RNA–Protein interactions for RNA: ENST00000359238.6

SNX11-201, Transcript of sorting nexin 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX11, Length 2,315 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-201ENST00000359238 CNPY4Q8N129 248 aa20.43■□□□□ 0.86
SNX11-201ENST00000359238 PIGOQ8TEQ8 1089 aa20.43■□□□□ 0.86
SNX11-201ENST00000359238 RIN2Q8WYP3 895 aaPredicted RBP20.43■□□□□ 0.86
SNX11-201ENST00000359238 TRIM47Q96LD4 638 aa20.43■□□□□ 0.86
SNX11-201ENST00000359238 ZNF408Q9H9D4 720 aa20.43■□□□□ 0.86
SNX11-201ENST00000359238 AGPSO00116 658 aa20.42■□□□□ 0.86
SNX11-201ENST00000359238 RPA1P27694 616 aa20.42■□□□□ 0.86
SNX11-201ENST00000359238 FXR1P51114 621 aaKnown RBP eCLIP20.42■□□□□ 0.86
SNX11-201ENST00000359238 SKIDA1Q1XH10 827 aa20.42■□□□□ 0.86
SNX11-201ENST00000359238 GBP6Q6ZN66 633 aa20.42■□□□□ 0.86
SNX11-201ENST00000359238 PNMA8AQ86V59 439 aaPredicted RBP20.42■□□□□ 0.86
SNX11-201ENST00000359238 RBM46Q8TBY0 533 aaKnown RBP20.42■□□□□ 0.86
SNX11-201ENST00000359238 SLC5A5Q92911 643 aa20.42■□□□□ 0.86
SNX11-201ENST00000359238 P2RX5Q93086 422 aa20.42■□□□□ 0.86
SNX11-201ENST00000359238 RPGRIP1Q96KN7 1286 aa20.42■□□□□ 0.86
SNX11-201ENST00000359238 LIMA1Q9UHB6 759 aaKnown RBP20.42■□□□□ 0.86
SNX11-201ENST00000359238 RPTORQ8N122 1335 aa20.42■□□□□ 0.86
SNX11-201ENST00000359238 GOLGA6CA6NDK9 693 aa20.42■□□□□ 0.86
SNX11-201ENST00000359238 GOLGA6DP0CG33 693 aa20.42■□□□□ 0.86
SNX11-201ENST00000359238 COPB1P53618 953 aaKnown RBP20.42■□□□□ 0.86
SNX11-201ENST00000359238 ERVK-24P63145 666 aa20.42■□□□□ 0.86
SNX11-201ENST00000359238 TMEM132BQ14DG7 1078 aa20.42■□□□□ 0.86
SNX11-201ENST00000359238 SH3D19Q5HYK7 790 aa20.42■□□□□ 0.86
SNX11-201ENST00000359238 SNRNP48Q6IEG0 339 aaKnown RBP20.42■□□□□ 0.86
SNX11-201ENST00000359238 CYP26C1Q6V0L0 522 aa20.42■□□□□ 0.86
SNX11-201ENST00000359238 NT5C3AQ9H0P0 336 aa20.42■□□□□ 0.86
SNX11-201ENST00000359238 UNC45AQ9H3U1 944 aa20.42■□□□□ 0.86
SNX11-201ENST00000359238 GOLGA6AQ9NYA3 693 aa20.42■□□□□ 0.86
SNX11-201ENST00000359238 ZNF214Q9UL59 606 aaPredicted RBP20.42■□□□□ 0.86
SNX11-201ENST00000359238 KDM3AQ9Y4C1 1321 aa20.42■□□□□ 0.86
SNX11-201ENST00000359238 DOCK5Q9H7D0 1870 aa20.41■□□□□ 0.86
SNX11-201ENST00000359238 SPDYE16A6NNV3 312 aaPredicted RBP20.41■□□□□ 0.86
SNX11-201ENST00000359238 RSPH10B2B2RC85 870 aa20.41■□□□□ 0.86
SNX11-201ENST00000359238 PSMA7O14818 248 aa20.41■□□□□ 0.86
SNX11-201ENST00000359238 RSPH10BP0C881 870 aa20.41■□□□□ 0.86
SNX11-201ENST00000359238 FBXW10Q5XX13 1052 aa20.41■□□□□ 0.86
SNX11-201ENST00000359238 NSMFQ6X4W1 530 aa20.41■□□□□ 0.86
SNX11-201ENST00000359238 GADL1Q6ZQY3 521 aa20.41■□□□□ 0.86
SNX11-201ENST00000359238 DYDC2Q96IM9 177 aa20.41■□□□□ 0.86
SNX11-201ENST00000359238 RNF216Q9NWF9 866 aaPredicted RBP20.41■□□□□ 0.86
SNX11-201ENST00000359238 PCDHA2Q9Y5H9 948 aa20.41■□□□□ 0.86
SNX11-201ENST00000359238 CENPFP49454 3210 aa20.41■□□□□ 0.86
SNX11-201ENST00000359238 SCN4AP35499 1836 aa20.41■□□□□ 0.86
SNX11-201ENST00000359238 ATXN2Q99700 1313 aaKnown RBP20.41■□□□□ 0.86
SNX11-201ENST00000359238 LCTP09848 1927 aa20.41■□□□□ 0.86
SNX11-201ENST00000359238 LRRC10BA6NIK2 292 aa20.41■□□□□ 0.86
SNX11-201ENST00000359238 SLITRK3O94933 977 aa20.41■□□□□ 0.86
SNX11-201ENST00000359238 CCNE1P24864 410 aa20.41■□□□□ 0.86
SNX11-201ENST00000359238 CASP5P51878 434 aa20.41■□□□□ 0.86
SNX11-201ENST00000359238 PLS1Q14651 629 aa20.41■□□□□ 0.86
SNX11-201ENST00000359238 HSD17B14Q9BPX1 270 aa20.41■□□□□ 0.86
SNX11-201ENST00000359238 ZNF577Q9BSK1 485 aa20.41■□□□□ 0.86
SNX11-201ENST00000359238 A1CFQ9NQ94 594 aaKnown RBP20.41■□□□□ 0.86
SNX11-201ENST00000359238 RNF146Q9NTX7 359 aa20.41■□□□□ 0.86
SNX11-201ENST00000359238 PVALEFA0A1B0GWK0 134 aa20.4■□□□□ 0.86
SNX11-201ENST00000359238 EIF3HO15372 352 aaKnown RBP eCLIP20.4■□□□□ 0.86
SNX11-201ENST00000359238 CNNM4Q6P4Q7 775 aa20.4■□□□□ 0.86
SNX11-201ENST00000359238 MCF2L2Q86YR7 1114 aa20.4■□□□□ 0.86
SNX11-201ENST00000359238 CSGALNACT2Q8N6G5 542 aa20.4■□□□□ 0.86
SNX11-201ENST00000359238 MXRA8Q9BRK3 442 aa20.4■□□□□ 0.86
SNX11-201ENST00000359238 RUSC1Q9BVN2 902 aa20.4■□□□□ 0.86
SNX11-201ENST00000359238 CAPS2Q9BXY5 557 aa20.4■□□□□ 0.86
SNX11-201ENST00000359238 R3HDMLQ9H3Y0 253 aa20.4■□□□□ 0.86
SNX11-201ENST00000359238 KCNH7Q9NS40 1196 aa20.4■□□□□ 0.86
SNX11-201ENST00000359238 PANK4Q9NVE7 773 aa20.4■□□□□ 0.86
SNX11-201ENST00000359238 ITGB3BPQ13352 177 aaPredicted RBP20.39■□□□□ 0.86
SNX11-201ENST00000359238 ERO1BQ86YB8 467 aa20.39■□□□□ 0.86
SNX11-201ENST00000359238 BCAS4Q8TDM0 211 aa20.39■□□□□ 0.86
SNX11-201ENST00000359238 DHTKD1Q96HY7 919 aaPredicted RBP20.39■□□□□ 0.86
SNX11-201ENST00000359238 BHMT2Q9H2M3 363 aa20.39■□□□□ 0.86
SNX11-201ENST00000359238 ABHD10Q9NUJ1 306 aa20.39■□□□□ 0.86
SNX11-201ENST00000359238 ADAMTS5Q9UNA0 930 aa20.39■□□□□ 0.86
SNX11-201ENST00000359238 N4BP3O15049 544 aa20.39■□□□□ 0.85
SNX11-201ENST00000359238 PPATQ06203 517 aa20.39■□□□□ 0.85
SNX11-201ENST00000359238 BAATQ14032 418 aaPredicted RBP20.39■□□□□ 0.85
SNX11-201ENST00000359238 TACO1Q9BSH4 297 aaKnown RBP20.39■□□□□ 0.85
SNX11-201ENST00000359238 SELENOOQ9BVL4 669 aa20.39■□□□□ 0.85
SNX11-201ENST00000359238 EHMT1Q9H9B1 1298 aa20.39■□□□□ 0.85
SNX11-201ENST00000359238 TELO2Q9Y4R8 837 aa20.39■□□□□ 0.85
SNX11-201ENST00000359238 KIAA1217Q5T5P2 1943 aa20.39■□□□□ 0.85
SNX11-201ENST00000359238 SPDYE5A6NIY4 337 aa20.38■□□□□ 0.85
SNX11-201ENST00000359238 IPO5O00410 1097 aaKnown RBP20.38■□□□□ 0.85
SNX11-201ENST00000359238 GAS7O60861 476 aa20.38■□□□□ 0.85
SNX11-201ENST00000359238 ATP9AO75110 1047 aa20.38■□□□□ 0.85
SNX11-201ENST00000359238 FDX1P10109 184 aa20.38■□□□□ 0.85
SNX11-201ENST00000359238 GHRHRQ02643 423 aa20.38■□□□□ 0.85
SNX11-201ENST00000359238 HAUS3Q68CZ6 603 aa20.38■□□□□ 0.85
SNX11-201ENST00000359238 CENPPQ6IPU0 288 aa20.38■□□□□ 0.85
SNX11-201ENST00000359238 B3GNT9Q6UX72 402 aa20.38■□□□□ 0.85
SNX11-201ENST00000359238 CCNI2Q6ZMN8 369 aaPredicted RBP20.38■□□□□ 0.85
SNX11-201ENST00000359238 TPH2Q8IWU9 490 aa20.38■□□□□ 0.85
SNX11-201ENST00000359238 OPTNQ96CV9 577 aa20.38■□□□□ 0.85
SNX11-201ENST00000359238 MMS19Q96T76 1030 aa20.38■□□□□ 0.85
SNX11-201ENST00000359238 REEP2Q9BRK0 252 aa20.38■□□□□ 0.85
SNX11-201ENST00000359238 GRIN2DO15399 1336 aa20.38■□□□□ 0.85
SNX11-201ENST00000359238 GOLGA6BA6NDN3 693 aa20.38■□□□□ 0.85
SNX11-201ENST00000359238 SFI1A8K8P3 1242 aa20.38■□□□□ 0.85
SNX11-201ENST00000359238 DHX15O43143 795 aaKnown RBP20.38■□□□□ 0.85
SNX11-201ENST00000359238 SETQ01105 290 aaPredicted RBP20.38■□□□□ 0.85
SNX11-201ENST00000359238 CKAP4Q07065 602 aaKnown RBP20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms