RNA–Protein interactions for RNA: ENST00000558288.1

HMG20A-204, Transcript of high mobility group 20A, humanhuman

Gene HMG20A, Length 3,558 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-204ENST00000558288 RBM17Q96I25 401 aaKnown RBP5.52□□□□□ -1.53
HMG20A-204ENST00000558288 CALR3Q96L12 384 aaKnown RBP5.52□□□□□ -1.53
HMG20A-204ENST00000558288 INPP4AQ96PE3 977 aaPredicted RBP5.52□□□□□ -1.53
HMG20A-204ENST00000558288 LSM14BQ9BX40 385 aaKnown RBP5.52□□□□□ -1.53
HMG20A-204ENST00000558288 SEMA6BQ9H3T3 888 aa5.52□□□□□ -1.53
HMG20A-204ENST00000558288 CNOT10Q9H9A5 744 aaKnown RBP5.52□□□□□ -1.53
HMG20A-204ENST00000558288 PANK4Q9NVE7 773 aa5.52□□□□□ -1.53
HMG20A-204ENST00000558288 SIK3Q9Y2K2 1263 aa5.52□□□□□ -1.53
HMG20A-204ENST00000558288 UTP11Q9Y3A2 253 aaKnown RBP5.52□□□□□ -1.53
HMG20A-204ENST00000558288 RGPD3A6NKT7 1758 aaPredicted RBP5.52□□□□□ -1.53
HMG20A-204ENST00000558288 RGPD4Q7Z3J3 1758 aa5.52□□□□□ -1.53
HMG20A-204ENST00000558288 C5orf60A6NFR6 353 aa5.52□□□□□ -1.53
HMG20A-204ENST00000558288 F8W031 263 aaPredicted RBP5.52□□□□□ -1.53
HMG20A-204ENST00000558288 TRAF5O00463 557 aa5.52□□□□□ -1.53
HMG20A-204ENST00000558288 UPP2O95045 317 aa5.52□□□□□ -1.53
HMG20A-204ENST00000558288 CELF2O95319 508 aaKnown RBP5.52□□□□□ -1.53
HMG20A-204ENST00000558288 CALML3P27482 149 aa5.52□□□□□ -1.53
HMG20A-204ENST00000558288 HNRNPH3P31942 346 aaKnown RBP5.52□□□□□ -1.53
HMG20A-204ENST00000558288 VEGFBP49765 207 aa5.52□□□□□ -1.53
HMG20A-204ENST00000558288 KCNJ2P63252 427 aa5.52□□□□□ -1.53
HMG20A-204ENST00000558288 AMPD3Q01432 767 aa5.52□□□□□ -1.53
HMG20A-204ENST00000558288 KLHL30Q0D2K2 578 aa5.52□□□□□ -1.53
HMG20A-204ENST00000558288 FUT2Q10981 343 aa5.52□□□□□ -1.53
HMG20A-204ENST00000558288 PRKG1Q13976 671 aa5.52□□□□□ -1.53
HMG20A-204ENST00000558288 NAB2Q15742 525 aa5.52□□□□□ -1.53
HMG20A-204ENST00000558288 MAEAQ7L5Y9 396 aa5.52□□□□□ -1.53
HMG20A-204ENST00000558288 TRPM8Q7Z2W7 1104 aa5.52□□□□□ -1.53
HMG20A-204ENST00000558288 ADAT2Q7Z6V5 191 aaKnown RBP5.52□□□□□ -1.53
HMG20A-204ENST00000558288 HOOK3Q86VS8 718 aa5.52□□□□□ -1.53
HMG20A-204ENST00000558288 LDHDQ86WU2 507 aa5.52□□□□□ -1.53
HMG20A-204ENST00000558288 DNAAF5Q86Y56 855 aa5.52□□□□□ -1.53
HMG20A-204ENST00000558288 ZSCAN29Q8IWY8 852 aaPredicted RBP5.52□□□□□ -1.53
HMG20A-204ENST00000558288 LRRC34Q8IZ02 419 aa5.52□□□□□ -1.53
HMG20A-204ENST00000558288 MAB21L3Q8N8X9 362 aa5.52□□□□□ -1.53
HMG20A-204ENST00000558288 FAM133AQ8N9E0 248 aa5.52□□□□□ -1.53
HMG20A-204ENST00000558288 ZBTB38Q8NAP3 1195 aaPredicted RBP5.52□□□□□ -1.53
HMG20A-204ENST00000558288 MGARPQ8TDB4 240 aa5.52□□□□□ -1.53
HMG20A-204ENST00000558288 CDK5RAP3Q96JB5 506 aa5.52□□□□□ -1.53
HMG20A-204ENST00000558288 TSG101Q99816 390 aa5.52□□□□□ -1.53
HMG20A-204ENST00000558288 PRMT1Q99873 361 aaKnown RBP5.52□□□□□ -1.53
HMG20A-204ENST00000558288 CELF4Q9BZC1 486 aaKnown RBP5.52□□□□□ -1.53
HMG20A-204ENST00000558288 FAM129AQ9BZQ8 928 aa5.52□□□□□ -1.53
HMG20A-204ENST00000558288 TRIM9Q9C026 710 aa5.52□□□□□ -1.53
HMG20A-204ENST00000558288 NSRP1Q9H0G5 558 aaKnown RBP5.52□□□□□ -1.53
HMG20A-204ENST00000558288 INTS9Q9NV88 658 aaKnown RBP5.52□□□□□ -1.53
HMG20A-204ENST00000558288 KBTBD4Q9NVX7 518 aa5.52□□□□□ -1.53
HMG20A-204ENST00000558288 ANKIB1Q9P2G1 1089 aa5.52□□□□□ -1.53
HMG20A-204ENST00000558288 LAMB4A4D0S4 1761 aa5.52□□□□□ -1.53
HMG20A-204ENST00000558288 RIC1Q4ADV7 1423 aa5.52□□□□□ -1.53
HMG20A-204ENST00000558288 USP54Q70EL1 1684 aa5.52□□□□□ -1.53
HMG20A-204ENST00000558288 FAM205AQ6ZU69 1335 aa5.52□□□□□ -1.53
HMG20A-204ENST00000558288 CNTNAP5Q8WYK1 1306 aa5.52□□□□□ -1.53
HMG20A-204ENST00000558288 SIPA1L3O60292 1781 aaPredicted RBP5.52□□□□□ -1.53
HMG20A-204ENST00000558288 MAGEB6P1A0A0J9YX57 407 aa5.52□□□□□ -1.53
HMG20A-204ENST00000558288 GOLGA6L10A0A0M3HER8 536 aa5.52□□□□□ -1.53
HMG20A-204ENST00000558288 H0YGN5 161 aa5.52□□□□□ -1.53
HMG20A-204ENST00000558288 PGRMC1O00264 195 aaKnown RBP5.52□□□□□ -1.53
HMG20A-204ENST00000558288 TTI1O43156 1089 aa5.52□□□□□ -1.53
HMG20A-204ENST00000558288 CAND2O75155 1236 aa5.52□□□□□ -1.53
HMG20A-204ENST00000558288 CAMTA2O94983 1202 aa5.52□□□□□ -1.53
HMG20A-204ENST00000558288 CLSTN1O94985 981 aa5.52□□□□□ -1.53
HMG20A-204ENST00000558288 LCA5LO95447 670 aa5.52□□□□□ -1.53
HMG20A-204ENST00000558288 SERPING1P05155 500 aa5.52□□□□□ -1.53
HMG20A-204ENST00000558288 MYL1P05976 194 aa5.52□□□□□ -1.53
HMG20A-204ENST00000558288 ARID4AP29374 1257 aaPredicted RBP5.52□□□□□ -1.53
HMG20A-204ENST00000558288 CTCFP49711 727 aaPredicted RBP5.52□□□□□ -1.53
HMG20A-204ENST00000558288 CTSWP56202 376 aa5.52□□□□□ -1.53
HMG20A-204ENST00000558288 LRRC41Q15345 812 aa5.52□□□□□ -1.53
HMG20A-204ENST00000558288 LETM2Q2VYF4 491 aa5.52□□□□□ -1.53
HMG20A-204ENST00000558288 GIGYF2Q6Y7W6 1299 aaKnown RBP5.52□□□□□ -1.53
HMG20A-204ENST00000558288 HEATR3Q7Z4Q2 680 aa5.52□□□□□ -1.53
HMG20A-204ENST00000558288 DAAM2Q86T65 1068 aa5.52□□□□□ -1.53
HMG20A-204ENST00000558288 CCDC26Q8TAB7 109 aa5.52□□□□□ -1.53
HMG20A-204ENST00000558288 KLHL29Q96CT2 875 aa5.52□□□□□ -1.53
HMG20A-204ENST00000558288 GPR101Q96P66 508 aaPredicted RBP5.52□□□□□ -1.53
HMG20A-204ENST00000558288 ISCA1Q9BUE6 129 aa5.52□□□□□ -1.53
HMG20A-204ENST00000558288 ECT2Q9H8V3 914 aa5.52□□□□□ -1.53
HMG20A-204ENST00000558288 KANSL2Q9H9L4 492 aa5.52□□□□□ -1.53
HMG20A-204ENST00000558288 EBF2Q9HAK2 575 aa5.52□□□□□ -1.53
HMG20A-204ENST00000558288 NOC2LQ9Y3T9 749 aaKnown RBP5.52□□□□□ -1.53
HMG20A-204ENST00000558288 NFS1Q9Y697 457 aa5.52□□□□□ -1.53
HMG20A-204ENST00000558288 PAPPAQ13219 1627 aa5.52□□□□□ -1.53
HMG20A-204ENST00000558288 ZNF541Q9H0D2 1346 aa5.51□□□□□ -1.53
HMG20A-204ENST00000558288 A0A087X0T9 212 aa5.51□□□□□ -1.53
HMG20A-204ENST00000558288 SSU72P8A0A1W2PR75 194 aa5.51□□□□□ -1.53
HMG20A-204ENST00000558288 CFAP73A6NFT4 308 aa5.51□□□□□ -1.53
HMG20A-204ENST00000558288 A8MUI8 341 aa5.51□□□□□ -1.53
HMG20A-204ENST00000558288 IGF2BP3O00425 579 aaKnown RBP eCLIP5.51□□□□□ -1.53
HMG20A-204ENST00000558288 IRS4O14654 1257 aaPredicted RBP5.51□□□□□ -1.53
HMG20A-204ENST00000558288 PPEF1O14829 653 aaPredicted RBP5.51□□□□□ -1.53
HMG20A-204ENST00000558288 RGS16O15492 202 aaPredicted RBP5.51□□□□□ -1.53
HMG20A-204ENST00000558288 EVI5O60447 810 aa5.51□□□□□ -1.53
HMG20A-204ENST00000558288 FAM228BP0C875 321 aa5.51□□□□□ -1.53
HMG20A-204ENST00000558288 PPP1R2P41236 205 aa5.51□□□□□ -1.53
HMG20A-204ENST00000558288 TECP42680 631 aa5.51□□□□□ -1.53
HMG20A-204ENST00000558288 SLCO1A2P46721 670 aa5.51□□□□□ -1.53
HMG20A-204ENST00000558288 BCAMP50895 628 aa5.51□□□□□ -1.53
HMG20A-204ENST00000558288 LACTBP83111 547 aaPredicted RBP5.51□□□□□ -1.53
HMG20A-204ENST00000558288 TROAPQ12815 778 aa5.51□□□□□ -1.53
HMG20A-204ENST00000558288 MKRN3Q13064 507 aaKnown RBP5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms