RNA–Protein interactions for RNA: ENST00000424225.1

TOP2B-203, Transcript of DNA topoisomerase II beta, humanhuman

TSL 1 (best)

Gene TOP2B, Length 3,525 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2B-203ENST00000424225 AK8Q96MA6 479 aa14.07□□□□□ -0.16
TOP2B-203ENST00000424225 SYT11Q9BT88 431 aa14.07□□□□□ -0.16
TOP2B-203ENST00000424225 CUEDC2Q9H467 287 aa14.07□□□□□ -0.16
TOP2B-203ENST00000424225 ACTR5Q9H9F9 607 aaPredicted RBP14.07□□□□□ -0.16
TOP2B-203ENST00000424225 RNF14Q9UBS8 474 aa14.07□□□□□ -0.16
TOP2B-203ENST00000424225 BAIAP2L1Q9UHR4 511 aa14.07□□□□□ -0.16
TOP2B-203ENST00000424225 DBR1Q9UK59 544 aaKnown RBP14.07□□□□□ -0.16
TOP2B-203ENST00000424225 ABCB11O95342 1321 aa14.07□□□□□ -0.16
TOP2B-203ENST00000424225 SMIM23A6NLE4 172 aa14.07□□□□□ -0.16
TOP2B-203ENST00000424225 USP17L5A8MUK1 530 aa14.07□□□□□ -0.16
TOP2B-203ENST00000424225 TRAF5O00463 557 aa14.07□□□□□ -0.16
TOP2B-203ENST00000424225 CTNND1O60716 968 aaKnown RBP14.07□□□□□ -0.16
TOP2B-203ENST00000424225 USP8P40818 1118 aa14.07□□□□□ -0.16
TOP2B-203ENST00000424225 KLHL30Q0D2K2 578 aa14.07□□□□□ -0.16
TOP2B-203ENST00000424225 RPS6KA1Q15418 735 aa14.07□□□□□ -0.16
TOP2B-203ENST00000424225 PPP1R7Q15435 360 aa14.07□□□□□ -0.16
TOP2B-203ENST00000424225 NEK8Q86SG6 692 aa14.07□□□□□ -0.16
TOP2B-203ENST00000424225 SLC30A5Q8TAD4 765 aa14.07□□□□□ -0.16
TOP2B-203ENST00000424225 C18orf8Q96DM3 657 aa14.07□□□□□ -0.16
TOP2B-203ENST00000424225 ELAC2Q9BQ52 826 aaKnown RBP14.07□□□□□ -0.16
TOP2B-203ENST00000424225 AZI2Q9H6S1 392 aa14.07□□□□□ -0.16
TOP2B-203ENST00000424225 SLC5A4Q9NY91 659 aa14.07□□□□□ -0.16
TOP2B-203ENST00000424225 SAP30BPQ9UHR5 308 aaKnown RBP14.07□□□□□ -0.16
TOP2B-203ENST00000424225 SMCHD1A6NHR9 2005 aa14.07□□□□□ -0.16
TOP2B-203ENST00000424225 AFF2P51816 1311 aa14.07□□□□□ -0.16
TOP2B-203ENST00000424225 KRIT1O00522 736 aa14.07□□□□□ -0.16
TOP2B-203ENST00000424225 NF2P35240 595 aa14.07□□□□□ -0.16
TOP2B-203ENST00000424225 IL6STP40189 918 aaPredicted RBP14.07□□□□□ -0.16
TOP2B-203ENST00000424225 SLCO1A2P46721 670 aa14.07□□□□□ -0.16
TOP2B-203ENST00000424225 LRRC63Q05C16 580 aa14.07□□□□□ -0.16
TOP2B-203ENST00000424225 SLC29A2Q14542 456 aa14.07□□□□□ -0.16
TOP2B-203ENST00000424225 PLS1Q14651 629 aa14.07□□□□□ -0.16
TOP2B-203ENST00000424225 KRT71Q3SY84 523 aa14.07□□□□□ -0.16
TOP2B-203ENST00000424225 RMDN2Q96LZ7 410 aa14.07□□□□□ -0.16
TOP2B-203ENST00000424225 MLXIPLQ9NP71 852 aa14.07□□□□□ -0.16
TOP2B-203ENST00000424225 PVALEFA0A1B0GWK0 134 aa14.06□□□□□ -0.16
TOP2B-203ENST00000424225 BTNL10A8MVZ5 291 aa14.06□□□□□ -0.16
TOP2B-203ENST00000424225 BUB1BO60566 1050 aaPredicted RBP14.06□□□□□ -0.16
TOP2B-203ENST00000424225 CLTAP09496 248 aa14.06□□□□□ -0.16
TOP2B-203ENST00000424225 LINGO3P0C6S8 592 aa14.06□□□□□ -0.16
TOP2B-203ENST00000424225 UCHL3P15374 230 aa14.06□□□□□ -0.16
TOP2B-203ENST00000424225 STAT3P40763 770 aa14.06□□□□□ -0.16
TOP2B-203ENST00000424225 PTGIRP43119 386 aa14.06□□□□□ -0.16
TOP2B-203ENST00000424225 MARSP56192 900 aaKnown RBP14.06□□□□□ -0.16
TOP2B-203ENST00000424225 LRRC14Q15048 493 aa14.06□□□□□ -0.16
TOP2B-203ENST00000424225 SEPT14Q6ZU15 432 aa14.06□□□□□ -0.16
TOP2B-203ENST00000424225 AMIGO3Q86WK7 504 aa14.06□□□□□ -0.16
TOP2B-203ENST00000424225 SPIRE2Q8WWL2 714 aa14.06□□□□□ -0.16
TOP2B-203ENST00000424225 TCP11L1Q9NUJ3 509 aa14.06□□□□□ -0.16
TOP2B-203ENST00000424225 CTNNAL1Q9UBT7 734 aa14.06□□□□□ -0.16
TOP2B-203ENST00000424225 CRYMQ14894 314 aa14.06□□□□□ -0.16
TOP2B-203ENST00000424225 MICALCLQ6ZW33 695 aa14.06□□□□□ -0.16
TOP2B-203ENST00000424225 DGKHQ86XP1 1220 aa14.06□□□□□ -0.16
TOP2B-203ENST00000424225 LMBR1Q8WVP7 490 aa14.06□□□□□ -0.16
TOP2B-203ENST00000424225 ACSBG1Q96GR2 724 aa14.06□□□□□ -0.16
TOP2B-203ENST00000424225 C15orf41Q9Y2V0 281 aa14.06□□□□□ -0.16
TOP2B-203ENST00000424225 A6NNZ2 444 aa14.06□□□□□ -0.16
TOP2B-203ENST00000424225 LAD1O00515 517 aa14.06□□□□□ -0.16
TOP2B-203ENST00000424225 FGGP02679 453 aa14.06□□□□□ -0.16
TOP2B-203ENST00000424225 MMEP08473 750 aa14.06□□□□□ -0.16
TOP2B-203ENST00000424225 CETPP11597 493 aa14.06□□□□□ -0.16
TOP2B-203ENST00000424225 TAL1P17542 331 aaPredicted RBP14.06□□□□□ -0.16
TOP2B-203ENST00000424225 IFNAR2P48551 515 aa14.06□□□□□ -0.16
TOP2B-203ENST00000424225 FXR2P51116 673 aaKnown RBP eCLIP14.06□□□□□ -0.169e-8■■■□□ 15.8
TOP2B-203ENST00000424225 BIRC3Q13489 604 aa14.06□□□□□ -0.16
TOP2B-203ENST00000424225 CUL1Q13616 776 aa14.06□□□□□ -0.16
TOP2B-203ENST00000424225 TUBB8Q3ZCM7 444 aa14.06□□□□□ -0.16
TOP2B-203ENST00000424225 FITM2Q8N6M3 262 aa14.06□□□□□ -0.16
TOP2B-203ENST00000424225 KIF9Q9HAQ2 790 aa14.06□□□□□ -0.16
TOP2B-203ENST00000424225 FRMPD2Q68DX3 1309 aaPredicted RBP14.05□□□□□ -0.16
TOP2B-203ENST00000424225 AKAP3O75969 853 aa14.05□□□□□ -0.16
TOP2B-203ENST00000424225 GHRP10912 638 aa14.05□□□□□ -0.16
TOP2B-203ENST00000424225 CRKLP46109 303 aaKnown RBP14.05□□□□□ -0.16
TOP2B-203ENST00000424225 CLNS1AP54105 237 aaKnown RBP14.05□□□□□ -0.16
TOP2B-203ENST00000424225 NAPAP54920 295 aa14.05□□□□□ -0.16
TOP2B-203ENST00000424225 PPATQ06203 517 aa14.05□□□□□ -0.16
TOP2B-203ENST00000424225 ZNF268Q14587 947 aaPredicted RBP14.05□□□□□ -0.16
TOP2B-203ENST00000424225 KRT35Q92764 455 aa14.05□□□□□ -0.16
TOP2B-203ENST00000424225 AAASQ9NRG9 546 aa14.05□□□□□ -0.16
TOP2B-203ENST00000424225 CES2O00748 559 aa14.05□□□□□ -0.16
TOP2B-203ENST00000424225 KIAA0391O15091 583 aaKnown RBP14.05□□□□□ -0.16
TOP2B-203ENST00000424225 SMNDC1O75940 238 aaKnown RBP eCLIP14.05□□□□□ -0.16
TOP2B-203ENST00000424225 NONOQ15233 471 aaKnown RBP eCLIP14.05□□□□□ -0.162e-7■■■□□ 16
TOP2B-203ENST00000424225 SLC17A8Q8NDX2 589 aa14.05□□□□□ -0.16
TOP2B-203ENST00000424225 TMOD4Q9NZQ9 345 aa14.05□□□□□ -0.16
TOP2B-203ENST00000424225 STX8Q9UNK0 236 aa14.05□□□□□ -0.16
TOP2B-203ENST00000424225 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.05□□□□□ -0.16
TOP2B-203ENST00000424225 NIP7Q9Y221 180 aaKnown RBP eCLIP14.05□□□□□ -0.16
TOP2B-203ENST00000424225 CD2APQ9Y5K6 639 aa14.05□□□□□ -0.16
TOP2B-203ENST00000424225 CHRNB2P17787 502 aa14.04□□□□□ -0.16
TOP2B-203ENST00000424225 FGFR4P22455 802 aa14.04□□□□□ -0.16
TOP2B-203ENST00000424225 RPL21P46778 160 aaKnown RBP14.04□□□□□ -0.16
TOP2B-203ENST00000424225 EPHA7Q15375 998 aa14.04□□□□□ -0.16
TOP2B-203ENST00000424225 ALKBH5Q6P6C2 394 aaKnown RBP14.04□□□□□ -0.16
TOP2B-203ENST00000424225 ASRGL1Q7L266 308 aa14.04□□□□□ -0.16
TOP2B-203ENST00000424225 EIF1ADQ8N9N8 165 aaKnown RBP14.04□□□□□ -0.16
TOP2B-203ENST00000424225 PHC3Q8NDX5 983 aa14.04□□□□□ -0.16
TOP2B-203ENST00000424225 PWWP2AQ96N64 755 aa14.04□□□□□ -0.16
TOP2B-203ENST00000424225 DDX23Q9BUQ8 820 aaKnown RBP14.04□□□□□ -0.16
TOP2B-203ENST00000424225 MXD3Q9BW11 206 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms