RNA–Protein interactions for RNA: ENST00000393459.5

SFXN3-202, Transcript of sideroflexin 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SFXN3, Length 3,098 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-202ENST00000393459 CASP4P49662 377 aa15.81■□□□□ 0.12
SFXN3-202ENST00000393459 ECT2Q9H8V3 914 aa15.81■□□□□ 0.12
SFXN3-202ENST00000393459 KCNQ5Q9NR82 932 aa15.81■□□□□ 0.12
SFXN3-202ENST00000393459 CCDC87Q9NVE4 849 aa15.81■□□□□ 0.12
SFXN3-202ENST00000393459 PPP1R9AQ9ULJ8 1098 aa15.81■□□□□ 0.12
SFXN3-202ENST00000393459 A0A1W2PQJ5 194 aa15.8■□□□□ 0.12
SFXN3-202ENST00000393459 KRT16P08779 473 aa15.8■□□□□ 0.12
SFXN3-202ENST00000393459 REXO1Q8N1G1 1221 aaKnown RBP15.8■□□□□ 0.12
SFXN3-202ENST00000393459 FAM84BQ96KN1 310 aaPredicted RBP15.8■□□□□ 0.12
SFXN3-202ENST00000393459 TMEM237Q96Q45 408 aa15.8■□□□□ 0.12
SFXN3-202ENST00000393459 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.8■□□□□ 0.12
SFXN3-202ENST00000393459 LOC102724428A0A0B4J2F2 783 aa15.8■□□□□ 0.12
SFXN3-202ENST00000393459 PIAS1O75925 651 aa15.8■□□□□ 0.12
SFXN3-202ENST00000393459 MARCKSL1P49006 195 aa15.8■□□□□ 0.12
SFXN3-202ENST00000393459 SIK1P57059 783 aa15.8■□□□□ 0.12
SFXN3-202ENST00000393459 FKBP3Q00688 224 aaKnown RBP15.8■□□□□ 0.12
SFXN3-202ENST00000393459 PABPC4Q13310 644 aaKnown RBP eCLIP15.8■□□□□ 0.12
SFXN3-202ENST00000393459 DENND2CQ68D51 928 aa15.8■□□□□ 0.12
SFXN3-202ENST00000393459 RNF217Q8TC41 542 aa15.8■□□□□ 0.12
SFXN3-202ENST00000393459 BMP2KQ9NSY1 1161 aaPredicted RBP15.8■□□□□ 0.12
SFXN3-202ENST00000393459 MYH7BA7E2Y1 1941 aa15.79■□□□□ 0.12
SFXN3-202ENST00000393459 UBAP1LF5GYI3 381 aa15.79■□□□□ 0.12
SFXN3-202ENST00000393459 SATB1Q01826 763 aa15.79■□□□□ 0.12
SFXN3-202ENST00000393459 PICALMQ13492 652 aa15.79■□□□□ 0.12
SFXN3-202ENST00000393459 ZNF449Q6P9G9 518 aa15.79■□□□□ 0.12
SFXN3-202ENST00000393459 RFX8Q6ZV50 586 aa15.79■□□□□ 0.12
SFXN3-202ENST00000393459 SPDYE1Q8NFV5 336 aaPredicted RBP15.79■□□□□ 0.12
SFXN3-202ENST00000393459 BTBD6Q96KE9 485 aa15.79■□□□□ 0.12
SFXN3-202ENST00000393459 ACP6Q9NPH0 428 aa15.79■□□□□ 0.12
SFXN3-202ENST00000393459 USP17L5A8MUK1 530 aa15.79■□□□□ 0.12
SFXN3-202ENST00000393459 ATRNO75882 1429 aa15.79■□□□□ 0.12
SFXN3-202ENST00000393459 FGFR1OPO95684 399 aaKnown RBP15.79■□□□□ 0.12
SFXN3-202ENST00000393459 WLSQ5T9L3 541 aa15.79■□□□□ 0.12
SFXN3-202ENST00000393459 TRPM8Q7Z2W7 1104 aa15.79■□□□□ 0.12
SFXN3-202ENST00000393459 GPBP1Q86WP2 473 aa15.79■□□□□ 0.12
SFXN3-202ENST00000393459 RPGRQ92834 1020 aaKnown RBP15.79■□□□□ 0.12
SFXN3-202ENST00000393459 NSUN4Q96CB9 384 aaKnown RBP15.79■□□□□ 0.12
SFXN3-202ENST00000393459 ZNF512BQ96KM6 892 aaPredicted RBP15.79■□□□□ 0.12
SFXN3-202ENST00000393459 ZNF570Q96NI8 536 aa15.79■□□□□ 0.12
SFXN3-202ENST00000393459 C7orf25Q9BPX7 421 aa15.79■□□□□ 0.12
SFXN3-202ENST00000393459 ZMYND12Q9H0C1 365 aa15.79■□□□□ 0.12
SFXN3-202ENST00000393459 BARHL2Q9NY43 387 aa15.79■□□□□ 0.12
SFXN3-202ENST00000393459 CEP72Q9P209 647 aa15.79■□□□□ 0.12
SFXN3-202ENST00000393459 POTEFA5A3E0 1075 aa15.79■□□□□ 0.12
SFXN3-202ENST00000393459 ORC4O43929 436 aa15.79■□□□□ 0.12
SFXN3-202ENST00000393459 POTEIP0CG38 1075 aa15.79■□□□□ 0.12
SFXN3-202ENST00000393459 POTEGQ6S5H5 508 aa15.79■□□□□ 0.12
SFXN3-202ENST00000393459 POTEEQ6S8J3 1075 aa15.79■□□□□ 0.12
SFXN3-202ENST00000393459 UNC13DQ70J99 1090 aa15.79■□□□□ 0.12
SFXN3-202ENST00000393459 BZW1Q7L1Q6 419 aaKnown RBP15.79■□□□□ 0.12
SFXN3-202ENST00000393459 YTHDF3Q7Z739 585 aaKnown RBP15.79■□□□□ 0.12
SFXN3-202ENST00000393459 PALB2Q86YC2 1186 aa15.79■□□□□ 0.12
SFXN3-202ENST00000393459 RBM46Q8TBY0 533 aaKnown RBP15.79■□□□□ 0.12
SFXN3-202ENST00000393459 RNF25Q96BH1 459 aaPredicted RBP15.79■□□□□ 0.12
SFXN3-202ENST00000393459 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.79■□□□□ 0.125e-7■■■■□ 19.8
SFXN3-202ENST00000393459 DDX23Q9BUQ8 820 aaKnown RBP15.79■□□□□ 0.12
SFXN3-202ENST00000393459 TAS2R14Q9NYV8 317 aa15.79■□□□□ 0.12
SFXN3-202ENST00000393459 NAGPAQ9UK23 515 aa15.79■□□□□ 0.12
SFXN3-202ENST00000393459 ANKRD36CQ5JPF3 1778 aa15.78■□□□□ 0.12
SFXN3-202ENST00000393459 SLC8A1P32418 973 aa15.78■□□□□ 0.12
SFXN3-202ENST00000393459 CRKLP46109 303 aaKnown RBP15.78■□□□□ 0.12
SFXN3-202ENST00000393459 ERFEQ4G0M1 354 aa15.78■□□□□ 0.12
SFXN3-202ENST00000393459 ZNF34Q8IZ26 560 aa15.78■□□□□ 0.12
SFXN3-202ENST00000393459 RNF10Q8N5U6 811 aaKnown RBP15.78■□□□□ 0.12
SFXN3-202ENST00000393459 PPP1R12CQ9BZL4 782 aa15.78■□□□□ 0.12
SFXN3-202ENST00000393459 IGSF9BQ9UPX0 1349 aa15.78■□□□□ 0.12
SFXN3-202ENST00000393459 CLSTN1O94985 981 aa15.78■□□□□ 0.12
SFXN3-202ENST00000393459 DR1Q01658 176 aa15.78■□□□□ 0.12
SFXN3-202ENST00000393459 PPP2R5BQ15173 497 aa15.78■□□□□ 0.12
SFXN3-202ENST00000393459 CAPRIN2Q6IMN6 1127 aaKnown RBP15.78■□□□□ 0.12
SFXN3-202ENST00000393459 INTS5Q6P9B9 1019 aaKnown RBP15.78■□□□□ 0.12
SFXN3-202ENST00000393459 HDAC9Q9UKV0 1011 aa15.78■□□□□ 0.12
SFXN3-202ENST00000393459 ZMYND8Q9ULU4 1186 aaPredicted RBP15.78■□□□□ 0.12
SFXN3-202ENST00000393459 RSPH10B2B2RC85 870 aa15.77■□□□□ 0.12
SFXN3-202ENST00000393459 RSPH10BP0C881 870 aa15.77■□□□□ 0.12
SFXN3-202ENST00000393459 NBPF20Q3BBV1 942 aa15.77■□□□□ 0.12
SFXN3-202ENST00000393459 PRUNE1Q86TP1 453 aa15.77■□□□□ 0.12
SFXN3-202ENST00000393459 C6orf50Q9HD87 102 aa15.77■□□□□ 0.12
SFXN3-202ENST00000393459 DAAM1Q9Y4D1 1078 aa15.77■□□□□ 0.12
SFXN3-202ENST00000393459 A6NNZ2 444 aa15.77■□□□□ 0.11
SFXN3-202ENST00000393459 PJA2O43164 708 aa15.77■□□□□ 0.11
SFXN3-202ENST00000393459 UCHL3P15374 230 aa15.77■□□□□ 0.11
SFXN3-202ENST00000393459 USP11P51784 963 aa15.77■□□□□ 0.11
SFXN3-202ENST00000393459 GALCP54803 685 aa15.77■□□□□ 0.11
SFXN3-202ENST00000393459 TMEM266Q2M3C6 531 aa15.77■□□□□ 0.11
SFXN3-202ENST00000393459 TUBB8Q3ZCM7 444 aa15.77■□□□□ 0.11
SFXN3-202ENST00000393459 LONP2Q86WA8 852 aa15.77■□□□□ 0.11
SFXN3-202ENST00000393459 TAB3Q8N5C8 712 aaPredicted RBP15.77■□□□□ 0.11
SFXN3-202ENST00000393459 CCDC26Q8TAB7 109 aa15.77■□□□□ 0.11
SFXN3-202ENST00000393459 NGLY1Q96IV0 654 aa15.77■□□□□ 0.11
SFXN3-202ENST00000393459 TSKSQ9UJT2 592 aa15.77■□□□□ 0.11
SFXN3-202ENST00000393459 TRPC6Q9Y210 931 aa15.77■□□□□ 0.11
SFXN3-202ENST00000393459 TCRBV7S2A1N4TA0A589 114 aa15.76■□□□□ 0.11
SFXN3-202ENST00000393459 USP17L15C9J2P7 530 aa15.76■□□□□ 0.11
SFXN3-202ENST00000393459 USP17L13C9JLJ4 530 aa15.76■□□□□ 0.11
SFXN3-202ENST00000393459 USP17L11C9JVI0 530 aa15.76■□□□□ 0.11
SFXN3-202ENST00000393459 USP17L18D6R9N7 530 aa15.76■□□□□ 0.11
SFXN3-202ENST00000393459 USP17L22D6RA61 530 aa15.76■□□□□ 0.11
SFXN3-202ENST00000393459 USP17L17D6RBQ6 530 aa15.76■□□□□ 0.11
SFXN3-202ENST00000393459 USP17L19D6RCP7 530 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms