RNA–Protein interactions for RNA: ENST00000556009.5

NPC2-208, Transcript of NPC intracellular cholesterol transporter 2, humanhuman

TSL 5

Gene NPC2, Length 699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC2-208ENST00000556009 PTCRAQ6ISU1 281 aaPredicted RBP20.19■□□□□ 0.82
NPC2-208ENST00000556009 RTN4RL1Q86UN2 441 aaPredicted RBP20.19■□□□□ 0.82
NPC2-208ENST00000556009 ZBTB10Q96DT7 871 aa20.19■□□□□ 0.82
NPC2-208ENST00000556009 PGBD1Q96JS3 809 aa20.19■□□□□ 0.82
NPC2-208ENST00000556009 C11orf84Q9BUA3 381 aaPredicted RBP20.19■□□□□ 0.82
NPC2-208ENST00000556009 FAM49AQ9H0Q0 323 aaPredicted RBP20.19■□□□□ 0.82
NPC2-208ENST00000556009 TRPC6Q9Y210 931 aa20.19■□□□□ 0.82
NPC2-208ENST00000556009 TRPV2Q9Y5S1 764 aa20.19■□□□□ 0.82
NPC2-208ENST00000556009 KDM3AQ9Y4C1 1321 aa20.19■□□□□ 0.82
NPC2-208ENST00000556009 KLF18A0A0U1RQI7 1052 aa20.18■□□□□ 0.82
NPC2-208ENST00000556009 SMIM35A0A1B0GVV1 85 aa20.18■□□□□ 0.82
NPC2-208ENST00000556009 POTEB3A0JP26 581 aa20.18■□□□□ 0.82
NPC2-208ENST00000556009 GOLGA8AA7E2F4 631 aa20.18■□□□□ 0.82
NPC2-208ENST00000556009 GOLGA8BA8MQT2 603 aa20.18■□□□□ 0.82
NPC2-208ENST00000556009 M0QZ92 97 aa20.18■□□□□ 0.82
NPC2-208ENST00000556009 CDC27P30260 824 aa20.18■□□□□ 0.82
NPC2-208ENST00000556009 CD52P31358 61 aa20.18■□□□□ 0.82
NPC2-208ENST00000556009 MCTP2Q6DN12 878 aa20.18■□□□□ 0.82
NPC2-208ENST00000556009 POTEBQ6S5H4 581 aa20.18■□□□□ 0.82
NPC2-208ENST00000556009 ABHD15Q6UXT9 468 aa20.18■□□□□ 0.82
NPC2-208ENST00000556009 GJD3Q8N144 294 aa20.18■□□□□ 0.82
NPC2-208ENST00000556009 CRYGNQ8WXF5 182 aa20.18■□□□□ 0.82
NPC2-208ENST00000556009 LRFN3Q9BTN0 628 aa20.18■□□□□ 0.82
NPC2-208ENST00000556009 PLVAPQ9BX97 442 aa20.18■□□□□ 0.82
NPC2-208ENST00000556009 CELF4Q9BZC1 486 aaKnown RBP20.18■□□□□ 0.82
NPC2-208ENST00000556009 TMEM260Q9NX78 707 aa20.18■□□□□ 0.82
NPC2-208ENST00000556009 CCDC196A0A1B0GTZ2 297 aa20.17■□□□□ 0.82
NPC2-208ENST00000556009 GPR37L1O60883 481 aa20.17■□□□□ 0.82
NPC2-208ENST00000556009 CDC45O75419 566 aa20.17■□□□□ 0.82
NPC2-208ENST00000556009 CYP3A4P08684 503 aa20.17■□□□□ 0.82
NPC2-208ENST00000556009 BTG3Q14201 252 aaPredicted RBP20.17■□□□□ 0.82
NPC2-208ENST00000556009 PFKFB3Q16875 520 aaPredicted RBP20.17■□□□□ 0.82
NPC2-208ENST00000556009 TMEM31Q5JXX7 168 aa20.17■□□□□ 0.82
NPC2-208ENST00000556009 MTHFD1LQ6UB35 978 aa20.17■□□□□ 0.82
NPC2-208ENST00000556009 LINC01599Q8WXQ3 324 aa20.17■□□□□ 0.82
NPC2-208ENST00000556009 KCNB2Q92953 911 aa20.17■□□□□ 0.82
NPC2-208ENST00000556009 C11orf16Q9NQ32 467 aa20.17■□□□□ 0.82
NPC2-208ENST00000556009 PADI3Q9ULW8 664 aa20.17■□□□□ 0.82
NPC2-208ENST00000556009 ARIH1Q9Y4X5 557 aaPredicted RBP20.17■□□□□ 0.82
NPC2-208ENST00000556009 IGSF9BQ9UPX0 1349 aa20.17■□□□□ 0.82
NPC2-208ENST00000556009 PLXNA4Q9HCM2 1894 aa20.16■□□□□ 0.82
NPC2-208ENST00000556009 MYH9P35579 1960 aaKnown RBP20.16■□□□□ 0.82
NPC2-208ENST00000556009 GRM6O15303 877 aa20.16■□□□□ 0.82
NPC2-208ENST00000556009 DHX15O43143 795 aaKnown RBP20.16■□□□□ 0.82
NPC2-208ENST00000556009 HBP1O60381 514 aa20.16■□□□□ 0.82
NPC2-208ENST00000556009 CCNE2O96020 404 aa20.16■□□□□ 0.82
NPC2-208ENST00000556009 IL9P15248 144 aa20.16■□□□□ 0.82
NPC2-208ENST00000556009 ADD1P35611 737 aaKnown RBP20.16■□□□□ 0.82
NPC2-208ENST00000556009 ZNF76P36508 570 aa20.16■□□□□ 0.82
NPC2-208ENST00000556009 NAALADL2Q58DX5 795 aa20.16■□□□□ 0.82
NPC2-208ENST00000556009 SKAP1Q86WV1 359 aa20.16■□□□□ 0.82
NPC2-208ENST00000556009 NPAS4Q8IUM7 802 aa20.16■□□□□ 0.82
NPC2-208ENST00000556009 CMTR2Q8IYT2 770 aaKnown RBP20.16■□□□□ 0.82
NPC2-208ENST00000556009 TRAPPC12Q8WVT3 735 aa20.16■□□□□ 0.82
NPC2-208ENST00000556009 P2RX5Q93086 422 aa20.16■□□□□ 0.82
NPC2-208ENST00000556009 C5orf42Q9H799 3197 aa20.15■□□□□ 0.82
NPC2-208ENST00000556009 IGLV3-22A0A075B6J6 115 aa20.15■□□□□ 0.82
NPC2-208ENST00000556009 ESYT2A0FGR8 921 aa20.15■□□□□ 0.82
NPC2-208ENST00000556009 FAM86B1E9PN63 330 aa20.15■□□□□ 0.82
NPC2-208ENST00000556009 H3BQ06 376 aaPredicted RBP20.15■□□□□ 0.82
NPC2-208ENST00000556009 FAM86B2P0C5J1 330 aa20.15■□□□□ 0.82
NPC2-208ENST00000556009 STAG3L1P0CL83 205 aa20.15■□□□□ 0.82
NPC2-208ENST00000556009 KLRC1P26715 233 aa20.15■□□□□ 0.82
NPC2-208ENST00000556009 KRT76Q01546 638 aa20.15■□□□□ 0.82
NPC2-208ENST00000556009 CTC1Q2NKJ3 1217 aa20.15■□□□□ 0.82
NPC2-208ENST00000556009 FAM160B1Q5W0V3 765 aa20.15■□□□□ 0.82
NPC2-208ENST00000556009 FBXL16Q8N461 479 aa20.15■□□□□ 0.82
NPC2-208ENST00000556009 ATP8B4Q8TF62 1192 aa20.15■□□□□ 0.82
NPC2-208ENST00000556009 CCDC136Q96JN2 1154 aa20.15■□□□□ 0.82
NPC2-208ENST00000556009 ZMYND12Q9H0C1 365 aa20.15■□□□□ 0.82
NPC2-208ENST00000556009 PPP4R2Q9NY27 417 aa20.15■□□□□ 0.82
NPC2-208ENST00000556009 FAM50BQ9Y247 325 aa20.15■□□□□ 0.82
NPC2-208ENST00000556009 FNDC1Q4ZHG4 1894 aaPredicted RBP20.15■□□□□ 0.82
NPC2-208ENST00000556009 COL1A2P08123 1366 aa20.14■□□□□ 0.81
NPC2-208ENST00000556009 SCG2P13521 617 aa20.14■□□□□ 0.81
NPC2-208ENST00000556009 METAP2P50579 478 aaKnown RBP eCLIP20.14■□□□□ 0.81
NPC2-208ENST00000556009 TMEM62Q0P6H9 643 aa20.14■□□□□ 0.81
NPC2-208ENST00000556009 PAK2Q13177 524 aa20.14■□□□□ 0.81
NPC2-208ENST00000556009 ZNF484Q5JVG2 852 aa20.14■□□□□ 0.81
NPC2-208ENST00000556009 PLA2G4DQ86XP0 818 aa20.14■□□□□ 0.81
NPC2-208ENST00000556009 TBC1D22BQ9NU19 505 aa20.14■□□□□ 0.81
NPC2-208ENST00000556009 PLAGL2Q9UPG8 496 aa20.14■□□□□ 0.81
NPC2-208ENST00000556009 FAM86C2PA6NEL3 165 aa20.13■□□□□ 0.81
NPC2-208ENST00000556009 IPO5O00410 1097 aaKnown RBP20.13■□□□□ 0.81
NPC2-208ENST00000556009 BACH1O14867 736 aa20.13■□□□□ 0.81
NPC2-208ENST00000556009 MMP1P03956 469 aa20.13■□□□□ 0.81
NPC2-208ENST00000556009 LTBRP36941 435 aa20.13■□□□□ 0.81
NPC2-208ENST00000556009 PLA2G5P39877 138 aa20.13■□□□□ 0.81
NPC2-208ENST00000556009 FGD1P98174 961 aa20.13■□□□□ 0.81
NPC2-208ENST00000556009 JAKMIP3Q5VZ66 844 aa20.13■□□□□ 0.81
NPC2-208ENST00000556009 MIS18BP1Q6P0N0 1132 aa20.13■□□□□ 0.81
NPC2-208ENST00000556009 CCDC60Q8IWA6 550 aaPredicted RBP20.13■□□□□ 0.81
NPC2-208ENST00000556009 KIAA0319LQ8IZA0 1049 aa20.13■□□□□ 0.81
NPC2-208ENST00000556009 CCDC12Q8WUD4 166 aaPredicted RBP20.13■□□□□ 0.81
NPC2-208ENST00000556009 C6orf50Q9HD87 102 aa20.13■□□□□ 0.81
NPC2-208ENST00000556009 ZNF302Q9NR11 478 aa20.13■□□□□ 0.81
NPC2-208ENST00000556009 CLDND1Q9NY35 253 aa20.13■□□□□ 0.81
NPC2-208ENST00000556009 PRKAG3Q9UGI9 489 aa20.13■□□□□ 0.81
NPC2-208ENST00000556009 PRPF3O43395 683 aaKnown RBP20.12■□□□□ 0.81
NPC2-208ENST00000556009 ATP4AP20648 1035 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms