RNA–Protein interactions for RNA: ENST00000417101.1

ACTB-203, Transcript of actin beta, humanhuman

TSL 4

Gene ACTB, Length 472 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-203ENST00000417101 LMAN2LQ9H0V9 348 aa24.72■■□□□ 1.55
ACTB-203ENST00000417101 TMX1Q9H3N1 280 aa24.72■■□□□ 1.55
ACTB-203ENST00000417101 CDHR5Q9HBB8 845 aa24.72■■□□□ 1.55
ACTB-203ENST00000417101 VPS54Q9P1Q0 977 aa24.72■■□□□ 1.55
ACTB-203ENST00000417101 TCEAL9Q9UHQ7 104 aa24.72■■□□□ 1.55
ACTB-203ENST00000417101 MRPL42Q9Y6G3 142 aaKnown RBP24.72■■□□□ 1.55
ACTB-203ENST00000417101 ZBTB42B2RXF5 422 aa24.71■■□□□ 1.55
ACTB-203ENST00000417101 STAG3L1P0CL83 205 aa24.71■■□□□ 1.55
ACTB-203ENST00000417101 IL9P15248 144 aa24.71■■□□□ 1.55
ACTB-203ENST00000417101 IFNAR1P17181 557 aa24.71■■□□□ 1.55
ACTB-203ENST00000417101 IBSPP21815 317 aaPredicted RBP24.71■■□□□ 1.55
ACTB-203ENST00000417101 PDIA3P30101 505 aaKnown RBP24.71■■□□□ 1.55
ACTB-203ENST00000417101 PAN2Q504Q3 1202 aaKnown RBP24.71■■□□□ 1.55
ACTB-203ENST00000417101 FAM178BQ8IXR5 827 aa24.71■■□□□ 1.55
ACTB-203ENST00000417101 CMTR2Q8IYT2 770 aaKnown RBP24.71■■□□□ 1.55
ACTB-203ENST00000417101 CCDC148Q8NFR7 591 aa24.71■■□□□ 1.55
ACTB-203ENST00000417101 NOC2LQ9Y3T9 749 aaKnown RBP24.71■■□□□ 1.55
ACTB-203ENST00000417101 MAFBQ9Y5Q3 323 aaPredicted RBP24.71■■□□□ 1.55
ACTB-203ENST00000417101 GRXCR2A6NFK2 248 aa24.7■■□□□ 1.54
ACTB-203ENST00000417101 RPS6KA5O75582 802 aa24.7■■□□□ 1.54
ACTB-203ENST00000417101 CSPG5O95196 566 aa24.7■■□□□ 1.54
ACTB-203ENST00000417101 CIITAP33076 1130 aa24.7■■□□□ 1.54
ACTB-203ENST00000417101 COL19A1Q14993 1142 aa24.7■■□□□ 1.54
ACTB-203ENST00000417101 SMAP1Q8IYB5 467 aaPredicted RBP24.7■■□□□ 1.54
ACTB-203ENST00000417101 PLVAPQ9BX97 442 aa24.7■■□□□ 1.54
ACTB-203ENST00000417101 ERVK-5Q9HDB9 667 aa24.7■■□□□ 1.54
ACTB-203ENST00000417101 ALG13Q9NP73 1137 aaKnown RBP24.7■■□□□ 1.54
ACTB-203ENST00000417101 CLDND1Q9NY35 253 aa24.7■■□□□ 1.54
ACTB-203ENST00000417101 LRFN2Q9ULH4 789 aa24.7■■□□□ 1.54
ACTB-203ENST00000417101 PCDHA10Q9Y5I2 948 aa24.7■■□□□ 1.54
ACTB-203ENST00000417101 C22orf31O95567 290 aa24.69■■□□□ 1.54
ACTB-203ENST00000417101 PSAPP07602 524 aa24.69■■□□□ 1.54
ACTB-203ENST00000417101 GATMP50440 423 aa24.69■■□□□ 1.54
ACTB-203ENST00000417101 EVCP57679 992 aa24.69■■□□□ 1.54
ACTB-203ENST00000417101 PUS10Q3MIT2 529 aaKnown RBP24.69■■□□□ 1.54
ACTB-203ENST00000417101 TMEM40Q8WWA1 233 aa24.69■■□□□ 1.54
ACTB-203ENST00000417101 BBXQ8WY36 941 aaPredicted RBP24.69■■□□□ 1.54
ACTB-203ENST00000417101 LENG9Q96B70 501 aa24.69■■□□□ 1.54
ACTB-203ENST00000417101 PPP1R16BQ96T49 567 aa24.69■■□□□ 1.54
ACTB-203ENST00000417101 GABBR1Q9UBS5 961 aa24.69■■□□□ 1.54
ACTB-203ENST00000417101 LOXHD1Q8IVV2 1947 aa24.69■■□□□ 1.54
ACTB-203ENST00000417101 MGEA5O60502 916 aa24.68■■□□□ 1.54
ACTB-203ENST00000417101 KIZQ2M2Z5 673 aa24.68■■□□□ 1.54
ACTB-203ENST00000417101 RUFY3Q7L099 469 aa24.68■■□□□ 1.54
ACTB-203ENST00000417101 GJD3Q8N144 294 aa24.68■■□□□ 1.54
ACTB-203ENST00000417101 METTL13Q8N6R0 699 aa24.68■■□□□ 1.54
ACTB-203ENST00000417101 ST3GAL5Q9UNP4 418 aa24.68■■□□□ 1.54
ACTB-203ENST00000417101 PLAGL2Q9UPG8 496 aa24.68■■□□□ 1.54
ACTB-203ENST00000417101 SAMM50Q9Y512 469 aa24.68■■□□□ 1.54
ACTB-203ENST00000417101 NCK2O43639 380 aa24.67■■□□□ 1.54
ACTB-203ENST00000417101 MMP1P03956 469 aa24.67■■□□□ 1.54
ACTB-203ENST00000417101 SARSP49591 514 aaKnown RBP24.67■■□□□ 1.54
ACTB-203ENST00000417101 NLRP5P59047 1200 aa24.67■■□□□ 1.54
ACTB-203ENST00000417101 HYAL1Q12794 435 aa24.67■■□□□ 1.54
ACTB-203ENST00000417101 TOB2Q14106 344 aaPredicted RBP24.67■■□□□ 1.54
ACTB-203ENST00000417101 P2RX5Q93086 422 aa24.67■■□□□ 1.54
ACTB-203ENST00000417101 ADAM2Q99965 735 aa24.67■■□□□ 1.54
ACTB-203ENST00000417101 ZSWIM6Q9HCJ5 1215 aa24.67■■□□□ 1.54
ACTB-203ENST00000417101 DENND3A2RUS2 1198 aa24.66■■□□□ 1.54
ACTB-203ENST00000417101 WDR64B1ANS9 1081 aa24.66■■□□□ 1.54
ACTB-203ENST00000417101 EDIL3O43854 480 aa24.66■■□□□ 1.54
ACTB-203ENST00000417101 VTNP04004 478 aa24.66■■□□□ 1.54
ACTB-203ENST00000417101 SSTR3P32745 418 aaPredicted RBP24.66■■□□□ 1.54
ACTB-203ENST00000417101 CRYBB1P53674 252 aaPredicted RBP24.66■■□□□ 1.54
ACTB-203ENST00000417101 ODR4Q5SWX8 454 aa24.66■■□□□ 1.54
ACTB-203ENST00000417101 OSMRQ99650 979 aa24.66■■□□□ 1.54
ACTB-203ENST00000417101 SH3GLB2Q9NR46 395 aa24.66■■□□□ 1.54
ACTB-203ENST00000417101 PCDHB7Q9Y5E2 793 aa24.66■■□□□ 1.54
ACTB-203ENST00000417101 GPR182O15218 404 aa24.65■■□□□ 1.54
ACTB-203ENST00000417101 MSH4O15457 936 aa24.65■■□□□ 1.54
ACTB-203ENST00000417101 ITGB1P05556 798 aa24.65■■□□□ 1.54
ACTB-203ENST00000417101 LTBRP36941 435 aa24.65■■□□□ 1.54
ACTB-203ENST00000417101 CAMK1Q14012 370 aa24.65■■□□□ 1.54
ACTB-203ENST00000417101 CTC1Q2NKJ3 1217 aa24.65■■□□□ 1.54
ACTB-203ENST00000417101 NAALADL2Q58DX5 795 aa24.65■■□□□ 1.54
ACTB-203ENST00000417101 TRIM22Q8IYM9 498 aa24.65■■□□□ 1.54
ACTB-203ENST00000417101 KLHL23Q8NBE8 558 aa24.65■■□□□ 1.54
ACTB-203ENST00000417101 FAM167AQ96KS9 214 aa24.65■■□□□ 1.54
ACTB-203ENST00000417101 LRFN3Q9BTN0 628 aa24.65■■□□□ 1.54
ACTB-203ENST00000417101 DISC1Q9NRI5 854 aa24.65■■□□□ 1.54
ACTB-203ENST00000417101 RGS18Q9NS28 235 aa24.65■■□□□ 1.54
ACTB-203ENST00000417101 CEP131Q9UPN4 1083 aa24.65■■□□□ 1.54
ACTB-203ENST00000417101 CYP46A1Q9Y6A2 500 aa24.65■■□□□ 1.54
ACTB-203ENST00000417101 EVPLQ92817 2033 aa24.64■■□□□ 1.54
ACTB-203ENST00000417101 DNAJB1P25685 340 aa24.64■■□□□ 1.54
ACTB-203ENST00000417101 GTF2F1P35269 517 aaKnown RBP eCLIP24.64■■□□□ 1.545e-13■□□□□ 10.8
ACTB-203ENST00000417101 USP11P51784 963 aa24.64■■□□□ 1.54
ACTB-203ENST00000417101 CLCN3P51790 818 aa24.64■■□□□ 1.54
ACTB-203ENST00000417101 SSRP1Q08945 709 aaKnown RBP24.64■■□□□ 1.54
ACTB-203ENST00000417101 TMEM31Q5JXX7 168 aa24.64■■□□□ 1.54
ACTB-203ENST00000417101 FAM43BQ6ZT52 329 aaPredicted RBP24.64■■□□□ 1.54
ACTB-203ENST00000417101 SLC24A5Q71RS6 500 aa24.64■■□□□ 1.54
ACTB-203ENST00000417101 FAM228AQ86W67 206 aa24.64■■□□□ 1.54
ACTB-203ENST00000417101 SPPL3Q8TCT6 385 aa24.64■■□□□ 1.54
ACTB-203ENST00000417101 LARP6Q9BRS8 491 aaKnown RBP24.64■■□□□ 1.54
ACTB-203ENST00000417101 IGFLR1Q9H665 355 aa24.64■■□□□ 1.54
ACTB-203ENST00000417101 C1orf112Q9NSG2 853 aa24.64■■□□□ 1.54
ACTB-203ENST00000417101 FAM50BQ9Y247 325 aa24.64■■□□□ 1.54
ACTB-203ENST00000417101 PI4K2BG5E9Z4 385 aa24.63■■□□□ 1.53
ACTB-203ENST00000417101 MAGEB2O15479 319 aa24.63■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms