RNA–Protein interactions for RNA: ENST00000392496.3

SPHK1-202, Transcript of sphingosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPHK1, Length 1,779 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1-202ENST00000392496 BCAS3Q9H6U6 928 aa23.55■■□□□ 1.36
SPHK1-202ENST00000392496 SLC9A2Q9UBY0 812 aa23.55■■□□□ 1.36
SPHK1-202ENST00000392496 NKRFO15226 690 aaKnown RBP eCLIP23.55■■□□□ 1.36
SPHK1-202ENST00000392496 SYCP1Q15431 976 aa23.55■■□□□ 1.36
SPHK1-202ENST00000392496 FIGNQ5HY92 759 aa23.55■■□□□ 1.36
SPHK1-202ENST00000392496 NYAP1Q6ZVC0 841 aa23.55■■□□□ 1.36
SPHK1-202ENST00000392496 ZNF720Q7Z2F6 126 aa23.55■■□□□ 1.36
SPHK1-202ENST00000392496 FAM178BQ8IXR5 827 aa23.55■■□□□ 1.36
SPHK1-202ENST00000392496 GTF3C2Q8WUA4 911 aaPredicted RBP23.55■■□□□ 1.36
SPHK1-202ENST00000392496 PPP1R13BQ96KQ4 1090 aa23.55■■□□□ 1.36
SPHK1-202ENST00000392496 CCDC43Q96MW1 224 aaKnown RBP23.55■■□□□ 1.36
SPHK1-202ENST00000392496 TXNRD2Q9NNW7 524 aa23.55■■□□□ 1.36
SPHK1-202ENST00000392496 ABHD10Q9NUJ1 306 aa23.55■■□□□ 1.36
SPHK1-202ENST00000392496 CAPN11Q9UMQ6 739 aa23.55■■□□□ 1.36
SPHK1-202ENST00000392496 R3HCC1Q9Y3T6 440 aaKnown RBP23.55■■□□□ 1.36
SPHK1-202ENST00000392496 SOWAHBA6NEL2 793 aa23.54■■□□□ 1.36
SPHK1-202ENST00000392496 PSAPP07602 524 aa23.54■■□□□ 1.36
SPHK1-202ENST00000392496 MAPTP10636 758 aaKnown RBP23.54■■□□□ 1.36
SPHK1-202ENST00000392496 NMT1P30419 496 aaKnown RBP23.54■■□□□ 1.36
SPHK1-202ENST00000392496 DAW1Q8N136 415 aa23.54■■□□□ 1.36
SPHK1-202ENST00000392496 C2orf69Q8N8R5 385 aa23.54■■□□□ 1.36
SPHK1-202ENST00000392496 PNMA3Q9UL41 463 aa23.54■■□□□ 1.36
SPHK1-202ENST00000392496 ITGBL1O95965 494 aaPredicted RBP23.53■■□□□ 1.36
SPHK1-202ENST00000392496 TNNT1P13805 278 aa23.53■■□□□ 1.36
SPHK1-202ENST00000392496 NR2F2P24468 414 aa23.53■■□□□ 1.36
SPHK1-202ENST00000392496 KRT9P35527 623 aa23.53■■□□□ 1.36
SPHK1-202ENST00000392496 TERF1P54274 439 aa23.53■■□□□ 1.36
SPHK1-202ENST00000392496 PTPN14Q15678 1187 aa23.53■■□□□ 1.36
SPHK1-202ENST00000392496 NFIL3Q16649 462 aa23.53■■□□□ 1.36
SPHK1-202ENST00000392496 ODR4Q5SWX8 454 aa23.53■■□□□ 1.36
SPHK1-202ENST00000392496 ATP6V0A1Q93050 837 aa23.53■■□□□ 1.36
SPHK1-202ENST00000392496 TTYH3Q9C0H2 523 aa23.53■■□□□ 1.36
SPHK1-202ENST00000392496 LUC7L2Q9Y383 392 aaKnown RBP23.53■■□□□ 1.36
SPHK1-202ENST00000392496 PCDHB13Q9Y5F0 798 aa23.53■■□□□ 1.36
SPHK1-202ENST00000392496 TTC26A0AVF1 554 aa23.52■■□□□ 1.36
SPHK1-202ENST00000392496 RNF225M0QZC1 329 aaPredicted RBP23.52■■□□□ 1.36
SPHK1-202ENST00000392496 ZSCAN12O43309 604 aa23.52■■□□□ 1.36
SPHK1-202ENST00000392496 RPL13P26373 211 aaKnown RBP23.52■■□□□ 1.36
SPHK1-202ENST00000392496 TMTC1Q8IUR5 882 aa23.52■■□□□ 1.36
SPHK1-202ENST00000392496 TRIM59Q8IWR1 403 aa23.52■■□□□ 1.36
SPHK1-202ENST00000392496 LARSQ9P2J5 1176 aaKnown RBP23.52■■□□□ 1.36
SPHK1-202ENST00000392496 DOCK5Q9H7D0 1870 aa23.52■■□□□ 1.36
SPHK1-202ENST00000392496 KIF2AO00139 706 aaPredicted RBP23.52■■□□□ 1.36
SPHK1-202ENST00000392496 CELF2O95319 508 aaKnown RBP23.52■■□□□ 1.36
SPHK1-202ENST00000392496 ACTR2P61160 394 aa23.52■■□□□ 1.36
SPHK1-202ENST00000392496 Q3C1V9 767 aa23.52■■□□□ 1.36
SPHK1-202ENST00000392496 ABHD15Q6UXT9 468 aa23.52■■□□□ 1.36
SPHK1-202ENST00000392496 OTUD6AQ7L8S5 288 aa23.52■■□□□ 1.36
SPHK1-202ENST00000392496 MPHOSPH6Q99547 160 aaKnown RBP23.52■■□□□ 1.36
SPHK1-202ENST00000392496 STRA6Q9BX79 667 aa23.52■■□□□ 1.36
SPHK1-202ENST00000392496 MROH8Q9H579 483 aa23.52■■□□□ 1.36
SPHK1-202ENST00000392496 GABBR1Q9UBS5 961 aa23.52■■□□□ 1.36
SPHK1-202ENST00000392496 FAM184BQ9ULE4 1060 aa23.52■■□□□ 1.36
SPHK1-202ENST00000392496 SLC45A1Q9Y2W3 748 aa23.52■■□□□ 1.36
SPHK1-202ENST00000392496 A0A1W2PQJ5 194 aa23.51■■□□□ 1.35
SPHK1-202ENST00000392496 BACH1O14867 736 aa23.51■■□□□ 1.35
SPHK1-202ENST00000392496 USO1O60763 962 aaKnown RBP23.51■■□□□ 1.35
SPHK1-202ENST00000392496 ALCAMQ13740 583 aa23.51■■□□□ 1.35
SPHK1-202ENST00000392496 XKR9Q5GH70 373 aa23.51■■□□□ 1.35
SPHK1-202ENST00000392496 MIS18BP1Q6P0N0 1132 aa23.51■■□□□ 1.35
SPHK1-202ENST00000392496 FRMD5Q7Z6J6 570 aa23.51■■□□□ 1.35
SPHK1-202ENST00000392496 SHCBP1Q8NEM2 672 aa23.51■■□□□ 1.35
SPHK1-202ENST00000392496 OR8K1Q8NGG5 319 aa23.51■■□□□ 1.35
SPHK1-202ENST00000392496 SIK3Q9Y2K2 1263 aa23.51■■□□□ 1.35
SPHK1-202ENST00000392496 LRRC37A2A6NM11 1700 aa23.51■■□□□ 1.35
SPHK1-202ENST00000392496 ZMYM2Q9UBW7 1377 aa23.51■■□□□ 1.35
SPHK1-202ENST00000392496 RASSF10A6NK89 507 aa23.5■■□□□ 1.35
SPHK1-202ENST00000392496 SLC16A3O15427 465 aaKnown RBP23.5■■□□□ 1.35
SPHK1-202ENST00000392496 TGFB1I1O43294 461 aa23.5■■□□□ 1.35
SPHK1-202ENST00000392496 PPP1R37O75864 691 aa23.5■■□□□ 1.35
SPHK1-202ENST00000392496 CETPP11597 493 aa23.5■■□□□ 1.35
SPHK1-202ENST00000392496 TRIM21P19474 475 aaKnown RBP23.5■■□□□ 1.35
SPHK1-202ENST00000392496 SP2Q02086 613 aa23.5■■□□□ 1.35
SPHK1-202ENST00000392496 PRIMPOLQ96LW4 560 aa23.5■■□□□ 1.35
SPHK1-202ENST00000392496 DRC1Q96MC2 740 aa23.5■■□□□ 1.35
SPHK1-202ENST00000392496 PCMTD1Q96MG8 357 aaPredicted RBP23.5■■□□□ 1.35
SPHK1-202ENST00000392496 DNAJC7Q99615 494 aa23.5■■□□□ 1.35
SPHK1-202ENST00000392496 GBA2Q9HCG7 927 aaPredicted RBP23.5■■□□□ 1.35
SPHK1-202ENST00000392496 PPP2R2CQ9Y2T4 447 aa23.5■■□□□ 1.35
SPHK1-202ENST00000392496 NR3C1P04150 777 aa23.5■■□□□ 1.35
SPHK1-202ENST00000392496 TUBB4AP04350 444 aa23.5■■□□□ 1.35
SPHK1-202ENST00000392496 PLS3P13797 630 aa23.5■■□□□ 1.35
SPHK1-202ENST00000392496 GTF2A2P52657 109 aa23.5■■□□□ 1.35
SPHK1-202ENST00000392496 ERVK-9P63128 1117 aa23.5■■□□□ 1.35
SPHK1-202ENST00000392496 ERVK-24P63145 666 aa23.5■■□□□ 1.35
SPHK1-202ENST00000392496 PPP2R3AQ06190 1150 aa23.5■■□□□ 1.35
SPHK1-202ENST00000392496 KCNA1Q09470 495 aa23.5■■□□□ 1.35
SPHK1-202ENST00000392496 ZC2HC1CQ53FD0 456 aaPredicted RBP23.5■■□□□ 1.35
SPHK1-202ENST00000392496 UTP14CQ5TAP6 766 aaKnown RBP23.5■■□□□ 1.35
SPHK1-202ENST00000392496 SEPT14Q6ZU15 432 aa23.5■■□□□ 1.35
SPHK1-202ENST00000392496 ANO5Q75V66 913 aa23.5■■□□□ 1.35
SPHK1-202ENST00000392496 UTP18Q9Y5J1 556 aaKnown RBP eCLIP23.5■■□□□ 1.35
SPHK1-202ENST00000392496 DNAJC25-GNG10A0A024R161 153 aa23.49■■□□□ 1.35
SPHK1-202ENST00000392496 SOWAHDA6NJG2 315 aa23.49■■□□□ 1.35
SPHK1-202ENST00000392496 STBD1O95210 358 aa23.49■■□□□ 1.35
SPHK1-202ENST00000392496 ATG7O95352 703 aa23.49■■□□□ 1.35
SPHK1-202ENST00000392496 SUPT20HL2P0C7V6 817 aa23.49■■□□□ 1.35
SPHK1-202ENST00000392496 KLK7P49862 253 aa23.49■■□□□ 1.35
SPHK1-202ENST00000392496 KCTD2Q14681 263 aa23.49■■□□□ 1.35
SPHK1-202ENST00000392496 SWSAP1Q6NVH7 229 aa23.49■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms