RNA–Protein interactions for RNA: ENST00000581265.1

RFFL-209, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 596 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-209ENST00000581265 SLC26A2P50443 739 aa12.11□□□□□ -0.47
RFFL-209ENST00000581265 STAT5BP51692 787 aa12.11□□□□□ -0.47
RFFL-209ENST00000581265 ACTR2P61160 394 aa12.11□□□□□ -0.47
RFFL-209ENST00000581265 IGBP1P78318 339 aa12.11□□□□□ -0.47
RFFL-209ENST00000581265 ZP2Q05996 745 aa12.11□□□□□ -0.47
RFFL-209ENST00000581265 BTG3Q14201 252 aaPredicted RBP12.11□□□□□ -0.47
RFFL-209ENST00000581265 PLCB4Q15147 1175 aa12.11□□□□□ -0.47
RFFL-209ENST00000581265 PKN1Q16512 942 aa12.11□□□□□ -0.47
RFFL-209ENST00000581265 CTC1Q2NKJ3 1217 aa12.11□□□□□ -0.47
RFFL-209ENST00000581265 PPP1R18Q6NYC8 613 aa12.11□□□□□ -0.47
RFFL-209ENST00000581265 DHX32Q7L7V1 743 aaKnown RBP12.11□□□□□ -0.47
RFFL-209ENST00000581265 NME8Q8N427 588 aa12.11□□□□□ -0.47
RFFL-209ENST00000581265 ZNF713Q8N859 430 aaPredicted RBP12.11□□□□□ -0.47
RFFL-209ENST00000581265 PBXIP1Q96AQ6 731 aa12.11□□□□□ -0.47
RFFL-209ENST00000581265 POP1Q99575 1024 aaKnown RBP12.11□□□□□ -0.47
RFFL-209ENST00000581265 SDF4Q9BRK5 362 aa12.11□□□□□ -0.47
RFFL-209ENST00000581265 PLVAPQ9BX97 442 aa12.11□□□□□ -0.47
RFFL-209ENST00000581265 FTHL17Q9BXU8 183 aa12.11□□□□□ -0.47
RFFL-209ENST00000581265 BRPF3Q9ULD4 1205 aa12.11□□□□□ -0.47
RFFL-209ENST00000581265 IGKV6D-21A0A0A0MT36 114 aa12.1□□□□□ -0.47
RFFL-209ENST00000581265 SMIM35A0A1B0GVV1 85 aa12.1□□□□□ -0.47
RFFL-209ENST00000581265 CD52P31358 61 aa12.1□□□□□ -0.47
RFFL-209ENST00000581265 IRS1P35568 1242 aa12.1□□□□□ -0.47
RFFL-209ENST00000581265 LTBRP36941 435 aa12.1□□□□□ -0.47
RFFL-209ENST00000581265 NAPAP54920 295 aa12.1□□□□□ -0.47
RFFL-209ENST00000581265 ITGB3BPQ13352 177 aaPredicted RBP12.1□□□□□ -0.47
RFFL-209ENST00000581265 BMP2KLQ5H9B9 411 aa12.1□□□□□ -0.47
RFFL-209ENST00000581265 ZBTB10Q96DT7 871 aa12.1□□□□□ -0.47
RFFL-209ENST00000581265 CELF4Q9BZC1 486 aaKnown RBP12.1□□□□□ -0.47
RFFL-209ENST00000581265 FAM49AQ9H0Q0 323 aaPredicted RBP12.1□□□□□ -0.47
RFFL-209ENST00000581265 IRF2BPLQ9H1B7 796 aa12.1□□□□□ -0.47
RFFL-209ENST00000581265 GLT8D2Q9H1C3 349 aa12.1□□□□□ -0.47
RFFL-209ENST00000581265 AGO4Q9HCK5 861 aaKnown RBP12.1□□□□□ -0.47
RFFL-209ENST00000581265 BARHL2Q9NY43 387 aa12.1□□□□□ -0.47
RFFL-209ENST00000581265 MUTYHQ9UIF7 546 aa12.1□□□□□ -0.47
RFFL-209ENST00000581265 PADI3Q9ULW8 664 aa12.1□□□□□ -0.47
RFFL-209ENST00000581265 TRPC6Q9Y210 931 aa12.1□□□□□ -0.47
RFFL-209ENST00000581265 CNTNAP5Q8WYK1 1306 aa12.1□□□□□ -0.47
RFFL-209ENST00000581265 IGSF9BQ9UPX0 1349 aa12.1□□□□□ -0.47
RFFL-209ENST00000581265 KDM3AQ9Y4C1 1321 aa12.1□□□□□ -0.47
RFFL-209ENST00000581265 SMCO2A6NFE2 343 aa12.09□□□□□ -0.47
RFFL-209ENST00000581265 C19orf67A6NJJ6 358 aa12.09□□□□□ -0.47
RFFL-209ENST00000581265 M0QZ92 97 aa12.09□□□□□ -0.47
RFFL-209ENST00000581265 STXBP3O00186 592 aa12.09□□□□□ -0.47
RFFL-209ENST00000581265 ZBTB43O43298 467 aa12.09□□□□□ -0.47
RFFL-209ENST00000581265 SREBF1P36956 1147 aa12.09□□□□□ -0.47
RFFL-209ENST00000581265 CLK2P49760 499 aaKnown RBP12.09□□□□□ -0.47
RFFL-209ENST00000581265 ADCY7P51828 1080 aa12.09□□□□□ -0.47
RFFL-209ENST00000581265 RCAN1P53805 252 aa12.09□□□□□ -0.47
RFFL-209ENST00000581265 AP3B2Q13367 1082 aa12.09□□□□□ -0.47
RFFL-209ENST00000581265 CAMK1Q14012 370 aa12.09□□□□□ -0.47
RFFL-209ENST00000581265 RTN1Q16799 776 aa12.09□□□□□ -0.47
RFFL-209ENST00000581265 NAALADL2Q58DX5 795 aa12.09□□□□□ -0.47
RFFL-209ENST00000581265 ABHD15Q6UXT9 468 aa12.09□□□□□ -0.47
RFFL-209ENST00000581265 NIPA1Q7RTP0 329 aa12.09□□□□□ -0.47
RFFL-209ENST00000581265 NPAS4Q8IUM7 802 aa12.09□□□□□ -0.47
RFFL-209ENST00000581265 CMTR2Q8IYT2 770 aaKnown RBP12.09□□□□□ -0.47
RFFL-209ENST00000581265 LINC01599Q8WXQ3 324 aa12.09□□□□□ -0.47
RFFL-209ENST00000581265 ATOH1Q92858 354 aaPredicted RBP12.09□□□□□ -0.47
RFFL-209ENST00000581265 P2RX5Q93086 422 aa12.09□□□□□ -0.47
RFFL-209ENST00000581265 ANO3Q9BYT9 981 aa12.09□□□□□ -0.47
RFFL-209ENST00000581265 FAM217BQ9NTX9 383 aaPredicted RBP12.09□□□□□ -0.47
RFFL-209ENST00000581265 FAM86C1Q9NVL1 165 aa12.09□□□□□ -0.47
RFFL-209ENST00000581265 CLDND1Q9NY35 253 aa12.09□□□□□ -0.47
RFFL-209ENST00000581265 PLAGL2Q9UPG8 496 aa12.09□□□□□ -0.47
RFFL-209ENST00000581265 TRPV2Q9Y5S1 764 aa12.09□□□□□ -0.47
RFFL-209ENST00000581265 HBP1O60381 514 aa12.08□□□□□ -0.48
RFFL-209ENST00000581265 CCNE2O96020 404 aa12.08□□□□□ -0.48
RFFL-209ENST00000581265 MMP1P03956 469 aa12.08□□□□□ -0.48
RFFL-209ENST00000581265 STAG3L1P0CL83 205 aa12.08□□□□□ -0.48
RFFL-209ENST00000581265 KLRC1P26715 233 aa12.08□□□□□ -0.48
RFFL-209ENST00000581265 KRT76Q01546 638 aa12.08□□□□□ -0.48
RFFL-209ENST00000581265 TMEM62Q0P6H9 643 aa12.08□□□□□ -0.48
RFFL-209ENST00000581265 HYAL1Q12794 435 aa12.08□□□□□ -0.48
RFFL-209ENST00000581265 IER5LQ5T953 404 aa12.08□□□□□ -0.48
RFFL-209ENST00000581265 MTHFD1LQ6UB35 978 aa12.08□□□□□ -0.48
RFFL-209ENST00000581265 RASEFQ8IZ41 740 aa12.08□□□□□ -0.48
RFFL-209ENST00000581265 TRAPPC12Q8WVT3 735 aa12.08□□□□□ -0.48
RFFL-209ENST00000581265 CRYGNQ8WXF5 182 aa12.08□□□□□ -0.48
RFFL-209ENST00000581265 EDAQ92838 391 aa12.08□□□□□ -0.48
RFFL-209ENST00000581265 PGBD1Q96JS3 809 aa12.08□□□□□ -0.48
RFFL-209ENST00000581265 ALG13Q9NP73 1137 aaKnown RBP12.08□□□□□ -0.48
RFFL-209ENST00000581265 RALGAPA2Q2PPJ7 1873 aa12.08□□□□□ -0.48
RFFL-209ENST00000581265 NLRC5Q86WI3 1866 aa12.08□□□□□ -0.48
RFFL-209ENST00000581265 TMEM221A6NGB7 291 aa12.07□□□□□ -0.48
RFFL-209ENST00000581265 FAM86B1E9PN63 330 aa12.07□□□□□ -0.48
RFFL-209ENST00000581265 M0R296 226 aa12.07□□□□□ -0.48
RFFL-209ENST00000581265 DHX15O43143 795 aaKnown RBP12.07□□□□□ -0.48
RFFL-209ENST00000581265 CYP3A4P08684 503 aa12.07□□□□□ -0.48
RFFL-209ENST00000581265 HMGB1P09429 215 aaKnown RBP12.07□□□□□ -0.48
RFFL-209ENST00000581265 FAM86B2P0C5J1 330 aa12.07□□□□□ -0.48
RFFL-209ENST00000581265 CDC27P30260 824 aa12.07□□□□□ -0.48
RFFL-209ENST00000581265 ZNF76P36508 570 aa12.07□□□□□ -0.48
RFFL-209ENST00000581265 DLX2Q07687 328 aaPredicted RBP12.07□□□□□ -0.48
RFFL-209ENST00000581265 PAK2Q13177 524 aa12.07□□□□□ -0.48
RFFL-209ENST00000581265 ADAM15Q13444 863 aa12.07□□□□□ -0.48
RFFL-209ENST00000581265 KRT32Q14532 448 aa12.07□□□□□ -0.48
RFFL-209ENST00000581265 SMAD2Q15796 467 aaKnown RBP12.07□□□□□ -0.48
RFFL-209ENST00000581265 ADCK5Q3MIX3 580 aa12.07□□□□□ -0.48
RFFL-209ENST00000581265 HERC4Q5GLZ8 1057 aaPredicted RBP12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms