RNA–Protein interactions for RNA: ENST00000569066.2

UBR1-208, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 1 (best)

Gene UBR1, Length 2,250 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-208ENST00000569066 CXorf67Q86X51 503 aaPredicted RBP7.57□□□□□ -1.2
UBR1-208ENST00000569066 SEC14L1Q92503 715 aa7.57□□□□□ -1.2
UBR1-208ENST00000569066 FOXRED1Q96CU9 486 aaPredicted RBP7.57□□□□□ -1.2
UBR1-208ENST00000569066 INVSQ9Y283 1065 aa7.57□□□□□ -1.2
UBR1-208ENST00000569066 KIF3BO15066 747 aa7.56□□□□□ -1.2
UBR1-208ENST00000569066 FOXP2O15409 715 aa7.56□□□□□ -1.2
UBR1-208ENST00000569066 CFBP00751 764 aa7.56□□□□□ -1.2
UBR1-208ENST00000569066 LPLP06858 475 aa7.56□□□□□ -1.2
UBR1-208ENST00000569066 RTN4RL1Q86UN2 441 aaPredicted RBP7.56□□□□□ -1.2
UBR1-208ENST00000569066 AMOTL1Q8IY63 956 aa7.56□□□□□ -1.2
UBR1-208ENST00000569066 GBP4Q96PP9 640 aa7.56□□□□□ -1.2
UBR1-208ENST00000569066 RNF32Q9H0A6 362 aa7.56□□□□□ -1.2
UBR1-208ENST00000569066 AP5M1Q9H0R1 490 aa7.56□□□□□ -1.2
UBR1-208ENST00000569066 DNAJC28Q9NX36 388 aa7.56□□□□□ -1.2
UBR1-208ENST00000569066 F8W031 263 aaPredicted RBP7.55□□□□□ -1.2
UBR1-208ENST00000569066 MAFKO60675 156 aa7.55□□□□□ -1.2
UBR1-208ENST00000569066 APOL3O95236 402 aa7.55□□□□□ -1.2
UBR1-208ENST00000569066 MOGSQ13724 837 aa7.55□□□□□ -1.2
UBR1-208ENST00000569066 TOR2AQ5JU69 321 aa7.55□□□□□ -1.2
UBR1-208ENST00000569066 CCDC62Q6P9F0 684 aa7.55□□□□□ -1.2
UBR1-208ENST00000569066 FRMD7Q6ZUT3 714 aa7.55□□□□□ -1.2
UBR1-208ENST00000569066 NETO2Q8NC67 525 aa7.55□□□□□ -1.2
UBR1-208ENST00000569066 EAF2Q96CJ1 260 aaPredicted RBP7.55□□□□□ -1.2
UBR1-208ENST00000569066 ORAI2Q96SN7 254 aa7.55□□□□□ -1.2
UBR1-208ENST00000569066 TCF7L1Q9HCS4 588 aa7.55□□□□□ -1.2
UBR1-208ENST00000569066 FXR1P51114 621 aaKnown RBP eCLIP7.55□□□□□ -1.2
UBR1-208ENST00000569066 MANFP55145 182 aaKnown RBP7.55□□□□□ -1.2
UBR1-208ENST00000569066 CHRNA2Q15822 529 aa7.55□□□□□ -1.2
UBR1-208ENST00000569066 CILP2Q8IUL8 1156 aa7.55□□□□□ -1.2
UBR1-208ENST00000569066 TP53INP2Q8IXH6 220 aa7.55□□□□□ -1.2
UBR1-208ENST00000569066 MYLIPQ8WY64 445 aa7.55□□□□□ -1.2
UBR1-208ENST00000569066 CAMKK2Q96RR4 588 aa7.55□□□□□ -1.2
UBR1-208ENST00000569066 UCKL1Q9NWZ5 548 aa7.55□□□□□ -1.2
UBR1-208ENST00000569066 KLHL33A6NCF5 533 aa7.54□□□□□ -1.2
UBR1-208ENST00000569066 MYBP10242 640 aa7.54□□□□□ -1.2
UBR1-208ENST00000569066 ENPP1P22413 925 aa7.54□□□□□ -1.2
UBR1-208ENST00000569066 SDHAP31040 664 aa7.54□□□□□ -1.2
UBR1-208ENST00000569066 GJA4P35212 333 aa7.54□□□□□ -1.2
UBR1-208ENST00000569066 GDNFP39905 211 aa7.54□□□□□ -1.2
UBR1-208ENST00000569066 PAN2Q504Q3 1202 aaKnown RBP7.54□□□□□ -1.2
UBR1-208ENST00000569066 PITRM1Q5JRX3 1037 aa7.54□□□□□ -1.2
UBR1-208ENST00000569066 CYP4F22Q6NT55 531 aa7.54□□□□□ -1.2
UBR1-208ENST00000569066 HSPBAP1Q96EW2 488 aa7.54□□□□□ -1.2
UBR1-208ENST00000569066 MYL10Q9BUA6 226 aa7.54□□□□□ -1.2
UBR1-208ENST00000569066 GEMIN8Q9NWZ8 242 aaKnown RBP7.54□□□□□ -1.2
UBR1-208ENST00000569066 MRFAP1Q9Y605 127 aa7.54□□□□□ -1.2
UBR1-208ENST00000569066 KIAA1324LA8MWY0 1029 aaPredicted RBP7.54□□□□□ -1.2
UBR1-208ENST00000569066 IL33O95760 270 aa7.54□□□□□ -1.2
UBR1-208ENST00000569066 TMEM240Q5SV17 173 aa7.54□□□□□ -1.2
UBR1-208ENST00000569066 ADGRF1Q5T601 910 aa7.54□□□□□ -1.2
UBR1-208ENST00000569066 CATIPQ7Z7H3 387 aa7.54□□□□□ -1.2
UBR1-208ENST00000569066 C7orf31Q8N865 590 aa7.54□□□□□ -1.2
UBR1-208ENST00000569066 PHOSPHO1Q8TCT1 267 aa7.54□□□□□ -1.2
UBR1-208ENST00000569066 PMM1Q92871 262 aa7.54□□□□□ -1.2
UBR1-208ENST00000569066 SYT3Q9BQG1 590 aa7.54□□□□□ -1.2
UBR1-208ENST00000569066 BTBD7Q9P203 1132 aa7.54□□□□□ -1.2
UBR1-208ENST00000569066 SERPINB13Q9UIV8 391 aa7.54□□□□□ -1.2
UBR1-208ENST00000569066 ANKRD6Q9Y2G4 727 aa7.54□□□□□ -1.2
UBR1-208ENST00000569066 SRGAP3O43295 1099 aa7.53□□□□□ -1.2
UBR1-208ENST00000569066 ASGR2P07307 311 aa7.53□□□□□ -1.2
UBR1-208ENST00000569066 ZNF267Q14586 743 aaPredicted RBP7.53□□□□□ -1.2
UBR1-208ENST00000569066 MYBPC3Q14896 1274 aa7.53□□□□□ -1.2
UBR1-208ENST00000569066 EPHA7Q15375 998 aa7.53□□□□□ -1.2
UBR1-208ENST00000569066 FSCN1Q16658 493 aaKnown RBP7.53□□□□□ -1.2
UBR1-208ENST00000569066 ZNF792Q3KQV3 632 aa7.53□□□□□ -1.2
UBR1-208ENST00000569066 FYB2Q5VWT5 728 aa7.53□□□□□ -1.2
UBR1-208ENST00000569066 RPTNQ6XPR3 784 aa7.53□□□□□ -1.2
UBR1-208ENST00000569066 HIPK4Q8NE63 616 aa7.53□□□□□ -1.2
UBR1-208ENST00000569066 RELTQ969Z4 430 aa7.53□□□□□ -1.2
UBR1-208ENST00000569066 ARNT2Q9HBZ2 717 aa7.53□□□□□ -1.2
UBR1-208ENST00000569066 DDX20Q9UHI6 824 aaKnown RBP7.53□□□□□ -1.2
UBR1-208ENST00000569066 CTNND2Q9UQB3 1225 aa7.53□□□□□ -1.2
UBR1-208ENST00000569066 CYBBP04839 570 aa7.53□□□□□ -1.2
UBR1-208ENST00000569066 C5AR1P21730 350 aa7.53□□□□□ -1.2
UBR1-208ENST00000569066 ARL4AP40617 200 aa7.53□□□□□ -1.2
UBR1-208ENST00000569066 STAT5AP42229 794 aa7.53□□□□□ -1.2
UBR1-208ENST00000569066 FNTBP49356 437 aa7.53□□□□□ -1.2
UBR1-208ENST00000569066 EFCAB2Q5VUJ9 269 aa7.53□□□□□ -1.2
UBR1-208ENST00000569066 TTLL7Q6ZT98 887 aa7.53□□□□□ -1.2
UBR1-208ENST00000569066 ZZZ3Q8IYH5 903 aa7.53□□□□□ -1.2
UBR1-208ENST00000569066 PPM1NQ8N819 430 aa7.53□□□□□ -1.2
UBR1-208ENST00000569066 OBP2AQ9NY56 170 aa7.53□□□□□ -1.2
UBR1-208ENST00000569066 DBR1Q9UK59 544 aaKnown RBP7.53□□□□□ -1.2
UBR1-208ENST00000569066 PRSS38A1L453 326 aa7.52□□□□□ -1.21
UBR1-208ENST00000569066 PRAMEF22A3QJZ6 481 aa7.52□□□□□ -1.21
UBR1-208ENST00000569066 RGS3P49796 1198 aa7.52□□□□□ -1.21
UBR1-208ENST00000569066 CCT2P78371 535 aaKnown RBP7.52□□□□□ -1.21
UBR1-208ENST00000569066 PRR5P85299 388 aa7.52□□□□□ -1.21
UBR1-208ENST00000569066 PRAMEF18Q5VWM3 479 aa7.52□□□□□ -1.21
UBR1-208ENST00000569066 PAQR3Q6TCH7 311 aa7.52□□□□□ -1.21
UBR1-208ENST00000569066 CLIP3Q96DZ5 547 aa7.52□□□□□ -1.21
UBR1-208ENST00000569066 SLC39A2Q9NP94 309 aa7.52□□□□□ -1.21
UBR1-208ENST00000569066 TUBD1Q9UJT1 453 aa7.52□□□□□ -1.21
UBR1-208ENST00000569066 WASF3Q9UPY6 502 aa7.52□□□□□ -1.21
UBR1-208ENST00000569066 GIT1Q9Y2X7 761 aa7.52□□□□□ -1.21
UBR1-208ENST00000569066 UBA6A0AVT1 1052 aaPredicted RBP7.52□□□□□ -1.21
UBR1-208ENST00000569066 PRLP01236 227 aa7.52□□□□□ -1.21
UBR1-208ENST00000569066 PNLIPP16233 465 aa7.52□□□□□ -1.21
UBR1-208ENST00000569066 FAHP16930 419 aa7.52□□□□□ -1.21
UBR1-208ENST00000569066 LPOP22079 712 aaPredicted RBP7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms