RNA–Protein interactions for RNA: ENST00000584897.5

SMCHD1-211, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,143 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-211ENST00000584897 SHISA5Q8N114 240 aa2.44□□□□□ -2.02
SMCHD1-211ENST00000584897 ZNF513Q8N8E2 541 aaPredicted RBP2.44□□□□□ -2.02
SMCHD1-211ENST00000584897 MARCH10Q8NA82 808 aaPredicted RBP2.44□□□□□ -2.02
SMCHD1-211ENST00000584897 LINC01599Q8WXQ3 324 aa2.44□□□□□ -2.02
SMCHD1-211ENST00000584897 SAMD11Q96NU1 681 aa2.44□□□□□ -2.02
SMCHD1-211ENST00000584897 C14orf93Q9H972 538 aaKnown RBP2.44□□□□□ -2.02
SMCHD1-211ENST00000584897 JADE2Q9NQC1 790 aa2.44□□□□□ -2.02
SMCHD1-211ENST00000584897 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP2.44□□□□□ -2.02
SMCHD1-211ENST00000584897 DICER1Q9UPY3 1922 aaKnown RBP2.44□□□□□ -2.02
SMCHD1-211ENST00000584897 PPIP5K1Q6PFW1 1433 aa2.44□□□□□ -2.02
SMCHD1-211ENST00000584897 CNTNAP1P78357 1384 aa2.44□□□□□ -2.02
SMCHD1-211ENST00000584897 C9orf118A6NHY6 69 aa2.44□□□□□ -2.02
SMCHD1-211ENST00000584897 FADS2P1A8MWK0 482 aa2.44□□□□□ -2.02
SMCHD1-211ENST00000584897 CYP1A1P04798 512 aaPredicted RBP2.44□□□□□ -2.02
SMCHD1-211ENST00000584897 PI3P19957 117 aa2.44□□□□□ -2.02
SMCHD1-211ENST00000584897 GUCY2CP25092 1073 aa2.44□□□□□ -2.02
SMCHD1-211ENST00000584897 CRKP46108 304 aa2.44□□□□□ -2.02
SMCHD1-211ENST00000584897 SLC15A2Q16348 729 aa2.44□□□□□ -2.02
SMCHD1-211ENST00000584897 NKG7Q16617 165 aa2.44□□□□□ -2.02
SMCHD1-211ENST00000584897 FYB2Q5VWT5 728 aa2.44□□□□□ -2.02
SMCHD1-211ENST00000584897 B3GNT8Q7Z7M8 397 aa2.44□□□□□ -2.02
SMCHD1-211ENST00000584897 USHBP1Q8N6Y0 703 aa2.44□□□□□ -2.02
SMCHD1-211ENST00000584897 MORC4Q8TE76 937 aa2.44□□□□□ -2.02
SMCHD1-211ENST00000584897 JDP2Q8WYK2 163 aa2.44□□□□□ -2.02
SMCHD1-211ENST00000584897 SHDQ96IW2 340 aa2.44□□□□□ -2.02
SMCHD1-211ENST00000584897 HDAC8Q9BY41 377 aa2.44□□□□□ -2.02
SMCHD1-211ENST00000584897 RRP7BPQ9NSQ0 103 aa2.44□□□□□ -2.02
SMCHD1-211ENST00000584897 UBP1Q9NZI7 540 aa2.44□□□□□ -2.02
SMCHD1-211ENST00000584897 SUSD2Q9UGT4 822 aa2.44□□□□□ -2.02
SMCHD1-211ENST00000584897 MCM8Q9UJA3 840 aa2.44□□□□□ -2.02
SMCHD1-211ENST00000584897 CD2APQ9Y5K6 639 aa2.44□□□□□ -2.02
SMCHD1-211ENST00000584897 SMG6Q86US8 1419 aaKnown RBP2.43□□□□□ -2.02
SMCHD1-211ENST00000584897 TONSLQ96HA7 1378 aa2.43□□□□□ -2.02
SMCHD1-211ENST00000584897 CYP27B1O15528 508 aa2.43□□□□□ -2.02
SMCHD1-211ENST00000584897 CHGBP05060 677 aa2.43□□□□□ -2.02
SMCHD1-211ENST00000584897 MXRA7P84157 204 aa2.43□□□□□ -2.02
SMCHD1-211ENST00000584897 TCEA2Q15560 299 aa2.43□□□□□ -2.02
SMCHD1-211ENST00000584897 LONRF2Q1L5Z9 754 aa2.43□□□□□ -2.02
SMCHD1-211ENST00000584897 RALGPS1Q5JS13 557 aa2.43□□□□□ -2.02
SMCHD1-211ENST00000584897 RBBP8NLQ8NC74 664 aaPredicted RBP2.43□□□□□ -2.02
SMCHD1-211ENST00000584897 ATG4CQ96DT6 458 aa2.43□□□□□ -2.02
SMCHD1-211ENST00000584897 LCORQ96JN0 433 aaPredicted RBP2.43□□□□□ -2.02
SMCHD1-211ENST00000584897 HOMER2Q9NSB8 354 aa2.43□□□□□ -2.02
SMCHD1-211ENST00000584897 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP2.43□□□□□ -2.02
SMCHD1-211ENST00000584897 KLHL42Q9P2K6 505 aa2.43□□□□□ -2.02
SMCHD1-211ENST00000584897 FTSJ1Q9UET6 329 aa2.43□□□□□ -2.02
SMCHD1-211ENST00000584897 GPR55Q9Y2T6 319 aaPredicted RBP2.43□□□□□ -2.02
SMCHD1-211ENST00000584897 C5P01031 1676 aa2.43□□□□□ -2.02
SMCHD1-211ENST00000584897 ZNF831Q5JPB2 1677 aa2.43□□□□□ -2.02
SMCHD1-211ENST00000584897 ANKRD34BA5PLL1 514 aa2.43□□□□□ -2.02
SMCHD1-211ENST00000584897 NUDT19A8MXV4 375 aa2.43□□□□□ -2.02
SMCHD1-211ENST00000584897 FOXD2O60548 495 aaPredicted RBP2.43□□□□□ -2.02
SMCHD1-211ENST00000584897 SOX5P35711 763 aa2.43□□□□□ -2.02
SMCHD1-211ENST00000584897 ETFBP38117 255 aa2.43□□□□□ -2.02
SMCHD1-211ENST00000584897 SAFB2Q14151 953 aaKnown RBP eCLIP2.43□□□□□ -2.022e-6■■□□□ 12.6
SMCHD1-211ENST00000584897 C21orf62-AS1Q17RA5 79 aa2.43□□□□□ -2.02
SMCHD1-211ENST00000584897 NGEFQ8N5V2 710 aa2.43□□□□□ -2.02
SMCHD1-211ENST00000584897 SMC1BQ8NDV3 1235 aa2.43□□□□□ -2.02
SMCHD1-211ENST00000584897 PTCHD1Q96NR3 888 aa2.43□□□□□ -2.02
SMCHD1-211ENST00000584897 AURKAIP1Q9NWT8 199 aaPredicted RBP2.43□□□□□ -2.02
SMCHD1-211ENST00000584897 SNTG2Q9NY99 539 aa2.43□□□□□ -2.02
SMCHD1-211ENST00000584897 BACE2Q9Y5Z0 518 aa2.43□□□□□ -2.02
SMCHD1-211ENST00000584897 KIAA0232Q92628 1395 aa2.43□□□□□ -2.02
SMCHD1-211ENST00000584897 NPC1L1Q9UHC9 1359 aa2.43□□□□□ -2.02
SMCHD1-211ENST00000584897 TAF1LQ8IZX4 1826 aa2.43□□□□□ -2.02
SMCHD1-211ENST00000584897 FAM86C2PA6NEL3 165 aa2.43□□□□□ -2.02
SMCHD1-211ENST00000584897 FOXN1O15353 648 aa2.43□□□□□ -2.02
SMCHD1-211ENST00000584897 PDPK1O15530 556 aa2.43□□□□□ -2.02
SMCHD1-211ENST00000584897 CD3EP07766 207 aa2.43□□□□□ -2.02
SMCHD1-211ENST00000584897 HSPA8P11142 646 aaKnown RBP2.43□□□□□ -2.02
SMCHD1-211ENST00000584897 VIPR1P32241 457 aa2.43□□□□□ -2.02
SMCHD1-211ENST00000584897 CD96P40200 585 aa2.43□□□□□ -2.02
SMCHD1-211ENST00000584897 SESN2P58004 480 aaPredicted RBP2.43□□□□□ -2.02
SMCHD1-211ENST00000584897 CYP4F22Q6NT55 531 aa2.43□□□□□ -2.02
SMCHD1-211ENST00000584897 SH3TC2Q8TF17 1288 aa2.43□□□□□ -2.02
SMCHD1-211ENST00000584897 CHAC2Q8WUX2 184 aa2.43□□□□□ -2.02
SMCHD1-211ENST00000584897 LOXL4Q96JB6 756 aa2.43□□□□□ -2.02
SMCHD1-211ENST00000584897 PRDM14Q9GZV8 571 aa2.43□□□□□ -2.02
SMCHD1-211ENST00000584897 GFOD1Q9NXC2 390 aa2.43□□□□□ -2.02
SMCHD1-211ENST00000584897 INSRP06213 1382 aa2.42□□□□□ -2.02
SMCHD1-211ENST00000584897 NPHP3-ACAD11A0A0J9YXS1 232 aa2.42□□□□□ -2.02
SMCHD1-211ENST00000584897 MEFVO15553 781 aaPredicted RBP2.42□□□□□ -2.02
SMCHD1-211ENST00000584897 HHEXQ03014 270 aa2.42□□□□□ -2.02
SMCHD1-211ENST00000584897 PPP2R5AQ15172 486 aa2.42□□□□□ -2.02
SMCHD1-211ENST00000584897 OVOS1Q6IE37 1185 aa2.42□□□□□ -2.02
SMCHD1-211ENST00000584897 SPOCD1Q6ZMY3 1216 aa2.42□□□□□ -2.02
SMCHD1-211ENST00000584897 ARHGEF18Q6ZSZ5 1173 aa2.42□□□□□ -2.02
SMCHD1-211ENST00000584897 C16orf86Q6ZW13 317 aa2.42□□□□□ -2.02
SMCHD1-211ENST00000584897 Q96M66 194 aa2.42□□□□□ -2.02
SMCHD1-211ENST00000584897 DNAJC7Q99615 494 aa2.42□□□□□ -2.02
SMCHD1-211ENST00000584897 DPH2Q9BQC3 489 aaPredicted RBP2.42□□□□□ -2.02
SMCHD1-211ENST00000584897 DEF6Q9H4E7 631 aa2.42□□□□□ -2.02
SMCHD1-211ENST00000584897 STK32BQ9NY57 414 aa2.42□□□□□ -2.02
SMCHD1-211ENST00000584897 PPT2Q9UMR5 302 aa2.42□□□□□ -2.02
SMCHD1-211ENST00000584897 RGPD8O14715 1765 aaPredicted RBP2.42□□□□□ -2.02
SMCHD1-211ENST00000584897 RTL1A6NKG5 1358 aa2.42□□□□□ -2.02
SMCHD1-211ENST00000584897 TOGARAM1Q9Y4F4 1720 aa2.42□□□□□ -2.02
SMCHD1-211ENST00000584897 EVC2Q86UK5 1308 aa2.42□□□□□ -2.02
SMCHD1-211ENST00000584897 NPEPPSL1A6NEC2 478 aa2.42□□□□□ -2.02
SMCHD1-211ENST00000584897 TPD52L2O43399 206 aaKnown RBP2.42□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms