RNA–Protein interactions for RNA: ENST00000395853.5

MSH5-205, Transcript of mutS homolog 5, humanhuman

TSL 2 BASIC

Gene MSH5, Length 2,704 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-205ENST00000395853 FADS3Q9Y5Q0 445 aa9.65□□□□□ -0.86
MSH5-205ENST00000395853 USH1CQ9Y6N9 552 aa9.65□□□□□ -0.86
MSH5-205ENST00000395853 CCT8L1PA6NM43 557 aa9.64□□□□□ -0.87
MSH5-205ENST00000395853 EYA2O00167 538 aa9.64□□□□□ -0.87
MSH5-205ENST00000395853 TEX28O15482 410 aa9.64□□□□□ -0.87
MSH5-205ENST00000395853 ZMYND10O75800 440 aa9.64□□□□□ -0.87
MSH5-205ENST00000395853 LARGE1O95461 756 aa9.64□□□□□ -0.87
MSH5-205ENST00000395853 PDCP20941 246 aa9.64□□□□□ -0.87
MSH5-205ENST00000395853 HPCAP84074 193 aa9.64□□□□□ -0.87
MSH5-205ENST00000395853 COBLL1Q53SF7 1204 aa9.64□□□□□ -0.87
MSH5-205ENST00000395853 OLFML2BQ68BL8 750 aa9.64□□□□□ -0.87
MSH5-205ENST00000395853 NCAPH2Q6IBW4 605 aa9.64□□□□□ -0.87
MSH5-205ENST00000395853 RNF10Q8N5U6 811 aaKnown RBP9.64□□□□□ -0.87
MSH5-205ENST00000395853 SCAIQ8N9R8 606 aa9.64□□□□□ -0.87
MSH5-205ENST00000395853 FBF1Q8TES7 1133 aa9.64□□□□□ -0.87
MSH5-205ENST00000395853 HAUS7Q99871 368 aa9.64□□□□□ -0.87
MSH5-205ENST00000395853 TPK1Q9H3S4 243 aa9.64□□□□□ -0.87
MSH5-205ENST00000395853 INTUQ9ULD6 942 aa9.64□□□□□ -0.87
MSH5-205ENST00000395853 CLEC11AQ9Y240 323 aa9.64□□□□□ -0.87
MSH5-205ENST00000395853 FAM32AQ9Y421 112 aaKnown RBP9.64□□□□□ -0.87
MSH5-205ENST00000395853 SLC30A1Q9Y6M5 507 aa9.64□□□□□ -0.87
MSH5-205ENST00000395853 MED23Q9ULK4 1368 aa9.64□□□□□ -0.87
MSH5-205ENST00000395853 MAP3K15Q6ZN16 1313 aa9.64□□□□□ -0.87
MSH5-205ENST00000395853 ZNF541Q9H0D2 1346 aa9.64□□□□□ -0.87
MSH5-205ENST00000395853 E7ENQ6 273 aa9.64□□□□□ -0.87
MSH5-205ENST00000395853 SERPINC1P01008 464 aa9.64□□□□□ -0.87
MSH5-205ENST00000395853 NQO1P15559 274 aaKnown RBP9.64□□□□□ -0.87
MSH5-205ENST00000395853 IL15P40933 162 aaPredicted RBP9.64□□□□□ -0.87
MSH5-205ENST00000395853 CCNFP41002 786 aa9.64□□□□□ -0.87
MSH5-205ENST00000395853 IARSP41252 1262 aaKnown RBP9.64□□□□□ -0.87
MSH5-205ENST00000395853 KCNA1Q09470 495 aa9.64□□□□□ -0.87
MSH5-205ENST00000395853 SUZ12Q15022 739 aaKnown RBP9.64□□□□□ -0.87
MSH5-205ENST00000395853 QPCTQ16769 361 aa9.64□□□□□ -0.87
MSH5-205ENST00000395853 EAPPQ56P03 285 aaPredicted RBP9.64□□□□□ -0.87
MSH5-205ENST00000395853 SPDYCQ5MJ68 293 aa9.64□□□□□ -0.87
MSH5-205ENST00000395853 TPTE2Q6XPS3 522 aa9.64□□□□□ -0.87
MSH5-205ENST00000395853 CCDC129Q6ZRS4 1044 aa9.64□□□□□ -0.87
MSH5-205ENST00000395853 ARFGAP2Q8N6H7 521 aa9.64□□□□□ -0.87
MSH5-205ENST00000395853 PDCD7Q8N8D1 485 aaKnown RBP9.64□□□□□ -0.87
MSH5-205ENST00000395853 ZSWIM6Q9HCJ5 1215 aa9.64□□□□□ -0.87
MSH5-205ENST00000395853 ZNF304Q9HCX3 659 aa9.64□□□□□ -0.87
MSH5-205ENST00000395853 JADE2Q9NQC1 790 aa9.64□□□□□ -0.87
MSH5-205ENST00000395853 ETNK2Q9NVF9 386 aa9.64□□□□□ -0.87
MSH5-205ENST00000395853 CTNNAL1Q9UBT7 734 aa9.64□□□□□ -0.87
MSH5-205ENST00000395853 BICDL2A1A5D9 508 aa9.63□□□□□ -0.87
MSH5-205ENST00000395853 TRAPPC3O43617 180 aa9.63□□□□□ -0.87
MSH5-205ENST00000395853 LMOD1P29536 600 aaPredicted RBP9.63□□□□□ -0.87
MSH5-205ENST00000395853 ALDH5A1P51649 535 aaPredicted RBP9.63□□□□□ -0.87
MSH5-205ENST00000395853 ADARP55265 1226 aaKnown RBP9.63□□□□□ -0.87
MSH5-205ENST00000395853 LACTBP83111 547 aaPredicted RBP9.63□□□□□ -0.87
MSH5-205ENST00000395853 APBA1Q02410 837 aa9.63□□□□□ -0.87
MSH5-205ENST00000395853 GUCY2DQ02846 1103 aa9.63□□□□□ -0.87
MSH5-205ENST00000395853 TRIM28Q13263 835 aaKnown RBP9.63□□□□□ -0.87
MSH5-205ENST00000395853 SLC35F6Q8N357 371 aa9.63□□□□□ -0.87
MSH5-205ENST00000395853 NOC3LQ8WTT2 800 aaKnown RBP9.63□□□□□ -0.87
MSH5-205ENST00000395853 IRGQQ8WZA9 623 aa9.63□□□□□ -0.87
MSH5-205ENST00000395853 PRCCQ92733 491 aaPredicted RBP9.63□□□□□ -0.87
MSH5-205ENST00000395853 VMP1Q96GC9 406 aa9.63□□□□□ -0.87
MSH5-205ENST00000395853 SPATA16Q9BXB7 569 aa9.63□□□□□ -0.87
MSH5-205ENST00000395853 PPP1R12CQ9BZL4 782 aa9.63□□□□□ -0.87
MSH5-205ENST00000395853 TBCCD1Q9NVR7 557 aa9.63□□□□□ -0.87
MSH5-205ENST00000395853 EURLQ9NYK6 297 aa9.63□□□□□ -0.87
MSH5-205ENST00000395853 MTUS1Q9ULD2 1270 aa9.63□□□□□ -0.87
MSH5-205ENST00000395853 NUP98P52948 1817 aa9.63□□□□□ -0.87
MSH5-205ENST00000395853 TAF5LO75529 589 aa9.63□□□□□ -0.87
MSH5-205ENST00000395853 LCA5LO95447 670 aa9.63□□□□□ -0.87
MSH5-205ENST00000395853 PCCAP05165 728 aaPredicted RBP9.63□□□□□ -0.87
MSH5-205ENST00000395853 C6orf183Q5T699 404 aa9.63□□□□□ -0.87
MSH5-205ENST00000395853 CCDC24Q8N4L8 307 aa9.63□□□□□ -0.87
MSH5-205ENST00000395853 USP6NLQ92738 828 aa9.63□□□□□ -0.87
MSH5-205ENST00000395853 GSDMAQ96QA5 445 aa9.63□□□□□ -0.87
MSH5-205ENST00000395853 TUBGCP5Q96RT8 1024 aa9.63□□□□□ -0.87
MSH5-205ENST00000395853 CLK4Q9HAZ1 481 aaKnown RBP9.63□□□□□ -0.87
MSH5-205ENST00000395853 AS3MTQ9HBK9 375 aa9.63□□□□□ -0.87
MSH5-205ENST00000395853 PDP2Q9P2J9 529 aa9.63□□□□□ -0.87
MSH5-205ENST00000395853 RASAL2Q9UJF2 1139 aa9.63□□□□□ -0.87
MSH5-205ENST00000395853 IKBKGQ9Y6K9 419 aa9.63□□□□□ -0.87
MSH5-205ENST00000395853 ZNF609O15014 1411 aa9.63□□□□□ -0.87
MSH5-205ENST00000395853 CCDC162PA2VCL2 907 aa9.62□□□□□ -0.87
MSH5-205ENST00000395853 CFAP69A5D8W1 941 aa9.62□□□□□ -0.87
MSH5-205ENST00000395853 MLLT1Q03111 559 aaPredicted RBP9.62□□□□□ -0.87
MSH5-205ENST00000395853 FAM209AQ5JX71 171 aa9.62□□□□□ -0.87
MSH5-205ENST00000395853 C3orf62Q6ZUJ4 267 aa9.62□□□□□ -0.87
MSH5-205ENST00000395853 GRAMD2AQ8IUY3 354 aa9.62□□□□□ -0.87
MSH5-205ENST00000395853 PDILTQ8N807 584 aa9.62□□□□□ -0.87
MSH5-205ENST00000395853 ANKS4BQ8N8V4 417 aa9.62□□□□□ -0.87
MSH5-205ENST00000395853 ZBTB38Q8NAP3 1195 aaPredicted RBP9.62□□□□□ -0.87
MSH5-205ENST00000395853 MORC4Q8TE76 937 aa9.62□□□□□ -0.87
MSH5-205ENST00000395853 EPSTI1Q96J88 318 aa9.62□□□□□ -0.87
MSH5-205ENST00000395853 PANX2Q96RD6 677 aa9.62□□□□□ -0.87
MSH5-205ENST00000395853 BEGAINQ9BUH8 593 aa9.62□□□□□ -0.87
MSH5-205ENST00000395853 TM6SF1Q9BZW5 370 aa9.62□□□□□ -0.87
MSH5-205ENST00000395853 ADAM22Q9P0K1 906 aa9.62□□□□□ -0.87
MSH5-205ENST00000395853 CTTNBP2NLQ9P2B4 639 aa9.62□□□□□ -0.87
MSH5-205ENST00000395853 CFAP45Q9UL16 551 aa9.62□□□□□ -0.87
MSH5-205ENST00000395853 CYP46A1Q9Y6A2 500 aa9.62□□□□□ -0.87
MSH5-205ENST00000395853 SNED1Q8TER0 1413 aa9.62□□□□□ -0.87
MSH5-205ENST00000395853 CA12O43570 354 aa9.62□□□□□ -0.87
MSH5-205ENST00000395853 FBXO21O94952 628 aa9.62□□□□□ -0.87
MSH5-205ENST00000395853 ZKSCAN1P17029 563 aaPredicted RBP9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms