 404 aa15.65■□□□□ 0.1
PTPRE-203ENST00000442830 ITGB1P05556 798 aa15.65■□□□□ 0.1
PTPRE-203ENST00000442830 SPOUT1Q5T280 376 aaKnown RBP15.65■□□□□ 0.1
PTPRE-203ENST00000442830 CCDC60Q8IWA6 550 aaPredicted RBP15.65■□□□□ 0.1
PTPRE-203ENST00000442830 KIAA0319LQ8IZA0 1049 aa15.65■□□□□ 0.1
PTPRE-203ENST00000442830 KLHL23Q8NBE8 558 aa15.65■□□□□ 0.1
PTPRE-203ENST00000442830 POF1BQ8WVV4 589 aa15.65■□□□□ 0.1
PTPRE-203ENST00000442830 CRYGNQ8WXF5 182 aa15.65■□□□□ 0.1
PTPRE-203ENST00000442830 MAP7D2Q96T17 732 aa15.65■□□□□ 0.1
PTPRE-203ENST00000442830 C22orf23Q9BZE7 217 aa15.65■□□□□ 0.1
PTPRE-203ENST00000442830 ALG13Q9NP73 1137 aaKnown RBP15.65■□□□□ 0.1
PTPRE-203ENST00000442830 PCDHA10Q9Y5I2 948 aa15.65■□□□□ 0.1
PTPRE-203ENST00000442830 MAFBQ9Y5Q3 323 aaPredicted RBP15.65■□□□□ 0.1
PTPRE-203ENST00000442830 CARNS1A5YM72 827 aa15.64■□□□□ 0.09
PTPRE-203ENST00000442830 FAM86B1E9PN63 330 aa15.64■□□□□ 0.09
PTPRE-203ENST00000442830 DDX39AO00148 427 aaKnown RBP15.64■□□□□ 0.09
PTPRE-203ENST00000442830 PRPF3O43395 683 aaKnown RBP15.64■□□□□ 0.09
PTPRE-203ENST00000442830 TBX10O75333 385 aa15.64■□□□□ 0.09
PTPRE-203ENST00000442830 FAM86B2P0C5J1 330 aa15.64■□□□□ 0.09
PTPRE-203ENST00000442830 LAG3P18627 525 aa15.64■□□□□ 0.09
PTPRE-203ENST00000442830 CDC27P30260 824 aa15.64■□□□□ 0.09
PTPRE-203ENST00000442830 CIITAP33076 1130 aa15.64■□□□□ 0.09
PTPRE-203ENST00000442830 COASYQ13057 564 aa15.64■□□□□ 0.09
PTPRE-203ENST00000442830 COL9A3Q14050 684 aaPredicted RBP15.64■□□□□ 0.09
PTPRE-203ENST00000442830 PAN2Q504Q3 1202 aaKnown RBP15.64■□□□□ 0.09
PTPRE-203ENST00000442830 HERC4Q5GLZ8 1057 aaPredicted RBP15.64■□□□□ 0.09
PTPRE-203ENST00000442830 JAKMIP3Q5VZ66 844 aa15.64■□□□□ 0.09
PTPRE-203ENST00000442830 SWSAP1Q6NVH7 229 aa15.64■□□□□ 0.09
PTPRE-203ENST00000442830 BLOC1S2Q6QNY1 142 aa15.64■□□□□ 0.09
PTPRE-203ENST00000442830 ADAM2Q99965 735 aa15.64■□□□□ 0.09
PTPRE-203ENST00000442830 IGFLR1Q9H665 355 aa15.64■□□□□ 0.09
PTPRE-203ENST00000442830 ATP6V0A4Q9HBG4 840 aa15.64■□□□□ 0.09
PTPRE-203ENST00000442830 FAM217BQ9NTX9 383 aaPredicted RBP15.64■□□□□ 0.09
PTPRE-203ENST00000442830 TMEM161AQ9NX61 479 aa15.64■□□□□ 0.09
PTPRE-203ENST00000442830 TMEM260Q9NX78 707 aa15.64■□□□□ 0.09
PTPRE-203ENST00000442830 ST3GAL5Q9UNP4 418 aa15.64■□□□□ 0.09
PTPRE-203ENST00000442830 GINS2Q9Y248 185 aa15.64■□□□□ 0.09
PTPRE-203ENST00000442830 LZTS1Q9Y250 596 aa15.64■□□□□ 0.09
PTPRE-203ENST00000442830 WDR64B1ANS9 1081 aa15.63■□□□□ 0.09
PTPRE-203ENST00000442830 C9IYK1 514 aa15.63■□□□□ 0.09
PTPRE-203ENST00000442830 DHX15O43143 795 aaKnown RBP15.63■□□□□ 0.09
PTPRE-203ENST00000442830 C22orf31O95567 290 aa15.63■□□□□ 0.09
PTPRE-203ENST00000442830 PSMA5P28066 241 aa15.63■□□□□ 0.09
PTPRE-203ENST00000442830 PPM1AP35813 382 aa15.63■□□□□ 0.09
PTPRE-203ENST00000442830 CDC42EP1Q00587 391 aa15.63■□□□□ 0.09
PTPRE-203ENST00000442830 PKN1Q16512 942 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms