RNA–Protein interactions for RNA: ENST00000613508.4

CBWD1-222, Transcript of COBW domain containing 1, human

TSL 5 BASIC

Gene CBWD1, Length 1,143 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CBWD1-222	ENST00000613508	DGKI	O75912	1065 aa		12.69	□□□□□ -0.38
CBWD1-222	ENST00000613508	CYP3A4	P08684	503 aa		12.69	□□□□□ -0.38
CBWD1-222	ENST00000613508	CDC27	P30260	824 aa		12.69	□□□□□ -0.38
CBWD1-222	ENST00000613508	IGBP1	P78318	339 aa		12.69	□□□□□ -0.38
CBWD1-222	ENST00000613508	PFKFB3	Q16875	520 aa	Predicted RBP	12.69	□□□□□ -0.38
CBWD1-222	ENST00000613508	POTEB	Q6S5H4	581 aa		12.69	□□□□□ -0.38
CBWD1-222	ENST00000613508	ABHD15	Q6UXT9	468 aa		12.69	□□□□□ -0.38
CBWD1-222	ENST00000613508	NME8	Q8N427	588 aa		12.69	□□□□□ -0.38
CBWD1-222	ENST00000613508	LINC01599	Q8WXQ3	324 aa		12.69	□□□□□ -0.38
CBWD1-222	ENST00000613508	TCEANC2	Q96MN5	208 aa		12.69	□□□□□ -0.38
CBWD1-222	ENST00000613508	PLVAP	Q9BX97	442 aa		12.69	□□□□□ -0.38
CBWD1-222	ENST00000613508	NSUN3	Q9H649	340 aa	Known RBP	12.69	□□□□□ -0.38
CBWD1-222	ENST00000613508	TRPC6	Q9Y210	931 aa		12.69	□□□□□ -0.38
CBWD1-222	ENST00000613508	ARIH1	Q9Y4X5	557 aa	Predicted RBP	12.69	□□□□□ -0.38
CBWD1-222	ENST00000613508	NLRC5	Q86WI3	1866 aa		12.68	□□□□□ -0.38
CBWD1-222	ENST00000613508	IGLV3-22	A0A075B6J6	115 aa		12.68	□□□□□ -0.38
CBWD1-222	ENST00000613508	FAM86B1	E9PN63	330 aa		12.68	□□□□□ -0.38
CBWD1-222	ENST00000613508	PI4K2B	G5E9Z4	385 aa		12.68	□□□□□ -0.38
CBWD1-222	ENST00000613508	DHX15	O43143	795 aa	Known RBP	12.68	□□□□□ -0.38
CBWD1-222	ENST00000613508	CCNE2	O96020	404 aa		12.68	□□□□□ -0.38
CBWD1-222	ENST00000613508	FAM86B2	P0C5J1	330 aa		12.68	□□□□□ -0.38
CBWD1-222	ENST00000613508	CD52	P31358	61 aa		12.68	□□□□□ -0.38
CBWD1-222	ENST00000613508	CTNNB1	P35222	781 aa		12.68	□□□□□ -0.38
CBWD1-222	ENST00000613508	CTC1	Q2NKJ3	1217 aa		12.68	□□□□□ -0.38
CBWD1-222	ENST00000613508	NAALADL2	Q58DX5	795 aa		12.68	□□□□□ -0.38
CBWD1-222	ENST00000613508	TCEAL5	Q5H9L2	206 aa		12.68	□□□□□ -0.38
CBWD1-222	ENST00000613508	PTCRA	Q6ISU1	281 aa	Predicted RBP	12.68	□□□□□ -0.38
CBWD1-222	ENST00000613508	RTN4RL1	Q86UN2	441 aa	Predicted RBP	12.68	□□□□□ -0.38
CBWD1-222	ENST00000613508	NPAS4	Q8IUM7	802 aa		12.68	□□□□□ -0.38
CBWD1-222	ENST00000613508	ATP8B4	Q8TF62	1192 aa		12.68	□□□□□ -0.38
CBWD1-222	ENST00000613508	ZBTB10	Q96DT7	871 aa		12.68	□□□□□ -0.38
CBWD1-222	ENST00000613508	PGBD1	Q96JS3	809 aa		12.68	□□□□□ -0.38
CBWD1-222	ENST00000613508	CELF4	Q9BZC1	486 aa	Known RBP	12.68	□□□□□ -0.38
CBWD1-222	ENST00000613508	ZMYND12	Q9H0C1	365 aa		12.68	□□□□□ -0.38
CBWD1-222	ENST00000613508	FAM49A	Q9H0Q0	323 aa	Predicted RBP	12.68	□□□□□ -0.38
CBWD1-222	ENST00000613508	EPHX3	Q9H6B9	360 aa		12.68	□□□□□ -0.38
CBWD1-222	ENST00000613508	CD320	Q9NPF0	282 aa		12.68	□□□□□ -0.38
CBWD1-222	ENST00000613508	TMEM260	Q9NX78	707 aa		12.68	□□□□□ -0.38
CBWD1-222	ENST00000613508	PADI3	Q9ULW8	664 aa		12.68	□□□□□ -0.38
CBWD1-222	ENST00000613508	TRPV2	Q9Y5S1	764 aa		12.68	□□□□□ -0.38
CBWD1-222	ENST00000613508	COL1A2	P08123	1366 aa		12.68	□□□□□ -0.38
CBWD1-222	ENST00000613508		M0QZ92	97 aa		12.67	□□□□□ -0.38
CBWD1-222	ENST00000613508	IPO5	O00410	1097 aa	Known RBP	12.67	□□□□□ -0.38
CBWD1-222	ENST00000613508	HBP1	O60381	514 aa		12.67	□□□□□ -0.38
CBWD1-222	ENST00000613508	GPR37L1	O60883	481 aa		12.67	□□□□□ -0.38
CBWD1-222	ENST00000613508	SCG2	P13521	617 aa		12.67	□□□□□ -0.38
CBWD1-222	ENST00000613508	ADD1	P35611	737 aa	Known RBP	12.67	□□□□□ -0.38
CBWD1-222	ENST00000613508	BTG3	Q14201	252 aa	Predicted RBP	12.67	□□□□□ -0.38
CBWD1-222	ENST00000613508	FAM160B1	Q5W0V3	765 aa		12.67	□□□□□ -0.38
CBWD1-222	ENST00000613508	MTHFD1L	Q6UB35	978 aa		12.67	□□□□□ -0.38
CBWD1-222	ENST00000613508	SKAP1	Q86WV1	359 aa		12.67	□□□□□ -0.38
CBWD1-222	ENST00000613508	CMTR2	Q8IYT2	770 aa	Known RBP	12.67	□□□□□ -0.38
CBWD1-222	ENST00000613508	CCDC12	Q8WUD4	166 aa	Predicted RBP	12.67	□□□□□ -0.38
CBWD1-222	ENST00000613508	TRAPPC12	Q8WVT3	735 aa		12.67	□□□□□ -0.38
CBWD1-222	ENST00000613508	KHSRP	Q92945	711 aa	Known RBP eCLIP	12.67	□□□□□ -0.38
CBWD1-222	ENST00000613508	P2RX5	Q93086	422 aa		12.67	□□□□□ -0.38
CBWD1-222	ENST00000613508	AGXT2	Q9BYV1	514 aa		12.67	□□□□□ -0.38
CBWD1-222	ENST00000613508	PRKAG3	Q9UGI9	489 aa		12.67	□□□□□ -0.38
CBWD1-222	ENST00000613508	ZBTB42	B2RXF5	422 aa		12.66	□□□□□ -0.38
CBWD1-222	ENST00000613508	GRM6	O15303	877 aa		12.66	□□□□□ -0.38
CBWD1-222	ENST00000613508	PRPF3	O43395	683 aa	Known RBP	12.66	□□□□□ -0.38
CBWD1-222	ENST00000613508	MMP1	P03956	469 aa		12.66	□□□□□ -0.38
CBWD1-222	ENST00000613508	HSPA4	P34932	840 aa		12.66	□□□□□ -0.38
CBWD1-222	ENST00000613508	ZNF76	P36508	570 aa		12.66	□□□□□ -0.38
CBWD1-222	ENST00000613508	LTBR	P36941	435 aa		12.66	□□□□□ -0.38
CBWD1-222	ENST00000613508	METAP2	P50579	478 aa	Known RBP eCLIP	12.66	□□□□□ -0.38
CBWD1-222	ENST00000613508	SET	Q01105	290 aa	Predicted RBP	12.66	□□□□□ -0.38
CBWD1-222	ENST00000613508	KRT76	Q01546	638 aa		12.66	□□□□□ -0.38
CBWD1-222	ENST00000613508	PAK2	Q13177	524 aa		12.66	□□□□□ -0.38
CBWD1-222	ENST00000613508	PKN1	Q16512	942 aa		12.66	□□□□□ -0.38
CBWD1-222	ENST00000613508	ZNF484	Q5JVG2	852 aa		12.66	□□□□□ -0.38
CBWD1-222	ENST00000613508	TMEM31	Q5JXX7	168 aa		12.66	□□□□□ -0.38
CBWD1-222	ENST00000613508	PLA2G4D	Q86XP0	818 aa		12.66	□□□□□ -0.38
CBWD1-222	ENST00000613508	CCDC60	Q8IWA6	550 aa	Predicted RBP	12.66	□□□□□ -0.38
CBWD1-222	ENST00000613508	SMAP1	Q8IYB5	467 aa	Predicted RBP	12.66	□□□□□ -0.38
CBWD1-222	ENST00000613508	KIAA0319L	Q8IZA0	1049 aa		12.66	□□□□□ -0.38
CBWD1-222	ENST00000613508	GJD3	Q8N144	294 aa		12.66	□□□□□ -0.38
CBWD1-222	ENST00000613508	REXO1	Q8N1G1	1221 aa	Known RBP	12.66	□□□□□ -0.38
CBWD1-222	ENST00000613508	LRFN3	Q9BTN0	628 aa		12.66	□□□□□ -0.38
CBWD1-222	ENST00000613508	TMX1	Q9H3N1	280 aa		12.66	□□□□□ -0.38
CBWD1-222	ENST00000613508	C11orf16	Q9NQ32	467 aa		12.66	□□□□□ -0.38
CBWD1-222	ENST00000613508	TBC1D22B	Q9NU19	505 aa		12.66	□□□□□ -0.38
CBWD1-222	ENST00000613508	PLAGL2	Q9UPG8	496 aa		12.66	□□□□□ -0.38
CBWD1-222	ENST00000613508	FAM50B	Q9Y247	325 aa		12.66	□□□□□ -0.38
CBWD1-222	ENST00000613508		H3BQ06	376 aa	Predicted RBP	12.65	□□□□□ -0.38
CBWD1-222	ENST00000613508	BACH1	O14867	736 aa		12.65	□□□□□ -0.38
CBWD1-222	ENST00000613508	STAG3L1	P0CL83	205 aa		12.65	□□□□□ -0.38
CBWD1-222	ENST00000613508	IL9	P15248	144 aa		12.65	□□□□□ -0.38
CBWD1-222	ENST00000613508	KCNA4	P22459	653 aa		12.65	□□□□□ -0.38
CBWD1-222	ENST00000613508	KLRC1	P26715	233 aa		12.65	□□□□□ -0.38
CBWD1-222	ENST00000613508	CIITA	P33076	1130 aa		12.65	□□□□□ -0.38
CBWD1-222	ENST00000613508	PLA2G5	P39877	138 aa		12.65	□□□□□ -0.38
CBWD1-222	ENST00000613508	EVC	P57679	992 aa		12.65	□□□□□ -0.38
CBWD1-222	ENST00000613508	TMEM62	Q0P6H9	643 aa		12.65	□□□□□ -0.38
CBWD1-222	ENST00000613508	CAMK1	Q14012	370 aa		12.65	□□□□□ -0.38
CBWD1-222	ENST00000613508	JAKMIP3	Q5VZ66	844 aa		12.65	□□□□□ -0.38
CBWD1-222	ENST00000613508	ZNF746	Q6NUN9	644 aa	Predicted RBP	12.65	□□□□□ -0.38
CBWD1-222	ENST00000613508	MIS18BP1	Q6P0N0	1132 aa		12.65	□□□□□ -0.38
CBWD1-222	ENST00000613508	C6orf50	Q9HD87	102 aa		12.65	□□□□□ -0.38
CBWD1-222	ENST00000613508	ZNF302	Q9NR11	478 aa		12.65	□□□□□ -0.38

Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms