RNA–Protein interactions for RNA: ENST00000308537.4

PDZRN3-202, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best) BASIC

Gene PDZRN3, Length 1,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-202ENST00000308537 ORC3Q9UBD5 711 aaPredicted RBP22.43■■□□□ 1.18
PDZRN3-202ENST00000308537 GABBR1Q9UBS5 961 aa22.43■■□□□ 1.18
PDZRN3-202ENST00000308537 WDR64B1ANS9 1081 aa22.42■■□□□ 1.18
PDZRN3-202ENST00000308537 STBD1O95210 358 aa22.42■■□□□ 1.18
PDZRN3-202ENST00000308537 PSAPP07602 524 aa22.42■■□□□ 1.18
PDZRN3-202ENST00000308537 LINC00271P0C7V0 271 aa22.42■■□□□ 1.18
PDZRN3-202ENST00000308537 IGFBP4P22692 258 aa22.42■■□□□ 1.18
PDZRN3-202ENST00000308537 CD52P31358 61 aa22.42■■□□□ 1.18
PDZRN3-202ENST00000308537 GRB10Q13322 594 aa22.42■■□□□ 1.18
PDZRN3-202ENST00000308537 NONOQ15233 471 aaKnown RBP eCLIP22.42■■□□□ 1.18
PDZRN3-202ENST00000308537 ZNF484Q5JVG2 852 aa22.42■■□□□ 1.18
PDZRN3-202ENST00000308537 KRT25Q7Z3Z0 450 aa22.42■■□□□ 1.18
PDZRN3-202ENST00000308537 CDHR5Q9HBB8 845 aa22.42■■□□□ 1.18
PDZRN3-202ENST00000308537 INSL6Q9Y581 213 aa22.42■■□□□ 1.18
PDZRN3-202ENST00000308537 TRPV2Q9Y5S1 764 aa22.42■■□□□ 1.18
PDZRN3-202ENST00000308537 MYO7AQ13402 2215 aa22.42■■□□□ 1.18
PDZRN3-202ENST00000308537 FAM205CA6NFA0 338 aa22.41■■□□□ 1.18
PDZRN3-202ENST00000308537 ENPP3O14638 875 aa22.41■■□□□ 1.18
PDZRN3-202ENST00000308537 JAK2O60674 1132 aa22.41■■□□□ 1.18
PDZRN3-202ENST00000308537 GAS7O60861 476 aa22.41■■□□□ 1.18
PDZRN3-202ENST00000308537 LRCH2Q5VUJ6 765 aa22.41■■□□□ 1.18
PDZRN3-202ENST00000308537 TMEM40Q8WWA1 233 aa22.41■■□□□ 1.18
PDZRN3-202ENST00000308537 CEP89Q96ST8 783 aa22.41■■□□□ 1.18
PDZRN3-202ENST00000308537 COL25A1Q9BXS0 654 aaPredicted RBP22.41■■□□□ 1.18
PDZRN3-202ENST00000308537 CELF4Q9BZC1 486 aaKnown RBP22.41■■□□□ 1.18
PDZRN3-202ENST00000308537 SUGCTQ9HAC7 445 aa22.41■■□□□ 1.18
PDZRN3-202ENST00000308537 KCNMB3Q9NPA1 279 aa22.41■■□□□ 1.18
PDZRN3-202ENST00000308537 RALGAPA2Q2PPJ7 1873 aa22.41■■□□□ 1.18
PDZRN3-202ENST00000308537 ATG2AQ2TAZ0 1938 aa22.4■■□□□ 1.18
PDZRN3-202ENST00000308537 DLL1O00548 723 aa22.4■■□□□ 1.18
PDZRN3-202ENST00000308537 IER5Q5VY09 327 aa22.4■■□□□ 1.18
PDZRN3-202ENST00000308537 NME8Q8N427 588 aa22.4■■□□□ 1.18
PDZRN3-202ENST00000308537 TEKT3Q9BXF9 490 aa22.4■■□□□ 1.18
PDZRN3-202ENST00000308537 TMX1Q9H3N1 280 aa22.4■■□□□ 1.18
PDZRN3-202ENST00000308537 CCDC85BQ15834 202 aaPredicted RBP22.39■■□□□ 1.17
PDZRN3-202ENST00000308537 PPP4R3AQ6IN85 833 aa22.39■■□□□ 1.17
PDZRN3-202ENST00000308537 PPM1EQ8WY54 764 aa22.39■■□□□ 1.17
PDZRN3-202ENST00000308537 TGS1Q96RS0 853 aaKnown RBP22.39■■□□□ 1.17
PDZRN3-202ENST00000308537 C17orf80Q9BSJ5 609 aa22.39■■□□□ 1.17
PDZRN3-202ENST00000308537 VAV3Q9UKW4 847 aa22.39■■□□□ 1.17
PDZRN3-202ENST00000308537 PADI3Q9ULW8 664 aa22.39■■□□□ 1.17
PDZRN3-202ENST00000308537 CHMP2AO43633 222 aa22.38■■□□□ 1.17
PDZRN3-202ENST00000308537 EIF5BO60841 1220 aaKnown RBP22.38■■□□□ 1.17
PDZRN3-202ENST00000308537 UPP2O95045 317 aa22.38■■□□□ 1.17
PDZRN3-202ENST00000308537 OATP04181 439 aa22.38■■□□□ 1.17
PDZRN3-202ENST00000308537 SFNP31947 248 aa22.38■■□□□ 1.17
PDZRN3-202ENST00000308537 JAK3P52333 1124 aa22.38■■□□□ 1.17
PDZRN3-202ENST00000308537 PRKCEQ02156 737 aa22.38■■□□□ 1.17
PDZRN3-202ENST00000308537 NR5A1Q13285 461 aa22.38■■□□□ 1.17
PDZRN3-202ENST00000308537 TARBP2Q15633 366 aaKnown RBP22.38■■□□□ 1.17
PDZRN3-202ENST00000308537 RDM1Q8NG50 284 aa22.38■■□□□ 1.17
PDZRN3-202ENST00000308537 GDPD5Q8WTR4 605 aa22.38■■□□□ 1.17
PDZRN3-202ENST00000308537 HAS1Q92839 578 aa22.38■■□□□ 1.17
PDZRN3-202ENST00000308537 DDX25Q9UHL0 483 aaKnown RBP22.38■■□□□ 1.17
PDZRN3-202ENST00000308537 KIAA1671Q9BY89 1806 aa22.37■■□□□ 1.17
PDZRN3-202ENST00000308537 EML1O00423 815 aa22.37■■□□□ 1.17
PDZRN3-202ENST00000308537 GPR32O75388 356 aa22.37■■□□□ 1.17
PDZRN3-202ENST00000308537 LETM2Q2VYF4 491 aa22.37■■□□□ 1.17
PDZRN3-202ENST00000308537 PIK3AP1Q6ZUJ8 805 aa22.37■■□□□ 1.17
PDZRN3-202ENST00000308537 TRMT1LQ7Z2T5 733 aaKnown RBP22.37■■□□□ 1.17
PDZRN3-202ENST00000308537 NEK8Q86SG6 692 aa22.37■■□□□ 1.17
PDZRN3-202ENST00000308537 ZNF689Q96CS4 500 aaPredicted RBP22.37■■□□□ 1.17
PDZRN3-202ENST00000308537 FAM167AQ96KS9 214 aa22.37■■□□□ 1.17
PDZRN3-202ENST00000308537 ERVK-5Q9HDB9 667 aa22.37■■□□□ 1.17
PDZRN3-202ENST00000308537 MTUS1Q9ULD2 1270 aa22.37■■□□□ 1.17
PDZRN3-202ENST00000308537 NOC2LQ9Y3T9 749 aaKnown RBP22.37■■□□□ 1.17
PDZRN3-202ENST00000308537 SAMM50Q9Y512 469 aa22.37■■□□□ 1.17
PDZRN3-202ENST00000308537 CCDC194A0A1B0GVG4 234 aa22.36■■□□□ 1.17
PDZRN3-202ENST00000308537 WNT7AO00755 349 aa22.36■■□□□ 1.17
PDZRN3-202ENST00000308537 TMEM266Q2M3C6 531 aa22.36■■□□□ 1.17
PDZRN3-202ENST00000308537 CKAP2LQ8IYA6 745 aa22.36■■□□□ 1.17
PDZRN3-202ENST00000308537 TSPYL2Q9H2G4 693 aaPredicted RBP22.36■■□□□ 1.17
PDZRN3-202ENST00000308537 TMEM150BA6NC51 233 aa22.35■■□□□ 1.17
PDZRN3-202ENST00000308537 MGEA5O60502 916 aa22.35■■□□□ 1.17
PDZRN3-202ENST00000308537 XBP1P17861 261 aa22.35■■□□□ 1.17
PDZRN3-202ENST00000308537 CLCN3P51790 818 aa22.35■■□□□ 1.17
PDZRN3-202ENST00000308537 SPIRE1Q08AE8 756 aa22.35■■□□□ 1.17
PDZRN3-202ENST00000308537 PPP2R5CQ13362 524 aa22.35■■□□□ 1.17
PDZRN3-202ENST00000308537 MIER3Q7Z3K6 550 aa22.35■■□□□ 1.17
PDZRN3-202ENST00000308537 WASF1Q92558 559 aa22.35■■□□□ 1.17
PDZRN3-202ENST00000308537 YME1L1Q96TA2 773 aa22.35■■□□□ 1.17
PDZRN3-202ENST00000308537 TCEAL9Q9UHQ7 104 aa22.35■■□□□ 1.17
PDZRN3-202ENST00000308537 CEP131Q9UPN4 1083 aa22.35■■□□□ 1.17
PDZRN3-202ENST00000308537 MMP1P03956 469 aa22.34■■□□□ 1.17
PDZRN3-202ENST00000308537 VTNP04004 478 aa22.34■■□□□ 1.17
PDZRN3-202ENST00000308537 GCFC2P16383 781 aaKnown RBP22.34■■□□□ 1.17
PDZRN3-202ENST00000308537 KIZQ2M2Z5 673 aa22.34■■□□□ 1.17
PDZRN3-202ENST00000308537 FAM228AQ86W67 206 aa22.34■■□□□ 1.17
PDZRN3-202ENST00000308537 POTEDQ86YR6 584 aa22.34■■□□□ 1.17
PDZRN3-202ENST00000308537 FTHL17Q9BXU8 183 aa22.34■■□□□ 1.17
PDZRN3-202ENST00000308537 NIFKQ9BYG3 293 aaKnown RBP22.34■■□□□ 1.17
PDZRN3-202ENST00000308537 ADAMTS10Q9H324 1103 aa22.34■■□□□ 1.17
PDZRN3-202ENST00000308537 LMCD1Q9NZU5 365 aa22.34■■□□□ 1.17
PDZRN3-202ENST00000308537 WRAP73Q9P2S5 460 aaPredicted RBP22.34■■□□□ 1.17
PDZRN3-202ENST00000308537 FNDC1Q4ZHG4 1894 aaPredicted RBP22.34■■□□□ 1.17
PDZRN3-202ENST00000308537 IGKV6-21A0A0C4DH24 114 aa22.33■■□□□ 1.17
PDZRN3-202ENST00000308537 BTBD18B2RXH4 712 aa22.33■■□□□ 1.17
PDZRN3-202ENST00000308537 M0QZ92 97 aa22.33■■□□□ 1.17
PDZRN3-202ENST00000308537 MAGEB2O15479 319 aa22.33■■□□□ 1.17
PDZRN3-202ENST00000308537 DGKIO75912 1065 aa22.33■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms