RNA–Protein interactions for RNA: ENST00000563404.1

HDGFL3-203, Transcript of HDGF like 3, humanhuman

TSL 5

Gene HDGFL3, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-203ENST00000563404 CCNE2O96020 404 aa19.18■□□□□ 0.66
HDGFL3-203ENST00000563404 STAT5BP51692 787 aa19.18■□□□□ 0.66
HDGFL3-203ENST00000563404 ADCY7P51828 1080 aa19.18■□□□□ 0.66
HDGFL3-203ENST00000563404 ZP2Q05996 745 aa19.18■□□□□ 0.66
HDGFL3-203ENST00000563404 RTN1Q16799 776 aa19.18■□□□□ 0.66
HDGFL3-203ENST00000563404 IER5Q5VY09 327 aa19.18■□□□□ 0.66
HDGFL3-203ENST00000563404 PPP1R18Q6NYC8 613 aa19.18■□□□□ 0.66
HDGFL3-203ENST00000563404 SYNE3Q6ZMZ3 975 aa19.18■□□□□ 0.66
HDGFL3-203ENST00000563404 SDF4Q9BRK5 362 aa19.18■□□□□ 0.66
HDGFL3-203ENST00000563404 TMX1Q9H3N1 280 aa19.18■□□□□ 0.66
HDGFL3-203ENST00000563404 ALG13Q9NP73 1137 aaKnown RBP19.18■□□□□ 0.66
HDGFL3-203ENST00000563404 PLAGL2Q9UPG8 496 aa19.18■□□□□ 0.66
HDGFL3-203ENST00000563404 HCN4Q9Y3Q4 1203 aa19.18■□□□□ 0.66
HDGFL3-203ENST00000563404 ARIH1Q9Y4X5 557 aaPredicted RBP19.18■□□□□ 0.66
HDGFL3-203ENST00000563404 SQORQ9Y6N5 450 aa19.18■□□□□ 0.66
HDGFL3-203ENST00000563404 IGSF9BQ9UPX0 1349 aa19.18■□□□□ 0.66
HDGFL3-203ENST00000563404 IGKV6D-21A0A0A0MT36 114 aa19.17■□□□□ 0.66
HDGFL3-203ENST00000563404 SMCO2A6NFE2 343 aa19.17■□□□□ 0.66
HDGFL3-203ENST00000563404 C19orf67A6NJJ6 358 aa19.17■□□□□ 0.66
HDGFL3-203ENST00000563404 ADAMTS3O15072 1205 aa19.17■□□□□ 0.66
HDGFL3-203ENST00000563404 ZBTB43O43298 467 aa19.17■□□□□ 0.66
HDGFL3-203ENST00000563404 FOSP01100 380 aaPredicted RBP19.17■□□□□ 0.66
HDGFL3-203ENST00000563404 RPLP2P05387 115 aaKnown RBP19.17■□□□□ 0.66
HDGFL3-203ENST00000563404 DNAJB1P25685 340 aa19.17■□□□□ 0.66
HDGFL3-203ENST00000563404 CDC27P30260 824 aa19.17■□□□□ 0.66
HDGFL3-203ENST00000563404 SREBF1P36956 1147 aa19.17■□□□□ 0.66
HDGFL3-203ENST00000563404 GATMP50440 423 aa19.17■□□□□ 0.66
HDGFL3-203ENST00000563404 CLUL1Q15846 466 aa19.17■□□□□ 0.66
HDGFL3-203ENST00000563404 MTHFD1LQ6UB35 978 aa19.17■□□□□ 0.66
HDGFL3-203ENST00000563404 CELF4Q9BZC1 486 aaKnown RBP19.17■□□□□ 0.66
HDGFL3-203ENST00000563404 BARHL2Q9NY43 387 aa19.17■□□□□ 0.66
HDGFL3-203ENST00000563404 KIAA1671Q9BY89 1806 aa19.16■□□□□ 0.66
HDGFL3-203ENST00000563404 SMIM35A0A1B0GVV1 85 aa19.16■□□□□ 0.66
HDGFL3-203ENST00000563404 LINC01565O15544 149 aa19.16■□□□□ 0.66
HDGFL3-203ENST00000563404 MMP1P03956 469 aa19.16■□□□□ 0.66
HDGFL3-203ENST00000563404 TMEM266Q2M3C6 531 aa19.16■□□□□ 0.66
HDGFL3-203ENST00000563404 PAN2Q504Q3 1202 aaKnown RBP19.16■□□□□ 0.66
HDGFL3-203ENST00000563404 ABHD15Q6UXT9 468 aa19.16■□□□□ 0.66
HDGFL3-203ENST00000563404 DHX32Q7L7V1 743 aaKnown RBP19.16■□□□□ 0.66
HDGFL3-203ENST00000563404 NPAS4Q8IUM7 802 aa19.16■□□□□ 0.66
HDGFL3-203ENST00000563404 CMTR2Q8IYT2 770 aaKnown RBP19.16■□□□□ 0.66
HDGFL3-203ENST00000563404 PLVAPQ9BX97 442 aa19.16■□□□□ 0.66
HDGFL3-203ENST00000563404 FTHL17Q9BXU8 183 aa19.16■□□□□ 0.66
HDGFL3-203ENST00000563404 CDHR5Q9HBB8 845 aa19.16■□□□□ 0.66
HDGFL3-203ENST00000563404 KDM3AQ9Y4C1 1321 aa19.16■□□□□ 0.66
HDGFL3-203ENST00000563404 LOXHD1Q8IVV2 1947 aa19.15■□□□□ 0.66
HDGFL3-203ENST00000563404 FAM86B1E9PN63 330 aa19.15■□□□□ 0.66
HDGFL3-203ENST00000563404 DDX39AO00148 427 aaKnown RBP19.15■□□□□ 0.66
HDGFL3-203ENST00000563404 DHX15O43143 795 aaKnown RBP19.15■□□□□ 0.66
HDGFL3-203ENST00000563404 NCK2O43639 380 aa19.15■□□□□ 0.66
HDGFL3-203ENST00000563404 MGEA5O60502 916 aa19.15■□□□□ 0.66
HDGFL3-203ENST00000563404 TBX10O75333 385 aa19.15■□□□□ 0.66
HDGFL3-203ENST00000563404 ITGB1P05556 798 aa19.15■□□□□ 0.66
HDGFL3-203ENST00000563404 FAM86B2P0C5J1 330 aa19.15■□□□□ 0.66
HDGFL3-203ENST00000563404 HOXD11P31277 338 aaPredicted RBP19.15■□□□□ 0.66
HDGFL3-203ENST00000563404 PAK2Q13177 524 aa19.15■□□□□ 0.66
HDGFL3-203ENST00000563404 TSGA10IPQ3SY00 556 aa19.15■□□□□ 0.66
HDGFL3-203ENST00000563404 BMP2KLQ5H9B9 411 aa19.15■□□□□ 0.66
HDGFL3-203ENST00000563404 RNF20Q5VTR2 975 aa19.15■□□□□ 0.66
HDGFL3-203ENST00000563404 CCDC60Q8IWA6 550 aaPredicted RBP19.15■□□□□ 0.66
HDGFL3-203ENST00000563404 TEX2Q8IWB9 1127 aa19.15■□□□□ 0.66
HDGFL3-203ENST00000563404 SPPL3Q8TCT6 385 aa19.15■□□□□ 0.66
HDGFL3-203ENST00000563404 P2RX5Q93086 422 aa19.15■□□□□ 0.66
HDGFL3-203ENST00000563404 UIMC1Q96RL1 719 aa19.15■□□□□ 0.66
HDGFL3-203ENST00000563404 IGFLR1Q9H665 355 aa19.15■□□□□ 0.66
HDGFL3-203ENST00000563404 IGLV3-22A0A075B6J6 115 aa19.14■□□□□ 0.65
HDGFL3-203ENST00000563404 KLF18A0A0U1RQI7 1052 aa19.14■□□□□ 0.65
HDGFL3-203ENST00000563404 GOLGA8AA7E2F4 631 aa19.14■□□□□ 0.65
HDGFL3-203ENST00000563404 GOLGA8BA8MQT2 603 aa19.14■□□□□ 0.65
HDGFL3-203ENST00000563404 PRR33A8MZF0 331 aa19.14■□□□□ 0.65
HDGFL3-203ENST00000563404 ZBTB42B2RXF5 422 aa19.14■□□□□ 0.65
HDGFL3-203ENST00000563404 hCG_1984214I3L0E3 225 aa19.14■□□□□ 0.65
HDGFL3-203ENST00000563404 M0QZ92 97 aa19.14■□□□□ 0.65
HDGFL3-203ENST00000563404 SCG2P13521 617 aa19.14■□□□□ 0.65
HDGFL3-203ENST00000563404 ALADP13716 330 aa19.14■□□□□ 0.65
HDGFL3-203ENST00000563404 ATP4AP20648 1035 aa19.14■□□□□ 0.65
HDGFL3-203ENST00000563404 KLRC1P26715 233 aa19.14■□□□□ 0.65
HDGFL3-203ENST00000563404 IRS1P35568 1242 aa19.14■□□□□ 0.65
HDGFL3-203ENST00000563404 KRT76Q01546 638 aa19.14■□□□□ 0.65
HDGFL3-203ENST00000563404 AP3B2Q13367 1082 aa19.14■□□□□ 0.65
HDGFL3-203ENST00000563404 SMAD2Q15796 467 aaKnown RBP19.14■□□□□ 0.65
HDGFL3-203ENST00000563404 JAKMIP3Q5VZ66 844 aa19.14■□□□□ 0.65
HDGFL3-203ENST00000563404 NIPA1Q7RTP0 329 aa19.14■□□□□ 0.65
HDGFL3-203ENST00000563404 ADHFE1Q8IWW8 467 aa19.14■□□□□ 0.65
HDGFL3-203ENST00000563404 NME8Q8N427 588 aa19.14■□□□□ 0.65
HDGFL3-203ENST00000563404 ZNF713Q8N859 430 aaPredicted RBP19.14■□□□□ 0.65
HDGFL3-203ENST00000563404 KLHL23Q8NBE8 558 aa19.14■□□□□ 0.65
HDGFL3-203ENST00000563404 TMEM40Q8WWA1 233 aa19.14■□□□□ 0.65
HDGFL3-203ENST00000563404 CRYGNQ8WXF5 182 aa19.14■□□□□ 0.65
HDGFL3-203ENST00000563404 ERVK-5Q9HDB9 667 aa19.14■□□□□ 0.65
HDGFL3-203ENST00000563404 PRKAG3Q9UGI9 489 aa19.14■□□□□ 0.65
HDGFL3-203ENST00000563404 MBTPS2O43462 519 aa19.13■□□□□ 0.65
HDGFL3-203ENST00000563404 CPA1P15085 419 aa19.13■□□□□ 0.65
HDGFL3-203ENST00000563404 ADD1P35611 737 aaKnown RBP19.13■□□□□ 0.65
HDGFL3-203ENST00000563404 SLC26A2P50443 739 aa19.13■□□□□ 0.65
HDGFL3-203ENST00000563404 ADAM15Q13444 863 aa19.13■□□□□ 0.65
HDGFL3-203ENST00000563404 ADGRD2Q7Z7M1 963 aa19.13■□□□□ 0.65
HDGFL3-203ENST00000563404 KIAA0319LQ8IZA0 1049 aa19.13■□□□□ 0.65
HDGFL3-203ENST00000563404 ATP8B4Q8TF62 1192 aa19.13■□□□□ 0.65
HDGFL3-203ENST00000563404 TNPO1Q92973 898 aaKnown RBP19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms