RNA–Protein interactions for RNA: ENST00000641756.1

PHGDH-226, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,132 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-226ENST00000641756 TKFCQ3LXA3 575 aa19.67■□□□□ 0.74
PHGDH-226ENST00000641756 DCAF15Q66K64 600 aa19.67■□□□□ 0.74
PHGDH-226ENST00000641756 RSRC2Q7L4I2 434 aaKnown RBP19.67■□□□□ 0.74
PHGDH-226ENST00000641756 KSR1Q8IVT5 923 aa19.67■□□□□ 0.74
PHGDH-226ENST00000641756 SCYL3Q8IZE3 742 aa19.67■□□□□ 0.74
PHGDH-226ENST00000641756 ATG4CQ96DT6 458 aa19.67■□□□□ 0.74
PHGDH-226ENST00000641756 DEF6Q9H4E7 631 aa19.67■□□□□ 0.74
PHGDH-226ENST00000641756 FAM184BQ9ULE4 1060 aa19.67■□□□□ 0.74
PHGDH-226ENST00000641756 DUSP10Q9Y6W6 482 aa19.67■□□□□ 0.74
PHGDH-226ENST00000641756 DOCK1Q14185 1865 aa19.67■□□□□ 0.74
PHGDH-226ENST00000641756 KRT86O43790 486 aa19.67■□□□□ 0.74
PHGDH-226ENST00000641756 ZBED4O75132 1171 aa19.67■□□□□ 0.74
PHGDH-226ENST00000641756 NR3C1P04150 777 aa19.67■□□□□ 0.74
PHGDH-226ENST00000641756 KIF11P52732 1056 aa19.67■□□□□ 0.74
PHGDH-226ENST00000641756 POLR2FP61218 127 aaKnown RBP19.67■□□□□ 0.74
PHGDH-226ENST00000641756 ITGB3BPQ13352 177 aaPredicted RBP19.67■□□□□ 0.74
PHGDH-226ENST00000641756 SPA17Q15506 151 aa19.67■□□□□ 0.74
PHGDH-226ENST00000641756 TRPM4Q8TD43 1214 aa19.67■□□□□ 0.74
PHGDH-226ENST00000641756 FBXO41Q8TF61 875 aa19.67■□□□□ 0.74
PHGDH-226ENST00000641756 TRERF1Q96PN7 1200 aa19.67■□□□□ 0.74
PHGDH-226ENST00000641756 PARVGQ9HBI0 331 aa19.67■□□□□ 0.74
PHGDH-226ENST00000641756 CEP72Q9P209 647 aa19.67■□□□□ 0.74
PHGDH-226ENST00000641756 UBIAD1Q9Y5Z9 338 aa19.67■□□□□ 0.74
PHGDH-226ENST00000641756 ENC1O14682 589 aa19.66■□□□□ 0.74
PHGDH-226ENST00000641756 AKAP3O75969 853 aa19.66■□□□□ 0.74
PHGDH-226ENST00000641756 BCRP11274 1271 aa19.66■□□□□ 0.74
PHGDH-226ENST00000641756 MYCLP12524 364 aaPredicted RBP19.66■□□□□ 0.74
PHGDH-226ENST00000641756 CASP4P49662 377 aa19.66■□□□□ 0.74
PHGDH-226ENST00000641756 USP14P54578 494 aa19.66■□□□□ 0.74
PHGDH-226ENST00000641756 BACE1P56817 501 aa19.66■□□□□ 0.74
PHGDH-226ENST00000641756 PCNX4Q63HM2 1172 aa19.66■□□□□ 0.74
PHGDH-226ENST00000641756 AGO4Q9HCK5 861 aaKnown RBP19.66■□□□□ 0.74
PHGDH-226ENST00000641756 ARMCX3Q9UH62 379 aaPredicted RBP19.66■□□□□ 0.74
PHGDH-226ENST00000641756 DHX15O43143 795 aaKnown RBP19.66■□□□□ 0.74
PHGDH-226ENST00000641756 MUTP22033 750 aa19.66■□□□□ 0.74
PHGDH-226ENST00000641756 CLCN6P51797 869 aa19.66■□□□□ 0.74
PHGDH-226ENST00000641756 VAV2P52735 878 aa19.66■□□□□ 0.74
PHGDH-226ENST00000641756 CBX1P83916 185 aa19.66■□□□□ 0.74
PHGDH-226ENST00000641756 GHRHRQ02643 423 aa19.66■□□□□ 0.74
PHGDH-226ENST00000641756 NSMFQ6X4W1 530 aa19.66■□□□□ 0.74
PHGDH-226ENST00000641756 ZNF662Q6ZS27 426 aa19.66■□□□□ 0.74
PHGDH-226ENST00000641756 SRGAP1Q7Z6B7 1085 aa19.66■□□□□ 0.74
PHGDH-226ENST00000641756 FRMD5Q7Z6J6 570 aa19.66■□□□□ 0.74
PHGDH-226ENST00000641756 CCDC125Q86Z20 511 aa19.66■□□□□ 0.74
PHGDH-226ENST00000641756 GOLGA1Q92805 767 aa19.66■□□□□ 0.74
PHGDH-226ENST00000641756 EDEM3Q9BZQ6 932 aa19.66■□□□□ 0.74
PHGDH-226ENST00000641756 ZMYM2Q9UBW7 1377 aa19.65■□□□□ 0.74
PHGDH-226ENST00000641756 MACROD2A1Z1Q3 448 aa19.65■□□□□ 0.74
PHGDH-226ENST00000641756 ARHGEF35A5YM69 484 aa19.65■□□□□ 0.74
PHGDH-226ENST00000641756 VWA5AO00534 786 aa19.65■□□□□ 0.74
PHGDH-226ENST00000641756 TGFB1I1O43294 461 aa19.65■□□□□ 0.74
PHGDH-226ENST00000641756 AKR1B10O60218 316 aa19.65■□□□□ 0.74
PHGDH-226ENST00000641756 PTPRAP18433 802 aa19.65■□□□□ 0.74
PHGDH-226ENST00000641756 CHMP4BP1P59074 171 aa19.65■□□□□ 0.74
PHGDH-226ENST00000641756 MTMR1Q13613 665 aa19.65■□□□□ 0.74
PHGDH-226ENST00000641756 PGM5Q15124 567 aa19.65■□□□□ 0.74
PHGDH-226ENST00000641756 DCAF17Q5H9S7 520 aaPredicted RBP19.65■□□□□ 0.74
PHGDH-226ENST00000641756 JADE2Q9NQC1 790 aa19.65■□□□□ 0.74
PHGDH-226ENST00000641756 PICK1Q9NRD5 415 aa19.65■□□□□ 0.74
PHGDH-226ENST00000641756 HDAC6Q9UBN7 1215 aa19.65■□□□□ 0.74
PHGDH-226ENST00000641756 SAMM50Q9Y512 469 aa19.65■□□□□ 0.74
PHGDH-226ENST00000641756 RIPK3Q9Y572 518 aa19.65■□□□□ 0.74
PHGDH-226ENST00000641756 HMGCS2P54868 508 aa19.64■□□□□ 0.74
PHGDH-226ENST00000641756 AMPD2Q01433 879 aa19.64■□□□□ 0.74
PHGDH-226ENST00000641756 RNF207Q6ZRF8 634 aa19.64■□□□□ 0.74
PHGDH-226ENST00000641756 MAEAQ7L5Y9 396 aa19.64■□□□□ 0.74
PHGDH-226ENST00000641756 CEP112Q8N8E3 955 aa19.64■□□□□ 0.74
PHGDH-226ENST00000641756 ZNF280CQ8ND82 737 aa19.64■□□□□ 0.74
PHGDH-226ENST00000641756 FIZ1Q96SL8 496 aa19.64■□□□□ 0.74
PHGDH-226ENST00000641756 IFIH1Q9BYX4 1025 aaKnown RBP19.64■□□□□ 0.74
PHGDH-226ENST00000641756 ZNF446Q9NWS9 450 aa19.64■□□□□ 0.74
PHGDH-226ENST00000641756 ZNF112Q9UJU3 913 aa19.64■□□□□ 0.74
PHGDH-226ENST00000641756 PCDHA13Q9Y5I0 950 aa19.64■□□□□ 0.74
PHGDH-226ENST00000641756 ATP1A1P05023 1023 aaKnown RBP19.64■□□□□ 0.73
PHGDH-226ENST00000641756 ACTN1P12814 892 aa19.64■□□□□ 0.73
PHGDH-226ENST00000641756 RPL13P26373 211 aaKnown RBP19.64■□□□□ 0.73
PHGDH-226ENST00000641756 KIF5AQ12840 1032 aa19.64■□□□□ 0.73
PHGDH-226ENST00000641756 COG2Q14746 738 aa19.64■□□□□ 0.73
PHGDH-226ENST00000641756 TDRD12Q587J7 1177 aaKnown RBP19.64■□□□□ 0.73
PHGDH-226ENST00000641756 SFMBT2Q5VUG0 894 aa19.64■□□□□ 0.73
PHGDH-226ENST00000641756 HGSNATQ68CP4 663 aa19.64■□□□□ 0.73
PHGDH-226ENST00000641756 NIPA1Q7RTP0 329 aa19.64■□□□□ 0.73
PHGDH-226ENST00000641756 AS3MTQ9HBK9 375 aa19.64■□□□□ 0.73
PHGDH-226ENST00000641756 MYO6Q9UM54 1294 aa19.64■□□□□ 0.73
PHGDH-226ENST00000641756 PCDHB13Q9Y5F0 798 aa19.64■□□□□ 0.73
PHGDH-226ENST00000641756 ZHX2Q9Y6X8 837 aa19.64■□□□□ 0.73
PHGDH-226ENST00000641756 EIF3DO15371 548 aaKnown RBP eCLIP19.63■□□□□ 0.73
PHGDH-226ENST00000641756 TLR2O60603 784 aa19.63■□□□□ 0.73
PHGDH-226ENST00000641756 HIP1RO75146 1068 aa19.63■□□□□ 0.73
PHGDH-226ENST00000641756 AFPP02771 609 aaKnown RBP19.63■□□□□ 0.73
PHGDH-226ENST00000641756 EPB41P11171 864 aaKnown RBP19.63■□□□□ 0.73
PHGDH-226ENST00000641756 XRCC5P13010 732 aaKnown RBP19.63■□□□□ 0.73
PHGDH-226ENST00000641756 ZSCAN20P17040 1043 aaPredicted RBP19.63■□□□□ 0.73
PHGDH-226ENST00000641756 ZNF131P52739 623 aa19.63■□□□□ 0.73
PHGDH-226ENST00000641756 GFPT1Q06210 699 aaPredicted RBP19.63■□□□□ 0.73
PHGDH-226ENST00000641756 TUBB2AQ13885 445 aa19.63■□□□□ 0.73
PHGDH-226ENST00000641756 ODR4Q5SWX8 454 aa19.63■□□□□ 0.73
PHGDH-226ENST00000641756 TCERG1LQ5VWI1 586 aa19.63■□□□□ 0.73
PHGDH-226ENST00000641756 FAM178BQ8IXR5 827 aa19.63■□□□□ 0.73
PHGDH-226ENST00000641756 RMDN3Q96TC7 470 aa19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms