RNA–Protein interactions for RNA: ENST00000394258.6

RCCD1-201, Transcript of RCC1 domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RCCD1, Length 2,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-201ENST00000394258 UTRNP46939 3433 aa21.44■■□□□ 1.02
RCCD1-201ENST00000394258 ZSCAN5CA6NGD5 496 aaPredicted RBP21.43■■□□□ 1.02
RCCD1-201ENST00000394258 PDXKO00764 312 aa21.43■■□□□ 1.02
RCCD1-201ENST00000394258 FRMD5Q7Z6J6 570 aa21.43■■□□□ 1.02
RCCD1-201ENST00000394258 AIPL1Q9NZN9 384 aa21.43■■□□□ 1.02
RCCD1-201ENST00000394258 PKD2L1Q9P0L9 805 aa21.43■■□□□ 1.02
RCCD1-201ENST00000394258 SLC26A4O43511 780 aa21.43■■□□□ 1.02
RCCD1-201ENST00000394258 FAM13AO94988 1023 aa21.43■■□□□ 1.02
RCCD1-201ENST00000394258 HMGB2P26583 209 aaKnown RBP21.43■■□□□ 1.02
RCCD1-201ENST00000394258 NAB2Q15742 525 aa21.43■■□□□ 1.02
RCCD1-201ENST00000394258 ZNF572Q7Z3I7 529 aaPredicted RBP21.43■■□□□ 1.02
RCCD1-201ENST00000394258 RNF10Q8N5U6 811 aaKnown RBP21.43■■□□□ 1.02
RCCD1-201ENST00000394258 AFAP1L1Q8TED9 768 aa21.43■■□□□ 1.02
RCCD1-201ENST00000394258 HSD17B14Q9BPX1 270 aa21.43■■□□□ 1.02
RCCD1-201ENST00000394258 GLIS2Q9BZE0 524 aaPredicted RBP21.43■■□□□ 1.02
RCCD1-201ENST00000394258 SPDYE2BA6NHP3 402 aa21.42■■□□□ 1.02
RCCD1-201ENST00000394258 GCOM1H8Y6P7 765 aaPredicted RBP21.42■■□□□ 1.02
RCCD1-201ENST00000394258 POLR2MP0CAP2 368 aa21.42■■□□□ 1.02
RCCD1-201ENST00000394258 SPDYE6P0CI01 402 aa21.42■■□□□ 1.02
RCCD1-201ENST00000394258 NOP2P46087 812 aaKnown RBP21.42■■□□□ 1.02
RCCD1-201ENST00000394258 COG2Q14746 738 aa21.42■■□□□ 1.02
RCCD1-201ENST00000394258 ZNF571Q7Z3V5 609 aaPredicted RBP21.42■■□□□ 1.02
RCCD1-201ENST00000394258 POLR3CQ9BUI4 534 aaPredicted RBP21.42■■□□□ 1.02
RCCD1-201ENST00000394258 TYW1Q9NV66 732 aaKnown RBP21.42■■□□□ 1.02
RCCD1-201ENST00000394258 AJAP1Q9UKB5 411 aaPredicted RBP21.42■■□□□ 1.02
RCCD1-201ENST00000394258 ESYT3A0FGR9 886 aa21.42■■□□□ 1.02
RCCD1-201ENST00000394258 DDX39AO00148 427 aaKnown RBP21.42■■□□□ 1.02
RCCD1-201ENST00000394258 CYP3A4P08684 503 aa21.42■■□□□ 1.02
RCCD1-201ENST00000394258 LRRC31Q6UY01 552 aa21.42■■□□□ 1.02
RCCD1-201ENST00000394258 IRF2BP2Q7Z5L9 587 aa21.42■■□□□ 1.02
RCCD1-201ENST00000394258 TSEN2Q8NCE0 465 aaKnown RBP21.42■■□□□ 1.02
RCCD1-201ENST00000394258 TMEM39BQ9GZU3 492 aa21.42■■□□□ 1.02
RCCD1-201ENST00000394258 LUC7LQ9NQ29 371 aaKnown RBP21.42■■□□□ 1.02
RCCD1-201ENST00000394258 SRCAPQ6ZRS2 3230 aa21.42■■□□□ 1.02
RCCD1-201ENST00000394258 GOLGA6BA6NDN3 693 aa21.42■■□□□ 1.02
RCCD1-201ENST00000394258 PIK3CDO00329 1044 aa21.42■■□□□ 1.02
RCCD1-201ENST00000394258 GAS7O60861 476 aa21.42■■□□□ 1.02
RCCD1-201ENST00000394258 DLGAP5Q15398 846 aa21.42■■□□□ 1.02
RCCD1-201ENST00000394258 ARHGAP27Q6ZUM4 889 aa21.42■■□□□ 1.02
RCCD1-201ENST00000394258 RBM46Q8TBY0 533 aaKnown RBP21.42■■□□□ 1.02
RCCD1-201ENST00000394258 WRAP73Q9P2S5 460 aaPredicted RBP21.42■■□□□ 1.02
RCCD1-201ENST00000394258 ZNF70Q9UC06 446 aaPredicted RBP21.42■■□□□ 1.02
RCCD1-201ENST00000394258 ZBTB21Q9ULJ3 1066 aa21.42■■□□□ 1.02
RCCD1-201ENST00000394258 TMX2Q9Y320 296 aa21.42■■□□□ 1.02
RCCD1-201ENST00000394258 ARP10275 920 aa21.41■■□□□ 1.02
RCCD1-201ENST00000394258 EPB41P11171 864 aaKnown RBP21.41■■□□□ 1.02
RCCD1-201ENST00000394258 PLS1Q14651 629 aa21.41■■□□□ 1.02
RCCD1-201ENST00000394258 DPY19L2P1Q6NXN4 242 aa21.41■■□□□ 1.02
RCCD1-201ENST00000394258 GOPCQ9HD26 462 aa21.41■■□□□ 1.02
RCCD1-201ENST00000394258 HERC5Q9UII4 1024 aaKnown RBP21.41■■□□□ 1.02
RCCD1-201ENST00000394258 TGFB1I1O43294 461 aa21.41■■□□□ 1.02
RCCD1-201ENST00000394258 MAEAQ7L5Y9 396 aa21.41■■□□□ 1.02
RCCD1-201ENST00000394258 SLC35C1Q96A29 364 aa21.41■■□□□ 1.02
RCCD1-201ENST00000394258 GCNT4Q9P109 453 aa21.41■■□□□ 1.02
RCCD1-201ENST00000394258 STIM2Q9P246 746 aa21.41■■□□□ 1.02
RCCD1-201ENST00000394258 PSMD10O75832 226 aa21.4■■□□□ 1.02
RCCD1-201ENST00000394258 GLI1P08151 1106 aa21.4■■□□□ 1.02
RCCD1-201ENST00000394258 RPL13P26373 211 aaKnown RBP21.4■■□□□ 1.02
RCCD1-201ENST00000394258 IRX3P78415 501 aaPredicted RBP21.4■■□□□ 1.02
RCCD1-201ENST00000394258 C8orf74Q6P047 294 aa21.4■■□□□ 1.02
RCCD1-201ENST00000394258 TRMT1LQ7Z2T5 733 aaKnown RBP21.4■■□□□ 1.02
RCCD1-201ENST00000394258 EPHA7Q15375 998 aa21.4■■□□□ 1.02
RCCD1-201ENST00000394258 CFAP221Q4G0U5 840 aa21.4■■□□□ 1.02
RCCD1-201ENST00000394258 ZNF277Q9NRM2 450 aaPredicted RBP21.4■■□□□ 1.02
RCCD1-201ENST00000394258 TULP1O00294 542 aaPredicted RBP21.39■■□□□ 1.01
RCCD1-201ENST00000394258 ITIH3Q06033 890 aa21.39■■□□□ 1.01
RCCD1-201ENST00000394258 TRADDQ15628 312 aa21.39■■□□□ 1.01
RCCD1-201ENST00000394258 C1orf186Q6ZWK4 172 aa21.39■■□□□ 1.01
RCCD1-201ENST00000394258 GOLGA6L1Q8N7Z2 621 aa21.39■■□□□ 1.01
RCCD1-201ENST00000394258 ZNF577Q9BSK1 485 aa21.39■■□□□ 1.01
RCCD1-201ENST00000394258 CYP2J2P51589 502 aa21.39■■□□□ 1.01
RCCD1-201ENST00000394258 GBP6Q6ZN66 633 aa21.39■■□□□ 1.01
RCCD1-201ENST00000394258 OGFOD1Q8N543 542 aa21.39■■□□□ 1.01
RCCD1-201ENST00000394258 BANK1Q8NDB2 785 aa21.39■■□□□ 1.01
RCCD1-201ENST00000394258 PDGFDQ9GZP0 370 aaPredicted RBP21.39■■□□□ 1.01
RCCD1-201ENST00000394258 GRID2IPA4D2P6 1211 aa21.38■■□□□ 1.01
RCCD1-201ENST00000394258 CEP55Q53EZ4 464 aa21.38■■□□□ 1.01
RCCD1-201ENST00000394258 RSBN1LQ6PCB5 846 aaPredicted RBP21.38■■□□□ 1.01
RCCD1-201ENST00000394258 RDH13Q8NBN7 331 aa21.38■■□□□ 1.01
RCCD1-201ENST00000394258 CARSP49589 748 aaKnown RBP21.38■■□□□ 1.01
RCCD1-201ENST00000394258 LARGE2Q8N3Y3 721 aa21.38■■□□□ 1.01
RCCD1-201ENST00000394258 FAM151AQ8WW52 585 aa21.38■■□□□ 1.01
RCCD1-201ENST00000394258 UNC45AQ9H3U1 944 aa21.38■■□□□ 1.01
RCCD1-201ENST00000394258 PARVGQ9HBI0 331 aa21.38■■□□□ 1.01
RCCD1-201ENST00000394258 PLCB1Q9NQ66 1216 aa21.38■■□□□ 1.01
RCCD1-201ENST00000394258 STK24Q9Y6E0 443 aa21.38■■□□□ 1.01
RCCD1-201ENST00000394258 FAM153BP0C7A2 387 aa21.37■■□□□ 1.01
RCCD1-201ENST00000394258 PRELPP51888 382 aa21.37■■□□□ 1.01
RCCD1-201ENST00000394258 BMT2Q1RMZ1 405 aa21.37■■□□□ 1.01
RCCD1-201ENST00000394258 FAM153CQ494X1 144 aa21.37■■□□□ 1.01
RCCD1-201ENST00000394258 ALKBH5Q6P6C2 394 aaKnown RBP21.37■■□□□ 1.01
RCCD1-201ENST00000394258 PACS2Q86VP3 889 aa21.37■■□□□ 1.01
RCCD1-201ENST00000394258 FAM186BQ8IYM0 893 aa21.37■■□□□ 1.01
RCCD1-201ENST00000394258 PROCA1Q8NCQ7 364 aaPredicted RBP21.37■■□□□ 1.01
RCCD1-201ENST00000394258 CHURC1Q8WUH1 139 aa21.37■■□□□ 1.01
RCCD1-201ENST00000394258 IFT81Q8WYA0 676 aa21.37■■□□□ 1.01
RCCD1-201ENST00000394258 RABEP2Q9H5N1 569 aa21.37■■□□□ 1.01
RCCD1-201ENST00000394258 SIX2Q9NPC8 291 aa21.37■■□□□ 1.01
RCCD1-201ENST00000394258 FAM153AQ9UHL3 310 aa21.37■■□□□ 1.01
RCCD1-201ENST00000394258 GFPT2O94808 682 aa21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms