RNA–Protein interactions for RNA: ENST00000564678.1

HERPUD1-209, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 2,199 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-209ENST00000564678 ENPP3O14638 875 aa8.03□□□□□ -1.12
HERPUD1-209ENST00000564678 SH3BP5O60239 455 aa8.03□□□□□ -1.12
HERPUD1-209ENST00000564678 KIF5CO60282 957 aa8.03□□□□□ -1.12
HERPUD1-209ENST00000564678 URI1O94763 535 aaPredicted RBP8.03□□□□□ -1.12
HERPUD1-209ENST00000564678 IDEP14735 1019 aa8.03□□□□□ -1.12
HERPUD1-209ENST00000564678 KCNA3P22001 575 aa8.03□□□□□ -1.12
HERPUD1-209ENST00000564678 RPA1P27694 616 aa8.03□□□□□ -1.12
HERPUD1-209ENST00000564678 TIE1P35590 1138 aa8.03□□□□□ -1.12
HERPUD1-209ENST00000564678 MTIF2P46199 727 aaKnown RBP8.03□□□□□ -1.12
HERPUD1-209ENST00000564678 BAG6P46379 1132 aa8.03□□□□□ -1.12
HERPUD1-209ENST00000564678 CDK17Q00537 523 aa8.03□□□□□ -1.12
HERPUD1-209ENST00000564678 RRP1BQ14684 758 aaKnown RBP8.03□□□□□ -1.12
HERPUD1-209ENST00000564678 MEA1Q16626 185 aa8.03□□□□□ -1.12
HERPUD1-209ENST00000564678 SHROOM1Q2M3G4 852 aaPredicted RBP8.03□□□□□ -1.12
HERPUD1-209ENST00000564678 KCNK18Q7Z418 384 aa8.03□□□□□ -1.12
HERPUD1-209ENST00000564678 CCDC84Q86UT8 332 aaPredicted RBP8.03□□□□□ -1.12
HERPUD1-209ENST00000564678 FAM160B2Q86V87 743 aa8.03□□□□□ -1.12
HERPUD1-209ENST00000564678 RAVER1Q8IY67 606 aaKnown RBP8.03□□□□□ -1.12
HERPUD1-209ENST00000564678 CCDC170Q8IYT3 715 aa8.03□□□□□ -1.12
HERPUD1-209ENST00000564678 MYOCDQ8IZQ8 938 aa8.03□□□□□ -1.12
HERPUD1-209ENST00000564678 ZNF397Q8NF99 534 aaPredicted RBP8.03□□□□□ -1.12
HERPUD1-209ENST00000564678 TTYH3Q9C0H2 523 aa8.03□□□□□ -1.12
HERPUD1-209ENST00000564678 ZNRF3Q9ULT6 936 aa8.03□□□□□ -1.12
HERPUD1-209ENST00000564678 EPN1Q9Y6I3 576 aaPredicted RBP8.03□□□□□ -1.12
HERPUD1-209ENST00000564678 PES1O00541 588 aaKnown RBP8.03□□□□□ -1.12
HERPUD1-209ENST00000564678 RAD17O75943 681 aa8.03□□□□□ -1.12
HERPUD1-209ENST00000564678 GNA14O95837 355 aa8.03□□□□□ -1.12
HERPUD1-209ENST00000564678 IGHA2P01877 340 aa8.03□□□□□ -1.12
HERPUD1-209ENST00000564678 PLA2G4BP0C869 781 aa8.03□□□□□ -1.12
HERPUD1-209ENST00000564678 TGFB2P61812 414 aa8.03□□□□□ -1.12
HERPUD1-209ENST00000564678 ERVK-24P63145 666 aa8.03□□□□□ -1.12
HERPUD1-209ENST00000564678 JAG1P78504 1218 aa8.03□□□□□ -1.12
HERPUD1-209ENST00000564678 ZBED6P86452 979 aa8.03□□□□□ -1.12
HERPUD1-209ENST00000564678 FKBP3Q00688 224 aaKnown RBP8.03□□□□□ -1.12
HERPUD1-209ENST00000564678 SETQ01105 290 aaPredicted RBP8.03□□□□□ -1.12
HERPUD1-209ENST00000564678 SPIRE1Q08AE8 756 aa8.03□□□□□ -1.12
HERPUD1-209ENST00000564678 MTF1Q14872 753 aa8.03□□□□□ -1.12
HERPUD1-209ENST00000564678 MAN2A1Q16706 1144 aa8.03□□□□□ -1.12
HERPUD1-209ENST00000564678 MIIPQ5JXC2 388 aa8.03□□□□□ -1.12
HERPUD1-209ENST00000564678 FAM26FQ5R3K3 315 aa8.03□□□□□ -1.12
HERPUD1-209ENST00000564678 TRAF7Q6Q0C0 670 aa8.03□□□□□ -1.12
HERPUD1-209ENST00000564678 TPCN2Q8NHX9 752 aa8.03□□□□□ -1.12
HERPUD1-209ENST00000564678 RPS6KC1Q96S38 1066 aa8.03□□□□□ -1.12
HERPUD1-209ENST00000564678 ADAM33Q9BZ11 813 aa8.03□□□□□ -1.12
HERPUD1-209ENST00000564678 EDEM3Q9BZQ6 932 aa8.03□□□□□ -1.12
HERPUD1-209ENST00000564678 PANK4Q9NVE7 773 aa8.03□□□□□ -1.12
HERPUD1-209ENST00000564678 ZNHIT6Q9NWK9 470 aaKnown RBP8.03□□□□□ -1.12
HERPUD1-209ENST00000564678 RGS17Q9UGC6 210 aaPredicted RBP8.03□□□□□ -1.12
HERPUD1-209ENST00000564678 FRMD3A2A2Y4 597 aa8.02□□□□□ -1.13
HERPUD1-209ENST00000564678 B4DLN1 442 aa8.02□□□□□ -1.13
HERPUD1-209ENST00000564678 RNF225M0QZC1 329 aaPredicted RBP8.02□□□□□ -1.13
HERPUD1-209ENST00000564678 NDUFA10O95299 355 aa8.02□□□□□ -1.13
HERPUD1-209ENST00000564678 CTSHP09668 335 aa8.02□□□□□ -1.13
HERPUD1-209ENST00000564678 TRIM21P19474 475 aaKnown RBP8.02□□□□□ -1.13
HERPUD1-209ENST00000564678 MUTP22033 750 aa8.02□□□□□ -1.13
HERPUD1-209ENST00000564678 KRT83P78385 493 aa8.02□□□□□ -1.13
HERPUD1-209ENST00000564678 COASYQ13057 564 aa8.02□□□□□ -1.13
HERPUD1-209ENST00000564678 VWA3BQ502W6 1294 aa8.02□□□□□ -1.13
HERPUD1-209ENST00000564678 ARHGAP29Q52LW3 1261 aa8.02□□□□□ -1.13
HERPUD1-209ENST00000564678 PRR16Q569H4 304 aa8.02□□□□□ -1.13
HERPUD1-209ENST00000564678 ZFYVE27Q5T4F4 411 aa8.02□□□□□ -1.13
HERPUD1-209ENST00000564678 POTEAQ6S8J7 498 aa8.02□□□□□ -1.13
HERPUD1-209ENST00000564678 NIM1KQ8IY84 436 aa8.02□□□□□ -1.13
HERPUD1-209ENST00000564678 SIX5Q8N196 739 aa8.02□□□□□ -1.13
HERPUD1-209ENST00000564678 MNS1Q8NEH6 495 aa8.02□□□□□ -1.13
HERPUD1-209ENST00000564678 KIFC2Q96AC6 838 aa8.02□□□□□ -1.13
HERPUD1-209ENST00000564678 LENG9Q96B70 501 aa8.02□□□□□ -1.13
HERPUD1-209ENST00000564678 ZBED3Q96IU2 234 aaPredicted RBP8.02□□□□□ -1.13
HERPUD1-209ENST00000564678 CEP63Q96MT8 703 aa8.02□□□□□ -1.13
HERPUD1-209ENST00000564678 WDR24Q96S15 920 aa8.02□□□□□ -1.13
HERPUD1-209ENST00000564678 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.02□□□□□ -1.134e-9■■□□□ 14
HERPUD1-209ENST00000564678 DESI2Q9BSY9 194 aa8.02□□□□□ -1.13
HERPUD1-209ENST00000564678 IER2Q9BTL4 223 aa8.02□□□□□ -1.13
HERPUD1-209ENST00000564678 POLR3CQ9BUI4 534 aaPredicted RBP8.02□□□□□ -1.13
HERPUD1-209ENST00000564678 DEFB129Q9H1M3 183 aa8.02□□□□□ -1.13
HERPUD1-209ENST00000564678 RANBP17Q9H2T7 1088 aaKnown RBP8.02□□□□□ -1.13
HERPUD1-209ENST00000564678 NDST4Q9H3R1 872 aa8.02□□□□□ -1.13
HERPUD1-209ENST00000564678 VCPKMTQ9H867 229 aa8.02□□□□□ -1.13
HERPUD1-209ENST00000564678 EHMT1Q9H9B1 1298 aa8.02□□□□□ -1.13
HERPUD1-209ENST00000564678 MRPL44Q9H9J2 332 aaKnown RBP8.02□□□□□ -1.13
HERPUD1-209ENST00000564678 GINM1Q9NU53 330 aa8.02□□□□□ -1.13
HERPUD1-209ENST00000564678 FEM1BQ9UK73 627 aa8.02□□□□□ -1.13
HERPUD1-209ENST00000564678 ZBTB21Q9ULJ3 1066 aa8.02□□□□□ -1.13
HERPUD1-209ENST00000564678 DNM3Q9UQ16 869 aa8.02□□□□□ -1.13
HERPUD1-209ENST00000564678 MRPL11Q9Y3B7 192 aaKnown RBP8.02□□□□□ -1.13
HERPUD1-209ENST00000564678 RABGAP1Q9Y3P9 1069 aa8.02□□□□□ -1.13
HERPUD1-209ENST00000564678 MRFAP1Q9Y605 127 aa8.02□□□□□ -1.13
HERPUD1-209ENST00000564678 CNTNAP1P78357 1384 aa8.02□□□□□ -1.13
HERPUD1-209ENST00000564678 OPLAHO14841 1288 aa8.01□□□□□ -1.13
HERPUD1-209ENST00000564678 FANCGO15287 622 aa8.01□□□□□ -1.13
HERPUD1-209ENST00000564678 ASNSP08243 561 aa8.01□□□□□ -1.13
HERPUD1-209ENST00000564678 PDGFRBP09619 1106 aa8.01□□□□□ -1.13
HERPUD1-209ENST00000564678 DPEP1P16444 411 aa8.01□□□□□ -1.13
HERPUD1-209ENST00000564678 CYP11B2P19099 503 aa8.01□□□□□ -1.13
HERPUD1-209ENST00000564678 HNRNPH3P31942 346 aaKnown RBP8.01□□□□□ -1.13
HERPUD1-209ENST00000564678 CYLC1P35663 651 aaPredicted RBP8.01□□□□□ -1.13
HERPUD1-209ENST00000564678 CAP2P40123 477 aa8.01□□□□□ -1.13
HERPUD1-209ENST00000564678 ECE1P42892 770 aa8.01□□□□□ -1.13
HERPUD1-209ENST00000564678 SLC12A3P55017 1021 aa8.01□□□□□ -1.13
HERPUD1-209ENST00000564678 BIRC2Q13490 618 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms