RNA–Protein interactions for RNA: ENST00000617998.4

POLR2A-209, Transcript of RNA polymerase II subunit A, humanhuman

TSL 1 (best)

Gene POLR2A, Length 6,751 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2A-209ENST00000617998 IRF6O14896 467 aa11.89□□□□□ -0.51
POLR2A-209ENST00000617998 INHAP05111 366 aa11.89□□□□□ -0.51
POLR2A-209ENST00000617998 FAM193AP78312 1265 aa11.89□□□□□ -0.51
POLR2A-209ENST00000617998 PREPLQ4J6C6 727 aaPredicted RBP11.89□□□□□ -0.51
POLR2A-209ENST00000617998 NEDD1Q8NHV4 660 aa11.89□□□□□ -0.51
POLR2A-209ENST00000617998 CCDC26Q8TAB7 109 aa11.89□□□□□ -0.51
POLR2A-209ENST00000617998 APOL5Q9BWW9 433 aa11.89□□□□□ -0.51
POLR2A-209ENST00000617998 JADE2Q9NQC1 790 aa11.89□□□□□ -0.51
POLR2A-209ENST00000617998 IGHDP01880 384 aa11.88□□□□□ -0.51
POLR2A-209ENST00000617998 STARD3Q14849 445 aa11.88□□□□□ -0.51
POLR2A-209ENST00000617998 PPM1LQ5SGD2 360 aa11.88□□□□□ -0.51
POLR2A-209ENST00000617998 SCFD1Q8WVM8 642 aa11.88□□□□□ -0.51
POLR2A-209ENST00000617998 NT5C1BQ96P26 610 aa11.88□□□□□ -0.51
POLR2A-209ENST00000617998 SRPK1Q96SB4 655 aaKnown RBP11.88□□□□□ -0.51
POLR2A-209ENST00000617998 MRPL9Q9BYD2 267 aaKnown RBP11.88□□□□□ -0.51
POLR2A-209ENST00000617998 HIPK3Q9H422 1215 aa11.88□□□□□ -0.51
POLR2A-209ENST00000617998 TUBE1Q9UJT0 475 aa11.88□□□□□ -0.51
POLR2A-209ENST00000617998 TRAK2O60296 914 aa11.88□□□□□ -0.51
POLR2A-209ENST00000617998 IRF1P10914 325 aa11.88□□□□□ -0.51
POLR2A-209ENST00000617998 PDE6CP51160 858 aa11.88□□□□□ -0.51
POLR2A-209ENST00000617998 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.88□□□□□ -0.51
POLR2A-209ENST00000617998 STRBPQ96SI9 672 aaKnown RBP11.88□□□□□ -0.51
POLR2A-209ENST00000617998 P4HBP07237 508 aaKnown RBP11.88□□□□□ -0.51
POLR2A-209ENST00000617998 PARVGQ9HBI0 331 aa11.88□□□□□ -0.51
POLR2A-209ENST00000617998 INCENPQ9NQS7 918 aa11.88□□□□□ -0.51
POLR2A-209ENST00000617998 TACC3Q9Y6A5 838 aa11.88□□□□□ -0.51
POLR2A-209ENST00000617998 ELP1O95163 1332 aa11.88□□□□□ -0.51
POLR2A-209ENST00000617998 APOEP02649 317 aa11.88□□□□□ -0.51
POLR2A-209ENST00000617998 MYL4P12829 197 aa11.88□□□□□ -0.51
POLR2A-209ENST00000617998 CD58P19256 250 aa11.88□□□□□ -0.51
POLR2A-209ENST00000617998 VCAM1P19320 739 aa11.88□□□□□ -0.51
POLR2A-209ENST00000617998 RNF187Q5TA31 235 aaPredicted RBP11.88□□□□□ -0.51
POLR2A-209ENST00000617998 IRAK1BP1Q5VVH5 260 aa11.88□□□□□ -0.51
POLR2A-209ENST00000617998 PLEKHF1Q96S99 279 aa11.88□□□□□ -0.51
POLR2A-209ENST00000617998 THAP12O43422 761 aa11.88□□□□□ -0.51
POLR2A-209ENST00000617998 CUTAO60888 179 aa11.88□□□□□ -0.51
POLR2A-209ENST00000617998 PGK1P00558 417 aa11.88□□□□□ -0.51
POLR2A-209ENST00000617998 EPHB3P54753 998 aa11.88□□□□□ -0.51
POLR2A-209ENST00000617998 PTK2Q05397 1052 aa11.88□□□□□ -0.51
POLR2A-209ENST00000617998 MXD4Q14582 209 aaPredicted RBP11.88□□□□□ -0.51
POLR2A-209ENST00000617998 RWDD4Q6NW29 188 aaKnown RBP11.88□□□□□ -0.51
POLR2A-209ENST00000617998 CTR9Q6PD62 1173 aa11.88□□□□□ -0.51
POLR2A-209ENST00000617998 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.88□□□□□ -0.51
POLR2A-209ENST00000617998 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.88□□□□□ -0.51
POLR2A-209ENST00000617998 AVPR1AP37288 418 aa11.87□□□□□ -0.51
POLR2A-209ENST00000617998 EPHA10Q5JZY3 1008 aa11.87□□□□□ -0.51
POLR2A-209ENST00000617998 RNF26Q9BY78 433 aaPredicted RBP11.87□□□□□ -0.51
POLR2A-209ENST00000617998 CTTNBP2NLQ9P2B4 639 aa11.87□□□□□ -0.51
POLR2A-209ENST00000617998 KCNH3Q9ULD8 1083 aa11.87□□□□□ -0.51
POLR2A-209ENST00000617998 PRR12Q9ULL5 1215 aa11.87□□□□□ -0.51
POLR2A-209ENST00000617998 EIF3JO75822 258 aaKnown RBP11.87□□□□□ -0.51
POLR2A-209ENST00000617998 BPIFB4P59827 614 aa11.87□□□□□ -0.51
POLR2A-209ENST00000617998 HTRA3P83110 453 aa11.87□□□□□ -0.51
POLR2A-209ENST00000617998 NEXMIFQ5QGS0 1516 aa11.87□□□□□ -0.51
POLR2A-209ENST00000617998 LAD1O00515 517 aa11.87□□□□□ -0.51
POLR2A-209ENST00000617998 NDUFS2O75306 463 aa11.87□□□□□ -0.51
POLR2A-209ENST00000617998 EFCAB12Q6NXP0 572 aa11.87□□□□□ -0.51
POLR2A-209ENST00000617998 FBXO33Q7Z6M2 555 aa11.87□□□□□ -0.51
POLR2A-209ENST00000617998 OSBP2Q969R2 916 aa11.87□□□□□ -0.51
POLR2A-209ENST00000617998 TLE6Q9H808 572 aa11.87□□□□□ -0.51
POLR2A-209ENST00000617998 MYO1AQ9UBC5 1043 aa11.87□□□□□ -0.51
POLR2A-209ENST00000617998 CROCC2H7BZ55 1655 aa11.87□□□□□ -0.51
POLR2A-209ENST00000617998 PDIA3P30101 505 aaKnown RBP11.87□□□□□ -0.51
POLR2A-209ENST00000617998 OR6B2Q6IFH4 312 aa11.87□□□□□ -0.51
POLR2A-209ENST00000617998 EHBP1Q8NDI1 1231 aa11.87□□□□□ -0.51
POLR2A-209ENST00000617998 NEK9Q8TD19 979 aa11.87□□□□□ -0.51
POLR2A-209ENST00000617998 HAUS1Q96CS2 278 aa11.87□□□□□ -0.51
POLR2A-209ENST00000617998 STN1Q9H668 368 aaKnown RBP11.87□□□□□ -0.51
POLR2A-209ENST00000617998 AK9Q5TCS8 1911 aa11.87□□□□□ -0.51
POLR2A-209ENST00000617998 PRR23AA6NEV1 266 aa11.87□□□□□ -0.51
POLR2A-209ENST00000617998 ASAP2O43150 1006 aa11.87□□□□□ -0.51
POLR2A-209ENST00000617998 EFNA5P52803 228 aa11.87□□□□□ -0.51
POLR2A-209ENST00000617998 CACNB2Q08289 660 aaPredicted RBP11.87□□□□□ -0.51
POLR2A-209ENST00000617998 PTF1AQ7RTS3 328 aa11.87□□□□□ -0.51
POLR2A-209ENST00000617998 TMC6Q7Z403 805 aa11.87□□□□□ -0.51
POLR2A-209ENST00000617998 BBXQ8WY36 941 aaPredicted RBP11.87□□□□□ -0.51
POLR2A-209ENST00000617998 AGBL1Q96MI9 1066 aa11.87□□□□□ -0.51
POLR2A-209ENST00000617998 ATICP31939 592 aa11.87□□□□□ -0.51
POLR2A-209ENST00000617998 UBASH3AP57075 661 aa11.87□□□□□ -0.51
POLR2A-209ENST00000617998 ALCAMQ13740 583 aa11.87□□□□□ -0.51
POLR2A-209ENST00000617998 NOTUMQ6P988 496 aa11.87□□□□□ -0.51
POLR2A-209ENST00000617998 KANSL3Q9P2N6 904 aa11.87□□□□□ -0.51
POLR2A-209ENST00000617998 ARMCX3Q9UH62 379 aaPredicted RBP11.87□□□□□ -0.51
POLR2A-209ENST00000617998 PPP1R7Q15435 360 aa11.86□□□□□ -0.51
POLR2A-209ENST00000617998 FAM26FQ5R3K3 315 aa11.86□□□□□ -0.51
POLR2A-209ENST00000617998 ANKRD23Q86SG2 305 aa11.86□□□□□ -0.51
POLR2A-209ENST00000617998 SRPRBQ9Y5M8 271 aaKnown RBP11.86□□□□□ -0.51
POLR2A-209ENST00000617998 DDIT3P35638 169 aa11.86□□□□□ -0.51
POLR2A-209ENST00000617998 FPGSQ05932 587 aa11.86□□□□□ -0.51
POLR2A-209ENST00000617998 ATL3Q6DD88 541 aa11.86□□□□□ -0.51
POLR2A-209ENST00000617998 PPP1R18Q6NYC8 613 aa11.86□□□□□ -0.51
POLR2A-209ENST00000617998 NUCKS1Q9H1E3 243 aaKnown RBP11.86□□□□□ -0.51
POLR2A-209ENST00000617998 CPVLQ9H3G5 476 aa11.86□□□□□ -0.51
POLR2A-209ENST00000617998 TJP2Q9UDY2 1190 aa11.86□□□□□ -0.51
POLR2A-209ENST00000617998 TRPM1Q7Z4N2 1603 aa11.86□□□□□ -0.51
POLR2A-209ENST00000617998 ZW10O43264 779 aa11.86□□□□□ -0.51
POLR2A-209ENST00000617998 NLRP11P59045 1033 aaKnown RBP11.86□□□□□ -0.51
POLR2A-209ENST00000617998 CCDC89Q8N998 374 aa11.86□□□□□ -0.51
POLR2A-209ENST00000617998 PPRC1Q5VV67 1664 aaKnown RBP11.86□□□□□ -0.51
POLR2A-209ENST00000617998 CCL5P13501 91 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms