RNA–Protein interactions for RNA: ENST00000569715.5

PDXDC1-216, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene PDXDC1, Length 3,775 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-216ENST00000569715 SENP7Q9BQF6 1050 aa12.13□□□□□ -0.47
PDXDC1-216ENST00000569715 GTPBP4Q9BZE4 634 aaKnown RBP12.13□□□□□ -0.47
PDXDC1-216ENST00000569715 ZNF862O60290 1169 aa12.13□□□□□ -0.47
PDXDC1-216ENST00000569715 TBCAO75347 108 aaKnown RBP12.13□□□□□ -0.47
PDXDC1-216ENST00000569715 YWHABP31946 246 aaKnown RBP12.13□□□□□ -0.47
PDXDC1-216ENST00000569715 SAPCD2Q86UD0 394 aa12.13□□□□□ -0.47
PDXDC1-216ENST00000569715 CCDC60Q8IWA6 550 aaPredicted RBP12.13□□□□□ -0.47
PDXDC1-216ENST00000569715 PCDHA10Q9Y5I2 948 aa12.13□□□□□ -0.47
PDXDC1-216ENST00000569715 BICDL2A1A5D9 508 aa12.12□□□□□ -0.47
PDXDC1-216ENST00000569715 IGF2BP3O00425 579 aaKnown RBP eCLIP12.12□□□□□ -0.474e-7■■■■□ 22.8
PDXDC1-216ENST00000569715 LYPLA2O95372 231 aa12.12□□□□□ -0.47
PDXDC1-216ENST00000569715 MYBP10242 640 aa12.12□□□□□ -0.47
PDXDC1-216ENST00000569715 RARRES1P49788 294 aa12.12□□□□□ -0.47
PDXDC1-216ENST00000569715 PSMC5P62195 406 aa12.12□□□□□ -0.47
PDXDC1-216ENST00000569715 NR1I3Q14994 352 aa12.12□□□□□ -0.47
PDXDC1-216ENST00000569715 PADI6Q6TGC4 694 aa12.12□□□□□ -0.47
PDXDC1-216ENST00000569715 MAEAQ7L5Y9 396 aa12.12□□□□□ -0.47
PDXDC1-216ENST00000569715 GTF3C2Q8WUA4 911 aaPredicted RBP12.12□□□□□ -0.47
PDXDC1-216ENST00000569715 GABBR1Q9UBS5 961 aa12.12□□□□□ -0.47
PDXDC1-216ENST00000569715 LIMA1Q9UHB6 759 aaKnown RBP12.12□□□□□ -0.47
PDXDC1-216ENST00000569715 PASKQ96RG2 1323 aa12.12□□□□□ -0.47
PDXDC1-216ENST00000569715 PCNTO95613 3336 aa12.12□□□□□ -0.47
PDXDC1-216ENST00000569715 BACH1O14867 736 aa12.12□□□□□ -0.47
PDXDC1-216ENST00000569715 ARIH2O95376 493 aa12.12□□□□□ -0.47
PDXDC1-216ENST00000569715 PPP1R2P41236 205 aa12.12□□□□□ -0.47
PDXDC1-216ENST00000569715 MAPK7Q13164 816 aa12.12□□□□□ -0.47
PDXDC1-216ENST00000569715 ZCWPW2Q504Y3 356 aa12.12□□□□□ -0.47
PDXDC1-216ENST00000569715 FBXO16Q8IX29 292 aaPredicted RBP12.12□□□□□ -0.47
PDXDC1-216ENST00000569715 DAW1Q8N136 415 aa12.12□□□□□ -0.47
PDXDC1-216ENST00000569715 VPS16Q9H269 839 aa12.12□□□□□ -0.47
PDXDC1-216ENST00000569715 THAP9Q9H5L6 903 aa12.12□□□□□ -0.47
PDXDC1-216ENST00000569715 MORF4L1Q9UBU8 362 aa12.12□□□□□ -0.47
PDXDC1-216ENST00000569715 ECM2O94769 699 aaPredicted RBP12.12□□□□□ -0.47
PDXDC1-216ENST00000569715 HOXD13P35453 343 aa12.12□□□□□ -0.47
PDXDC1-216ENST00000569715 NPEPPSP55786 919 aa12.12□□□□□ -0.47
PDXDC1-216ENST00000569715 GOLGA8FQ08AF8 430 aa12.12□□□□□ -0.47
PDXDC1-216ENST00000569715 GOLGA8DPQ0D2H9 430 aa12.12□□□□□ -0.47
PDXDC1-216ENST00000569715 SWSAP1Q6NVH7 229 aa12.12□□□□□ -0.47
PDXDC1-216ENST00000569715 ANO5Q75V66 913 aa12.12□□□□□ -0.47
PDXDC1-216ENST00000569715 C4orf19Q8IY42 314 aa12.12□□□□□ -0.47
PDXDC1-216ENST00000569715 PARK7Q99497 189 aaKnown RBP12.12□□□□□ -0.47
PDXDC1-216ENST00000569715 PYCARDQ9ULZ3 195 aa12.12□□□□□ -0.47
PDXDC1-216ENST00000569715 USO1O60763 962 aaKnown RBP12.11□□□□□ -0.47
PDXDC1-216ENST00000569715 FAM13AO94988 1023 aa12.11□□□□□ -0.47
PDXDC1-216ENST00000569715 COPB1P53618 953 aaKnown RBP12.11□□□□□ -0.47
PDXDC1-216ENST00000569715 TMEM63BQ5T3F8 832 aa12.11□□□□□ -0.47
PDXDC1-216ENST00000569715 ABHD15Q6UXT9 468 aa12.11□□□□□ -0.47
PDXDC1-216ENST00000569715 SMAP1Q8IYB5 467 aaPredicted RBP12.11□□□□□ -0.47
PDXDC1-216ENST00000569715 RDM1Q8NG50 284 aa12.11□□□□□ -0.47
PDXDC1-216ENST00000569715 DBR1Q9UK59 544 aaKnown RBP12.11□□□□□ -0.47
PDXDC1-216ENST00000569715 HIP1RO75146 1068 aa12.11□□□□□ -0.47
PDXDC1-216ENST00000569715 ADORA2AP29274 412 aa12.11□□□□□ -0.47
PDXDC1-216ENST00000569715 GCLCP48506 637 aaPredicted RBP12.11□□□□□ -0.47
PDXDC1-216ENST00000569715 CCNA1P78396 465 aa12.11□□□□□ -0.47
PDXDC1-216ENST00000569715 KCNA1Q09470 495 aa12.11□□□□□ -0.47
PDXDC1-216ENST00000569715 LY6KQ17RY6 165 aa12.11□□□□□ -0.47
PDXDC1-216ENST00000569715 ARMCX5Q6P1M9 558 aa12.11□□□□□ -0.47
PDXDC1-216ENST00000569715 LRRC55Q6ZSA7 311 aa12.11□□□□□ -0.47
PDXDC1-216ENST00000569715 EPM2AIP1Q7L775 607 aaPredicted RBP12.11□□□□□ -0.47
PDXDC1-216ENST00000569715 C17orf53Q8N3J3 647 aaPredicted RBP12.11□□□□□ -0.47
PDXDC1-216ENST00000569715 KCTD10Q9H3F6 313 aa12.11□□□□□ -0.47
PDXDC1-216ENST00000569715 COL4A3BPQ9Y5P4 624 aa12.11□□□□□ -0.47
PDXDC1-216ENST00000569715 SYNGAP1Q96PV0 1343 aa12.11□□□□□ -0.47
PDXDC1-216ENST00000569715 PRPF6O94906 941 aaKnown RBP12.1□□□□□ -0.47
PDXDC1-216ENST00000569715 STBD1O95210 358 aa12.1□□□□□ -0.47
PDXDC1-216ENST00000569715 NMT1P30419 496 aaKnown RBP12.1□□□□□ -0.47
PDXDC1-216ENST00000569715 MYCT1Q8N699 235 aa12.1□□□□□ -0.47
PDXDC1-216ENST00000569715 CNOT6LQ96LI5 555 aaKnown RBP12.1□□□□□ -0.47
PDXDC1-216ENST00000569715 FIZ1Q96SL8 496 aa12.1□□□□□ -0.47
PDXDC1-216ENST00000569715 IKZF4Q9H2S9 585 aa12.1□□□□□ -0.47
PDXDC1-216ENST00000569715 MRPL44Q9H9J2 332 aaKnown RBP12.1□□□□□ -0.47
PDXDC1-216ENST00000569715 DOCK3Q8IZD9 2030 aa12.1□□□□□ -0.47
PDXDC1-216ENST00000569715 FARP2O94887 1054 aaPredicted RBP12.1□□□□□ -0.47
PDXDC1-216ENST00000569715 PSAPP07602 524 aa12.1□□□□□ -0.47
PDXDC1-216ENST00000569715 GUCY2CP25092 1073 aa12.1□□□□□ -0.47
PDXDC1-216ENST00000569715 ZNF131P52739 623 aa12.1□□□□□ -0.47
PDXDC1-216ENST00000569715 CPA4Q9UI42 421 aa12.1□□□□□ -0.47
PDXDC1-216ENST00000569715 LRRC10BA6NIK2 292 aa12.1□□□□□ -0.47
PDXDC1-216ENST00000569715 SUPT20HL2P0C7V6 817 aa12.1□□□□□ -0.47
PDXDC1-216ENST00000569715 SPAG1Q07617 926 aa12.1□□□□□ -0.47
PDXDC1-216ENST00000569715 XKR9Q5GH70 373 aa12.1□□□□□ -0.47
PDXDC1-216ENST00000569715 RGMBQ6NW40 437 aa12.1□□□□□ -0.47
PDXDC1-216ENST00000569715 KSR1Q8IVT5 923 aa12.1□□□□□ -0.47
PDXDC1-216ENST00000569715 PARVGQ9HBI0 331 aa12.1□□□□□ -0.47
PDXDC1-216ENST00000569715 GPRC5CQ9NQ84 441 aa12.1□□□□□ -0.47
PDXDC1-216ENST00000569715 GCNT3O95395 438 aa12.09□□□□□ -0.47
PDXDC1-216ENST00000569715 MSNP26038 577 aaKnown RBP12.09□□□□□ -0.47
PDXDC1-216ENST00000569715 PBX1P40424 430 aa12.09□□□□□ -0.47
PDXDC1-216ENST00000569715 PRKCEQ02156 737 aa12.09□□□□□ -0.47
PDXDC1-216ENST00000569715 LRRC63Q05C16 580 aa12.09□□□□□ -0.47
PDXDC1-216ENST00000569715 ZC2HC1CQ53FD0 456 aaPredicted RBP12.09□□□□□ -0.47
PDXDC1-216ENST00000569715 LRRC8AQ8IWT6 810 aa12.09□□□□□ -0.47
PDXDC1-216ENST00000569715 CTAGE1Q96RT6 745 aa12.09□□□□□ -0.47
PDXDC1-216ENST00000569715 PDGFCQ9NRA1 345 aa12.09□□□□□ -0.47
PDXDC1-216ENST00000569715 OLFML3Q9NRN5 406 aa12.09□□□□□ -0.47
PDXDC1-216ENST00000569715 KCND2Q9NZV8 630 aa12.09□□□□□ -0.47
PDXDC1-216ENST00000569715 IMPACTQ9P2X3 320 aa12.09□□□□□ -0.47
PDXDC1-216ENST00000569715 IGSF9BQ9UPX0 1349 aa12.09□□□□□ -0.47
PDXDC1-216ENST00000569715 N4BP3O15049 544 aa12.09□□□□□ -0.47
PDXDC1-216ENST00000569715 GGPS1O95749 300 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms