RNA–Protein interactions for RNA: ENST00000366286.6

YBX3-203, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 704 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-203ENST00000366286 USP38Q8NB14 1042 aa11.7□□□□□ -0.54
YBX3-203ENST00000366286 BBXQ8WY36 941 aaPredicted RBP11.7□□□□□ -0.54
YBX3-203ENST00000366286 TNFRSF25Q93038 417 aa11.7□□□□□ -0.54
YBX3-203ENST00000366286 CERS4Q9HA82 394 aa11.7□□□□□ -0.54
YBX3-203ENST00000366286 LIMCH1Q9UPQ0 1083 aa11.7□□□□□ -0.54
YBX3-203ENST00000366286 FNDC1Q4ZHG4 1894 aaPredicted RBP11.7□□□□□ -0.54
YBX3-203ENST00000366286 ZNF862O60290 1169 aa11.69□□□□□ -0.54
YBX3-203ENST00000366286 CCNT1O60563 726 aaKnown RBP11.69□□□□□ -0.54
YBX3-203ENST00000366286 MMP1P03956 469 aa11.69□□□□□ -0.54
YBX3-203ENST00000366286 OATP04181 439 aa11.69□□□□□ -0.54
YBX3-203ENST00000366286 GCFC2P16383 781 aaKnown RBP11.69□□□□□ -0.54
YBX3-203ENST00000366286 IGFBP4P22692 258 aa11.69□□□□□ -0.54
YBX3-203ENST00000366286 RBM25P49756 843 aaKnown RBP11.69□□□□□ -0.54
YBX3-203ENST00000366286 IER5Q5VY09 327 aa11.69□□□□□ -0.54
YBX3-203ENST00000366286 B3GNT9Q6UX72 402 aa11.69□□□□□ -0.54
YBX3-203ENST00000366286 MIER3Q7Z3K6 550 aa11.69□□□□□ -0.54
YBX3-203ENST00000366286 RDM1Q8NG50 284 aa11.69□□□□□ -0.54
YBX3-203ENST00000366286 FAM167AQ96KS9 214 aa11.69□□□□□ -0.54
YBX3-203ENST00000366286 RAD9AQ99638 391 aa11.69□□□□□ -0.54
YBX3-203ENST00000366286 BRMS1Q9HCU9 246 aa11.69□□□□□ -0.54
YBX3-203ENST00000366286 KDM3AQ9Y4C1 1321 aa11.68□□□□□ -0.54
YBX3-203ENST00000366286 LINC01553A4QN01 128 aa11.68□□□□□ -0.54
YBX3-203ENST00000366286 RFXAPO00287 272 aa11.68□□□□□ -0.54
YBX3-203ENST00000366286 CD52P31358 61 aa11.68□□□□□ -0.54
YBX3-203ENST00000366286 CLCN3P51790 818 aa11.68□□□□□ -0.54
YBX3-203ENST00000366286 HTRA4P83105 476 aaPredicted RBP11.68□□□□□ -0.54
YBX3-203ENST00000366286 TRIM29Q14134 588 aa11.68□□□□□ -0.54
YBX3-203ENST00000366286 PPP4R3AQ6IN85 833 aa11.68□□□□□ -0.54
YBX3-203ENST00000366286 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.68□□□□□ -0.54
YBX3-203ENST00000366286 KIAA0319LQ8IZA0 1049 aa11.68□□□□□ -0.54
YBX3-203ENST00000366286 LINC01599Q8WXQ3 324 aa11.68□□□□□ -0.54
YBX3-203ENST00000366286 ARNTL2Q8WYA1 636 aa11.68□□□□□ -0.54
YBX3-203ENST00000366286 PPP1R16BQ96T49 567 aa11.68□□□□□ -0.54
YBX3-203ENST00000366286 CELF4Q9BZC1 486 aaKnown RBP11.68□□□□□ -0.54
YBX3-203ENST00000366286 AGO3Q9H9G7 860 aaKnown RBP11.68□□□□□ -0.54
YBX3-203ENST00000366286 KCNMB3Q9NPA1 279 aa11.68□□□□□ -0.54
YBX3-203ENST00000366286 VAV3Q9UKW4 847 aa11.68□□□□□ -0.54
YBX3-203ENST00000366286 CEP131Q9UPN4 1083 aa11.68□□□□□ -0.54
YBX3-203ENST00000366286 UPP2O95045 317 aa11.67□□□□□ -0.54
YBX3-203ENST00000366286 PAK2Q13177 524 aa11.67□□□□□ -0.54
YBX3-203ENST00000366286 PPP2R5CQ13362 524 aa11.67□□□□□ -0.54
YBX3-203ENST00000366286 KRT40Q6A162 431 aa11.67□□□□□ -0.54
YBX3-203ENST00000366286 DIS3L2Q8IYB7 885 aaKnown RBP11.67□□□□□ -0.54
YBX3-203ENST00000366286 NME8Q8N427 588 aa11.67□□□□□ -0.54
YBX3-203ENST00000366286 METTL13Q8N6R0 699 aa11.67□□□□□ -0.54
YBX3-203ENST00000366286 LINC01465Q8N7H1 131 aa11.67□□□□□ -0.54
YBX3-203ENST00000366286 SP7Q8TDD2 431 aaPredicted RBP11.67□□□□□ -0.54
YBX3-203ENST00000366286 GDPD5Q8WTR4 605 aa11.67□□□□□ -0.54
YBX3-203ENST00000366286 PPM1EQ8WY54 764 aa11.67□□□□□ -0.54
YBX3-203ENST00000366286 TOP1MTQ969P6 601 aa11.67□□□□□ -0.54
YBX3-203ENST00000366286 FAM20AQ96MK3 541 aa11.67□□□□□ -0.54
YBX3-203ENST00000366286 NAP1L4Q99733 375 aaKnown RBP11.67□□□□□ -0.54
YBX3-203ENST00000366286 SEPT9Q9UHD8 586 aaPredicted RBP11.67□□□□□ -0.54
YBX3-203ENST00000366286 MTUS1Q9ULD2 1270 aa11.67□□□□□ -0.54
YBX3-203ENST00000366286 GINS2Q9Y248 185 aa11.67□□□□□ -0.54
YBX3-203ENST00000366286 INSL6Q9Y581 213 aa11.67□□□□□ -0.54
YBX3-203ENST00000366286 SQORQ9Y6N5 450 aa11.67□□□□□ -0.54
YBX3-203ENST00000366286 TMEM150BA6NC51 233 aa11.66□□□□□ -0.54
YBX3-203ENST00000366286 BTBD18B2RXH4 712 aa11.66□□□□□ -0.54
YBX3-203ENST00000366286 EML1O00423 815 aa11.66□□□□□ -0.54
YBX3-203ENST00000366286 WNT7AO00755 349 aa11.66□□□□□ -0.54
YBX3-203ENST00000366286 TBX3O15119 743 aa11.66□□□□□ -0.54
YBX3-203ENST00000366286 VTNP04004 478 aa11.66□□□□□ -0.54
YBX3-203ENST00000366286 GUCY1B3Q02153 619 aa11.66□□□□□ -0.54
YBX3-203ENST00000366286 CCDC85BQ15834 202 aaPredicted RBP11.66□□□□□ -0.54
YBX3-203ENST00000366286 TMEM266Q2M3C6 531 aa11.66□□□□□ -0.54
YBX3-203ENST00000366286 MICALL1Q8N3F8 863 aa11.66□□□□□ -0.54
YBX3-203ENST00000366286 LRRC71Q8N4P6 559 aa11.66□□□□□ -0.54
YBX3-203ENST00000366286 BANK1Q8NDB2 785 aa11.66□□□□□ -0.54
YBX3-203ENST00000366286 TMEM40Q8WWA1 233 aa11.66□□□□□ -0.54
YBX3-203ENST00000366286 HAS1Q92839 578 aa11.66□□□□□ -0.54
YBX3-203ENST00000366286 ZSCAN31Q96LW9 406 aaPredicted RBP11.66□□□□□ -0.54
YBX3-203ENST00000366286 TGS1Q96RS0 853 aaKnown RBP11.66□□□□□ -0.54
YBX3-203ENST00000366286 YME1L1Q96TA2 773 aa11.66□□□□□ -0.54
YBX3-203ENST00000366286 OSMRQ99650 979 aa11.66□□□□□ -0.54
YBX3-203ENST00000366286 LLPHQ9BRT6 129 aaKnown RBP11.66□□□□□ -0.54
YBX3-203ENST00000366286 CDHR5Q9HBB8 845 aa11.66□□□□□ -0.54
YBX3-203ENST00000366286 SH2B1Q9NRF2 756 aaPredicted RBP11.66□□□□□ -0.54
YBX3-203ENST00000366286 NRBP2Q9NSY0 501 aa11.66□□□□□ -0.54
YBX3-203ENST00000366286 PADI3Q9ULW8 664 aa11.66□□□□□ -0.54
YBX3-203ENST00000366286 PRRC2BQ5JSZ5 2229 aaKnown RBP11.66□□□□□ -0.54
YBX3-203ENST00000366286 PLXNA4Q9HCM2 1894 aa11.66□□□□□ -0.54
YBX3-203ENST00000366286 MAGEB2O15479 319 aa11.65□□□□□ -0.54
YBX3-203ENST00000366286 GPR32O75388 356 aa11.65□□□□□ -0.54
YBX3-203ENST00000366286 STBD1O95210 358 aa11.65□□□□□ -0.54
YBX3-203ENST00000366286 ERVK-21P61565 698 aa11.65□□□□□ -0.54
YBX3-203ENST00000366286 GRB10Q13322 594 aa11.65□□□□□ -0.54
YBX3-203ENST00000366286 RABEP1Q15276 862 aa11.65□□□□□ -0.54
YBX3-203ENST00000366286 TARBP2Q15633 366 aaKnown RBP11.65□□□□□ -0.54
YBX3-203ENST00000366286 KIZQ2M2Z5 673 aa11.65□□□□□ -0.54
YBX3-203ENST00000366286 MTERF2Q49AM1 385 aa11.65□□□□□ -0.54
YBX3-203ENST00000366286 EFCAB12Q6NXP0 572 aa11.65□□□□□ -0.54
YBX3-203ENST00000366286 C8orf76Q96K31 380 aa11.65□□□□□ -0.54
YBX3-203ENST00000366286 MAP7D2Q96T17 732 aa11.65□□□□□ -0.54
YBX3-203ENST00000366286 C17orf80Q9BSJ5 609 aa11.65□□□□□ -0.54
YBX3-203ENST00000366286 TMX1Q9H3N1 280 aa11.65□□□□□ -0.54
YBX3-203ENST00000366286 RC3H2Q9HBD1 1191 aaKnown RBP11.65□□□□□ -0.54
YBX3-203ENST00000366286 ERVK-5Q9HDB9 667 aa11.65□□□□□ -0.54
YBX3-203ENST00000366286 PRDM6Q9NQX0 595 aa11.65□□□□□ -0.54
YBX3-203ENST00000366286 AKT3Q9Y243 479 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms