RNA–Protein interactions for RNA: ENST00000554508.5

ACTN1-213, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 585 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-213ENST00000554508 CCDC60Q8IWA6 550 aaPredicted RBP9.88□□□□□ -0.83
ACTN1-213ENST00000554508 USP38Q8NB14 1042 aa9.88□□□□□ -0.83
ACTN1-213ENST00000554508 TBCKQ8TEA7 893 aa9.88□□□□□ -0.83
ACTN1-213ENST00000554508 ATP8B4Q8TF62 1192 aa9.88□□□□□ -0.83
ACTN1-213ENST00000554508 WASF1Q92558 559 aa9.88□□□□□ -0.83
ACTN1-213ENST00000554508 LENG9Q96B70 501 aa9.88□□□□□ -0.83
ACTN1-213ENST00000554508 RIT2Q99578 217 aa9.88□□□□□ -0.83
ACTN1-213ENST00000554508 IFIH1Q9BYX4 1025 aaKnown RBP9.88□□□□□ -0.83
ACTN1-213ENST00000554508 TPCN1Q9ULQ1 816 aa9.88□□□□□ -0.83
ACTN1-213ENST00000554508 PCDHA10Q9Y5I2 948 aa9.88□□□□□ -0.83
ACTN1-213ENST00000554508 MAFBQ9Y5Q3 323 aaPredicted RBP9.88□□□□□ -0.83
ACTN1-213ENST00000554508 NLRC5Q86WI3 1866 aa9.87□□□□□ -0.83
ACTN1-213ENST00000554508 CHD9Q3L8U1 2897 aa9.87□□□□□ -0.83
ACTN1-213ENST00000554508 WDR64B1ANS9 1081 aa9.87□□□□□ -0.83
ACTN1-213ENST00000554508 M0QZ92 97 aa9.87□□□□□ -0.83
ACTN1-213ENST00000554508 MSH4O15457 936 aa9.87□□□□□ -0.83
ACTN1-213ENST00000554508 GTPBP6O43824 516 aaPredicted RBP9.87□□□□□ -0.83
ACTN1-213ENST00000554508 EDIL3O43854 480 aa9.87□□□□□ -0.83
ACTN1-213ENST00000554508 HTRA4P83105 476 aaPredicted RBP9.87□□□□□ -0.83
ACTN1-213ENST00000554508 NONOQ15233 471 aaKnown RBP eCLIP9.87□□□□□ -0.83
ACTN1-213ENST00000554508 FBXO47Q5MNV8 452 aa9.87□□□□□ -0.83
ACTN1-213ENST00000554508 MTHFD1LQ6UB35 978 aa9.87□□□□□ -0.83
ACTN1-213ENST00000554508 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.87□□□□□ -0.836e-6■□□□□ 8.2
ACTN1-213ENST00000554508 KRT25Q7Z3Z0 450 aa9.87□□□□□ -0.83
ACTN1-213ENST00000554508 MYOCDQ8IZQ8 938 aa9.87□□□□□ -0.83
ACTN1-213ENST00000554508 BBXQ8WY36 941 aaPredicted RBP9.87□□□□□ -0.83
ACTN1-213ENST00000554508 SLC5A5Q92911 643 aa9.87□□□□□ -0.83
ACTN1-213ENST00000554508 TOP1MTQ969P6 601 aa9.87□□□□□ -0.83
ACTN1-213ENST00000554508 FAM167AQ96KS9 214 aa9.87□□□□□ -0.83
ACTN1-213ENST00000554508 PHF20Q9BVI0 1012 aa9.87□□□□□ -0.83
ACTN1-213ENST00000554508 TEKT3Q9BXF9 490 aa9.87□□□□□ -0.83
ACTN1-213ENST00000554508 CDY2AQ9Y6F7 541 aa9.87□□□□□ -0.83
ACTN1-213ENST00000554508 KDM3AQ9Y4C1 1321 aa9.86□□□□□ -0.83
ACTN1-213ENST00000554508 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.86□□□□□ -0.83
ACTN1-213ENST00000554508 LCHNA4D1U4 455 aa9.86□□□□□ -0.83
ACTN1-213ENST00000554508 DLL1O00548 723 aa9.86□□□□□ -0.83
ACTN1-213ENST00000554508 GAS7O60861 476 aa9.86□□□□□ -0.83
ACTN1-213ENST00000554508 GHRP10912 638 aa9.86□□□□□ -0.83
ACTN1-213ENST00000554508 ATP4AP20648 1035 aa9.86□□□□□ -0.83
ACTN1-213ENST00000554508 KLRC1P26715 233 aa9.86□□□□□ -0.83
ACTN1-213ENST00000554508 SFNP31947 248 aa9.86□□□□□ -0.83
ACTN1-213ENST00000554508 NEK4P51957 841 aa9.86□□□□□ -0.83
ACTN1-213ENST00000554508 JAK3P52333 1124 aa9.86□□□□□ -0.83
ACTN1-213ENST00000554508 ERVK-21P61565 698 aa9.86□□□□□ -0.83
ACTN1-213ENST00000554508 LPIN1Q14693 890 aa9.86□□□□□ -0.83
ACTN1-213ENST00000554508 NPY5RQ15761 445 aa9.86□□□□□ -0.83
ACTN1-213ENST00000554508 RALGAPA2Q2PPJ7 1873 aa9.86□□□□□ -0.83
ACTN1-213ENST00000554508 FAM117BQ6P1L5 589 aa9.86□□□□□ -0.83
ACTN1-213ENST00000554508 TSHZ1Q6ZSZ6 1077 aa9.86□□□□□ -0.83
ACTN1-213ENST00000554508 TMCO2Q7Z6W1 182 aaPredicted RBP9.86□□□□□ -0.83
ACTN1-213ENST00000554508 CKAP2LQ8IYA6 745 aa9.86□□□□□ -0.83
ACTN1-213ENST00000554508 RDM1Q8NG50 284 aa9.86□□□□□ -0.83
ACTN1-213ENST00000554508 SP7Q8TDD2 431 aaPredicted RBP9.86□□□□□ -0.83
ACTN1-213ENST00000554508 TRAPPC12Q8WVT3 735 aa9.86□□□□□ -0.83
ACTN1-213ENST00000554508 ARNTL2Q8WYA1 636 aa9.86□□□□□ -0.83
ACTN1-213ENST00000554508 MBOAT7Q96N66 472 aa9.86□□□□□ -0.83
ACTN1-213ENST00000554508 AIFM3Q96NN9 605 aa9.86□□□□□ -0.83
ACTN1-213ENST00000554508 UIMC1Q96RL1 719 aa9.86□□□□□ -0.83
ACTN1-213ENST00000554508 TGS1Q96RS0 853 aaKnown RBP9.86□□□□□ -0.83
ACTN1-213ENST00000554508 NAP1L4Q99733 375 aaKnown RBP9.86□□□□□ -0.83
ACTN1-213ENST00000554508 FTHL17Q9BXU8 183 aa9.86□□□□□ -0.83
ACTN1-213ENST00000554508 CELF4Q9BZC1 486 aaKnown RBP9.86□□□□□ -0.83
ACTN1-213ENST00000554508 OSBPL7Q9BZF2 842 aa9.86□□□□□ -0.83
ACTN1-213ENST00000554508 FAM49AQ9H0Q0 323 aaPredicted RBP9.86□□□□□ -0.83
ACTN1-213ENST00000554508 TSPYL2Q9H2G4 693 aaPredicted RBP9.86□□□□□ -0.83
ACTN1-213ENST00000554508 CERS4Q9HA82 394 aa9.86□□□□□ -0.83
ACTN1-213ENST00000554508 UPF2Q9HAU5 1272 aaKnown RBP9.86□□□□□ -0.83
ACTN1-213ENST00000554508 DISC1Q9NRI5 854 aa9.86□□□□□ -0.83
ACTN1-213ENST00000554508 NRBP2Q9NSY0 501 aa9.86□□□□□ -0.83
ACTN1-213ENST00000554508 LMCD1Q9NZU5 365 aa9.86□□□□□ -0.83
ACTN1-213ENST00000554508 ORC3Q9UBD5 711 aaPredicted RBP9.86□□□□□ -0.83
ACTN1-213ENST00000554508 GABBR1Q9UBS5 961 aa9.86□□□□□ -0.83
ACTN1-213ENST00000554508 CEP131Q9UPN4 1083 aa9.86□□□□□ -0.83
ACTN1-213ENST00000554508 SAMM50Q9Y512 469 aa9.86□□□□□ -0.83
ACTN1-213ENST00000554508 TRPV2Q9Y5S1 764 aa9.86□□□□□ -0.83
ACTN1-213ENST00000554508 CHD7Q9P2D1 2997 aa9.85□□□□□ -0.83
ACTN1-213ENST00000554508 EYSQ5T1H1 3165 aa9.85□□□□□ -0.83
ACTN1-213ENST00000554508 CCDC194A0A1B0GVG4 234 aa9.85□□□□□ -0.83
ACTN1-213ENST00000554508 LINC01553A4QN01 128 aa9.85□□□□□ -0.83
ACTN1-213ENST00000554508 ENPP3O14638 875 aa9.85□□□□□ -0.83
ACTN1-213ENST00000554508 MAGEB2O15479 319 aa9.85□□□□□ -0.83
ACTN1-213ENST00000554508 PSMD10O75832 226 aa9.85□□□□□ -0.83
ACTN1-213ENST00000554508 ARHGEF15O94989 841 aa9.85□□□□□ -0.83
ACTN1-213ENST00000554508 CTDNEP1O95476 244 aa9.85□□□□□ -0.83
ACTN1-213ENST00000554508 ME3Q16798 604 aa9.85□□□□□ -0.83
ACTN1-213ENST00000554508 INF2Q27J81 1249 aa9.85□□□□□ -0.83
ACTN1-213ENST00000554508 ODR4Q5SWX8 454 aa9.85□□□□□ -0.83
ACTN1-213ENST00000554508 LRCH2Q5VUJ6 765 aa9.85□□□□□ -0.83
ACTN1-213ENST00000554508 PPP4R3AQ6IN85 833 aa9.85□□□□□ -0.83
ACTN1-213ENST00000554508 ZNF710Q8N1W2 664 aa9.85□□□□□ -0.83
ACTN1-213ENST00000554508 PPM1EQ8WY54 764 aa9.85□□□□□ -0.83
ACTN1-213ENST00000554508 GTF3C6Q969F1 213 aa9.85□□□□□ -0.83
ACTN1-213ENST00000554508 SAMD11Q96NU1 681 aa9.85□□□□□ -0.83
ACTN1-213ENST00000554508 KCNJ14Q9UNX9 436 aa9.85□□□□□ -0.83
ACTN1-213ENST00000554508 MTCH2Q9Y6C9 303 aa9.85□□□□□ -0.83
ACTN1-213ENST00000554508 UNC80Q8N2C7 3258 aa9.85□□□□□ -0.83
ACTN1-213ENST00000554508 IGSF9BQ9UPX0 1349 aa9.84□□□□□ -0.83
ACTN1-213ENST00000554508 PRUNE2Q8WUY3 3088 aa9.84□□□□□ -0.83
ACTN1-213ENST00000554508 EPOPA6NHQ4 379 aa9.84□□□□□ -0.83
ACTN1-213ENST00000554508 ZBTB42B2RXF5 422 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms