RNA–Protein interactions for RNA: ENST00000401874.6

TSC2-204, Transcript of TSC complex subunit 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TSC2, Length 5,421 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-204ENST00000401874 GOLGA8CPA6NN73 597 aa17.97■□□□□ 0.47
TSC2-204ENST00000401874 STX1BP61266 288 aa17.97■□□□□ 0.47
TSC2-204ENST00000401874 TRIM56Q9BRZ2 755 aaKnown RBP17.97■□□□□ 0.47
TSC2-204ENST00000401874 FGFR1OP2Q9NVK5 253 aa17.97■□□□□ 0.47
TSC2-204ENST00000401874 NOP53Q9NZM5 478 aaKnown RBP17.97■□□□□ 0.47
TSC2-204ENST00000401874 MID2Q9UJV3 735 aa17.97■□□□□ 0.47
TSC2-204ENST00000401874 FOXN1O15353 648 aa17.96■□□□□ 0.47
TSC2-204ENST00000401874 ORC4O43929 436 aa17.96■□□□□ 0.47
TSC2-204ENST00000401874 PRPSAP2O60256 369 aa17.96■□□□□ 0.47
TSC2-204ENST00000401874 ATP5HO75947 161 aa17.96■□□□□ 0.47
TSC2-204ENST00000401874 HOXA13P31271 388 aaPredicted RBP17.96■□□□□ 0.47
TSC2-204ENST00000401874 PPP2R2AP63151 447 aa17.96■□□□□ 0.47
TSC2-204ENST00000401874 IGBP1P78318 339 aa17.96■□□□□ 0.47
TSC2-204ENST00000401874 BBS9Q3SYG4 887 aa17.96■□□□□ 0.47
TSC2-204ENST00000401874 SESTD1Q86VW0 696 aa17.96■□□□□ 0.47
TSC2-204ENST00000401874 GSPT2Q8IYD1 628 aaKnown RBP17.96■□□□□ 0.47
TSC2-204ENST00000401874 RBM41Q96IZ5 413 aaKnown RBP17.96■□□□□ 0.47
TSC2-204ENST00000401874 TAF1DQ9H5J8 278 aaPredicted RBP17.96■□□□□ 0.47
TSC2-204ENST00000401874 DBNDD1Q9H9R9 158 aa17.96■□□□□ 0.47
TSC2-204ENST00000401874 KNOP1Q1ED39 458 aaKnown RBP17.96■□□□□ 0.47
TSC2-204ENST00000401874 E4F1Q66K89 784 aaPredicted RBP17.96■□□□□ 0.47
TSC2-204ENST00000401874 COG1Q8WTW3 980 aa17.96■□□□□ 0.47
TSC2-204ENST00000401874 HDAC11Q96DB2 347 aa17.96■□□□□ 0.47
TSC2-204ENST00000401874 WDR24Q96S15 920 aa17.96■□□□□ 0.47
TSC2-204ENST00000401874 PITPNM3Q9BZ71 974 aa17.96■□□□□ 0.47
TSC2-204ENST00000401874 ITIH6Q6UXX5 1313 aa17.96■□□□□ 0.47
TSC2-204ENST00000401874 SYNJ2BP-COX16A0A087WUM0 186 aa17.96■□□□□ 0.47
TSC2-204ENST00000401874 LMNAP02545 664 aaKnown RBP17.96■□□□□ 0.47
TSC2-204ENST00000401874 ESRRAP11474 423 aaPredicted RBP17.96■□□□□ 0.47
TSC2-204ENST00000401874 JAK3P52333 1124 aa17.96■□□□□ 0.47
TSC2-204ENST00000401874 TBC1D1Q86TI0 1168 aaPredicted RBP17.96■□□□□ 0.47
TSC2-204ENST00000401874 COX16Q9P0S2 106 aa17.96■□□□□ 0.47
TSC2-204ENST00000401874 GMNCA6NCL1 334 aa17.96■□□□□ 0.46
TSC2-204ENST00000401874 OATP04181 439 aa17.96■□□□□ 0.46
TSC2-204ENST00000401874 PMS2P54278 862 aa17.96■□□□□ 0.46
TSC2-204ENST00000401874 KCTD2Q14681 263 aa17.96■□□□□ 0.46
TSC2-204ENST00000401874 RAB44Q7Z6P3 723 aaPredicted RBP17.96■□□□□ 0.46
TSC2-204ENST00000401874 SLITRK6Q9H5Y7 841 aa17.96■□□□□ 0.46
TSC2-204ENST00000401874 SLC38A10Q9HBR0 1119 aa17.96■□□□□ 0.46
TSC2-204ENST00000401874 HDAC6Q9UBN7 1215 aa17.96■□□□□ 0.46
TSC2-204ENST00000401874 MINPP1Q9UNW1 487 aa17.96■□□□□ 0.46
TSC2-204ENST00000401874 POLR1AO95602 1720 aaPredicted RBP17.95■□□□□ 0.46
TSC2-204ENST00000401874 CHUKO15111 745 aa17.95■□□□□ 0.46
TSC2-204ENST00000401874 TTI1O43156 1089 aa17.95■□□□□ 0.46
TSC2-204ENST00000401874 LDHAP00338 332 aaKnown RBP17.95■□□□□ 0.46
TSC2-204ENST00000401874 PRELPP51888 382 aa17.95■□□□□ 0.46
TSC2-204ENST00000401874 SATB1Q01826 763 aa17.95■□□□□ 0.46
TSC2-204ENST00000401874 MORC4Q8TE76 937 aa17.95■□□□□ 0.46
TSC2-204ENST00000401874 SPC25Q9HBM1 224 aa17.95■□□□□ 0.46
TSC2-204ENST00000401874 FAM187AA6NFU0 413 aa17.95■□□□□ 0.46
TSC2-204ENST00000401874 DPF2Q92785 391 aa17.95■□□□□ 0.46
TSC2-204ENST00000401874 CNOT8Q9UFF9 292 aaKnown RBP17.95■□□□□ 0.46
TSC2-204ENST00000401874 GOLGA8IPA6NC78 632 aa17.95■□□□□ 0.46
TSC2-204ENST00000401874 GOLGA8JA6NMD2 632 aa17.95■□□□□ 0.46
TSC2-204ENST00000401874 E9PMD0 336 aa17.95■□□□□ 0.46
TSC2-204ENST00000401874 ATP1A1P05023 1023 aaKnown RBP17.95■□□□□ 0.46
TSC2-204ENST00000401874 IFRD2Q12894 506 aaPredicted RBP17.95■□□□□ 0.46
TSC2-204ENST00000401874 MTERF2Q49AM1 385 aa17.95■□□□□ 0.46
TSC2-204ENST00000401874 ATP6V1G3Q96LB4 118 aa17.95■□□□□ 0.46
TSC2-204ENST00000401874 RFX1P22670 979 aa17.95■□□□□ 0.46
TSC2-204ENST00000401874 PRDX5P30044 214 aa17.95■□□□□ 0.46
TSC2-204ENST00000401874 NAALADL2Q58DX5 795 aa17.95■□□□□ 0.46
TSC2-204ENST00000401874 PDXDC1Q6P996 788 aa17.95■□□□□ 0.46
TSC2-204ENST00000401874 TOM1L1O75674 476 aa17.94■□□□□ 0.46
TSC2-204ENST00000401874 CHRNA3P32297 505 aa17.94■□□□□ 0.46
TSC2-204ENST00000401874 MUM1L1Q5H9M0 696 aa17.94■□□□□ 0.46
TSC2-204ENST00000401874 TTC25Q96NG3 672 aa17.94■□□□□ 0.46
TSC2-204ENST00000401874 SMYD2Q9NRG4 433 aa17.94■□□□□ 0.46
TSC2-204ENST00000401874 ZNF609O15014 1411 aa17.94■□□□□ 0.46
TSC2-204ENST00000401874 UTYO14607 1347 aa17.94■□□□□ 0.46
TSC2-204ENST00000401874 PLEKHG2Q9H7P9 1386 aa17.94■□□□□ 0.46
TSC2-204ENST00000401874 NCK2O43639 380 aa17.94■□□□□ 0.46
TSC2-204ENST00000401874 NMT2O60551 498 aa17.94■□□□□ 0.46
TSC2-204ENST00000401874 MAGOHP61326 146 aaKnown RBP17.94■□□□□ 0.46
TSC2-204ENST00000401874 OR6B2Q6IFH4 312 aa17.94■□□□□ 0.46
TSC2-204ENST00000401874 XXYLT1Q8NBI6 393 aa17.94■□□□□ 0.46
TSC2-204ENST00000401874 N4BP2L2Q92802 583 aaPredicted RBP17.94■□□□□ 0.46
TSC2-204ENST00000401874 EPC1Q9H2F5 836 aa17.94■□□□□ 0.46
TSC2-204ENST00000401874 SNX25Q9H3E2 840 aa17.94■□□□□ 0.46
TSC2-204ENST00000401874 SAYSD1Q9NPB0 183 aa17.94■□□□□ 0.46
TSC2-204ENST00000401874 ANAPC7Q9UJX3 599 aa17.94■□□□□ 0.46
TSC2-204ENST00000401874 TLK1Q9UKI8 766 aa17.94■□□□□ 0.46
TSC2-204ENST00000401874 FAF1Q9UNN5 650 aaPredicted RBP17.94■□□□□ 0.46
TSC2-204ENST00000401874 SFI1A8K8P3 1242 aa17.94■□□□□ 0.46
TSC2-204ENST00000401874 KRT39Q6A163 491 aa17.94■□□□□ 0.46
TSC2-204ENST00000401874 ATG9AQ7Z3C6 839 aa17.94■□□□□ 0.46
TSC2-204ENST00000401874 PCGF5Q86SE9 256 aa17.94■□□□□ 0.46
TSC2-204ENST00000401874 CCNYQ8ND76 341 aa17.94■□□□□ 0.46
TSC2-204ENST00000401874 ANKRD7Q92527 254 aa17.94■□□□□ 0.46
TSC2-204ENST00000401874 VIPAS39Q9H9C1 493 aa17.94■□□□□ 0.46
TSC2-204ENST00000401874 KIAA1586Q9HCI6 787 aa17.94■□□□□ 0.46
TSC2-204ENST00000401874 NXF1Q9UBU9 619 aaKnown RBP17.94■□□□□ 0.46
TSC2-204ENST00000401874 NLRP14Q86W24 1093 aa17.94■□□□□ 0.46
TSC2-204ENST00000401874 ERICH1Q86X53 443 aa17.94■□□□□ 0.46
TSC2-204ENST00000401874 CFAP36Q96G28 342 aa17.94■□□□□ 0.46
TSC2-204ENST00000401874 EFHD1Q9BUP0 239 aa17.94■□□□□ 0.46
TSC2-204ENST00000401874 ARL4CP56559 192 aa17.93■□□□□ 0.46
TSC2-204ENST00000401874 PEX3P56589 373 aa17.93■□□□□ 0.46
TSC2-204ENST00000401874 ZNF449Q6P9G9 518 aa17.93■□□□□ 0.46
TSC2-204ENST00000401874 FAM149B1Q96BN6 582 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms