RNA–Protein interactions for RNA: ENST00000390425.2

TRAV3-201, Transcript of T cell receptor alpha variable 3 (gene/pseudogene), humanhuman

APPRIS P1 BASIC

Gene TRAV3, Length 519 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV3-201ENST00000390425 HMGB1P09429 215 aaKnown RBP12.55□□□□□ -0.4
TRAV3-201ENST00000390425 KLRC1P26715 233 aa12.55□□□□□ -0.4
TRAV3-201ENST00000390425 ZNF76P36508 570 aa12.55□□□□□ -0.4
TRAV3-201ENST00000390425 PAN2Q504Q3 1202 aaKnown RBP12.55□□□□□ -0.4
TRAV3-201ENST00000390425 TMEM31Q5JXX7 168 aa12.55□□□□□ -0.4
TRAV3-201ENST00000390425 FAM160B1Q5W0V3 765 aa12.55□□□□□ -0.4
TRAV3-201ENST00000390425 KIAA0319LQ8IZA0 1049 aa12.55□□□□□ -0.4
TRAV3-201ENST00000390425 GJD3Q8N144 294 aa12.55□□□□□ -0.4
TRAV3-201ENST00000390425 REXO1Q8N1G1 1221 aaKnown RBP12.55□□□□□ -0.4
TRAV3-201ENST00000390425 PHKBQ93100 1093 aa12.55□□□□□ -0.4
TRAV3-201ENST00000390425 PLVAPQ9BX97 442 aa12.55□□□□□ -0.4
TRAV3-201ENST00000390425 ERVK-5Q9HDB9 667 aa12.55□□□□□ -0.4
TRAV3-201ENST00000390425 ALG13Q9NP73 1137 aaKnown RBP12.55□□□□□ -0.4
TRAV3-201ENST00000390425 ZNF302Q9NR11 478 aa12.55□□□□□ -0.4
TRAV3-201ENST00000390425 NOC2LQ9Y3T9 749 aaKnown RBP12.55□□□□□ -0.4
TRAV3-201ENST00000390425 M0QZ92 97 aa12.54□□□□□ -0.4
TRAV3-201ENST00000390425 LINC01565O15544 149 aa12.54□□□□□ -0.4
TRAV3-201ENST00000390425 PRPF3O43395 683 aaKnown RBP12.54□□□□□ -0.4
TRAV3-201ENST00000390425 GPR37L1O60883 481 aa12.54□□□□□ -0.4
TRAV3-201ENST00000390425 PPFIA3O75145 1194 aa12.54□□□□□ -0.4
TRAV3-201ENST00000390425 ITGB1P05556 798 aa12.54□□□□□ -0.4
TRAV3-201ENST00000390425 RPS6KB1P23443 525 aa12.54□□□□□ -0.4
TRAV3-201ENST00000390425 IRS1P35568 1242 aa12.54□□□□□ -0.4
TRAV3-201ENST00000390425 PLA2G5P39877 138 aa12.54□□□□□ -0.4
TRAV3-201ENST00000390425 SETQ01105 290 aaPredicted RBP12.54□□□□□ -0.4
TRAV3-201ENST00000390425 ZP2Q05996 745 aa12.54□□□□□ -0.4
TRAV3-201ENST00000390425 SWSAP1Q6NVH7 229 aa12.54□□□□□ -0.4
TRAV3-201ENST00000390425 PDXDC2PQ6P474 469 aa12.54□□□□□ -0.4
TRAV3-201ENST00000390425 BLOC1S2Q6QNY1 142 aa12.54□□□□□ -0.4
TRAV3-201ENST00000390425 ADGRD2Q7Z7M1 963 aa12.54□□□□□ -0.4
TRAV3-201ENST00000390425 NME8Q8N427 588 aa12.54□□□□□ -0.4
TRAV3-201ENST00000390425 FBXL16Q8N461 479 aa12.54□□□□□ -0.4
TRAV3-201ENST00000390425 TNPO1Q92973 898 aaKnown RBP12.54□□□□□ -0.4
TRAV3-201ENST00000390425 P2RX5Q93086 422 aa12.54□□□□□ -0.4
TRAV3-201ENST00000390425 HCSTQ9UBK5 93 aa12.54□□□□□ -0.4
TRAV3-201ENST00000390425 PLAGL2Q9UPG8 496 aa12.54□□□□□ -0.4
TRAV3-201ENST00000390425 MAFBQ9Y5Q3 323 aaPredicted RBP12.54□□□□□ -0.4
TRAV3-201ENST00000390425 CCDC196A0A1B0GTZ2 297 aa12.53□□□□□ -0.4
TRAV3-201ENST00000390425 CIITAP33076 1130 aa12.53□□□□□ -0.4
TRAV3-201ENST00000390425 FGD1P98174 961 aa12.53□□□□□ -0.4
TRAV3-201ENST00000390425 NFX1Q12986 1120 aaKnown RBP12.53□□□□□ -0.4
TRAV3-201ENST00000390425 PUS10Q3MIT2 529 aaKnown RBP12.53□□□□□ -0.4
TRAV3-201ENST00000390425 ZNF484Q5JVG2 852 aa12.53□□□□□ -0.4
TRAV3-201ENST00000390425 ZNF746Q6NUN9 644 aaPredicted RBP12.53□□□□□ -0.4
TRAV3-201ENST00000390425 MIS18BP1Q6P0N0 1132 aa12.53□□□□□ -0.4
TRAV3-201ENST00000390425 EP400NLQ6ZTU2 488 aa12.53□□□□□ -0.4
TRAV3-201ENST00000390425 FAM228AQ86W67 206 aa12.53□□□□□ -0.4
TRAV3-201ENST00000390425 KLHL23Q8NBE8 558 aa12.53□□□□□ -0.4
TRAV3-201ENST00000390425 SPPL3Q8TCT6 385 aa12.53□□□□□ -0.4
TRAV3-201ENST00000390425 PPP1R16BQ96T49 567 aa12.53□□□□□ -0.4
TRAV3-201ENST00000390425 ZNF577Q9BSK1 485 aa12.53□□□□□ -0.4
TRAV3-201ENST00000390425 C6orf50Q9HD87 102 aa12.53□□□□□ -0.4
TRAV3-201ENST00000390425 GINS2Q9Y248 185 aa12.53□□□□□ -0.4
TRAV3-201ENST00000390425 ARID2Q68CP9 1835 aa12.53□□□□□ -0.4
TRAV3-201ENST00000390425 C19orf67A6NJJ6 358 aa12.52□□□□□ -0.41
TRAV3-201ENST00000390425 C9IYK1 514 aa12.52□□□□□ -0.41
TRAV3-201ENST00000390425 MBTPS2O43462 519 aa12.52□□□□□ -0.41
TRAV3-201ENST00000390425 ZNF862O60290 1169 aa12.52□□□□□ -0.41
TRAV3-201ENST00000390425 RPS6KA5O75582 802 aa12.52□□□□□ -0.41
TRAV3-201ENST00000390425 VTNP04004 478 aa12.52□□□□□ -0.41
TRAV3-201ENST00000390425 STAG3L1P0CL83 205 aa12.52□□□□□ -0.41
TRAV3-201ENST00000390425 SSTR3P32745 418 aaPredicted RBP12.52□□□□□ -0.41
TRAV3-201ENST00000390425 SARSP49591 514 aaKnown RBP12.52□□□□□ -0.41
TRAV3-201ENST00000390425 CLUL1Q15846 466 aa12.52□□□□□ -0.41
TRAV3-201ENST00000390425 PRR16Q569H4 304 aa12.52□□□□□ -0.41
TRAV3-201ENST00000390425 SMAP1Q8IYB5 467 aaPredicted RBP12.52□□□□□ -0.41
TRAV3-201ENST00000390425 LINC01465Q8N7H1 131 aa12.52□□□□□ -0.41
TRAV3-201ENST00000390425 CCDC12Q8WUD4 166 aaPredicted RBP12.52□□□□□ -0.41
TRAV3-201ENST00000390425 BBXQ8WY36 941 aaPredicted RBP12.52□□□□□ -0.41
TRAV3-201ENST00000390425 OSMRQ99650 979 aa12.52□□□□□ -0.41
TRAV3-201ENST00000390425 ADAM2Q99965 735 aa12.52□□□□□ -0.41
TRAV3-201ENST00000390425 RNF26Q9BY78 433 aaPredicted RBP12.52□□□□□ -0.41
TRAV3-201ENST00000390425 NCOA5Q9HCD5 579 aaKnown RBP12.52□□□□□ -0.41
TRAV3-201ENST00000390425 TBC1D22BQ9NU19 505 aa12.52□□□□□ -0.41
TRAV3-201ENST00000390425 VPS54Q9P1Q0 977 aa12.52□□□□□ -0.41
TRAV3-201ENST00000390425 ST3GAL5Q9UNP4 418 aa12.52□□□□□ -0.41
TRAV3-201ENST00000390425 PCDHGC5Q9Y5F6 944 aa12.52□□□□□ -0.41
TRAV3-201ENST00000390425 NCK2O43639 380 aa12.51□□□□□ -0.41
TRAV3-201ENST00000390425 GPR32O75388 356 aa12.51□□□□□ -0.41
TRAV3-201ENST00000390425 IFNAR1P17181 557 aa12.51□□□□□ -0.41
TRAV3-201ENST00000390425 IBSPP21815 317 aaPredicted RBP12.51□□□□□ -0.41
TRAV3-201ENST00000390425 GNA11P29992 359 aa12.51□□□□□ -0.41
TRAV3-201ENST00000390425 PDIA3P30101 505 aaKnown RBP12.51□□□□□ -0.41
TRAV3-201ENST00000390425 CLCN3P51790 818 aa12.51□□□□□ -0.41
TRAV3-201ENST00000390425 EVCP57679 992 aa12.51□□□□□ -0.41
TRAV3-201ENST00000390425 DSC3Q14574 896 aa12.51□□□□□ -0.41
TRAV3-201ENST00000390425 SMAD2Q15796 467 aaKnown RBP12.51□□□□□ -0.41
TRAV3-201ENST00000390425 UGCGQ16739 394 aa12.51□□□□□ -0.41
TRAV3-201ENST00000390425 KIZQ2M2Z5 673 aa12.51□□□□□ -0.41
TRAV3-201ENST00000390425 NAALADL2Q58DX5 795 aa12.51□□□□□ -0.41
TRAV3-201ENST00000390425 FAM102BQ5T8I3 360 aa12.51□□□□□ -0.41
TRAV3-201ENST00000390425 MCTP2Q6DN12 878 aa12.51□□□□□ -0.41
TRAV3-201ENST00000390425 TRMT1LQ7Z2T5 733 aaKnown RBP12.51□□□□□ -0.41
TRAV3-201ENST00000390425 POF1BQ8WVV4 589 aa12.51□□□□□ -0.41
TRAV3-201ENST00000390425 MSLNLQ96KJ4 702 aa12.51□□□□□ -0.41
TRAV3-201ENST00000390425 SLC26A6Q9BXS9 759 aa12.51□□□□□ -0.41
TRAV3-201ENST00000390425 RGS18Q9NS28 235 aa12.51□□□□□ -0.41
TRAV3-201ENST00000390425 GABBR1Q9UBS5 961 aa12.51□□□□□ -0.41
TRAV3-201ENST00000390425 PRKAG3Q9UGI9 489 aa12.51□□□□□ -0.41
TRAV3-201ENST00000390425 PCDHA10Q9Y5I2 948 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms