RNA–Protein interactions for RNA: ENST00000554340.1

NEMP1-204, Transcript of nuclear envelope integral membrane protein 1, humanhuman

TSL 1 (best)

Gene NEMP1, Length 1,381 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEMP1-204ENST00000554340 EPB41L2O43491 1005 aaKnown RBP23.32■■□□□ 1.32
NEMP1-204ENST00000554340 ATG7O95352 703 aa23.32■■□□□ 1.32
NEMP1-204ENST00000554340 CDC27P30260 824 aa23.32■■□□□ 1.32
NEMP1-204ENST00000554340 BMPR1AP36894 532 aa23.32■■□□□ 1.32
NEMP1-204ENST00000554340 SLC26A2P50443 739 aa23.32■■□□□ 1.32
NEMP1-204ENST00000554340 COL19A1Q14993 1142 aa23.32■■□□□ 1.32
NEMP1-204ENST00000554340 MCTP2Q6DN12 878 aa23.32■■□□□ 1.32
NEMP1-204ENST00000554340 NIPA1Q7RTP0 329 aa23.32■■□□□ 1.32
NEMP1-204ENST00000554340 CCDC12Q8WUD4 166 aaPredicted RBP23.32■■□□□ 1.32
NEMP1-204ENST00000554340 TRAPPC12Q8WVT3 735 aa23.32■■□□□ 1.32
NEMP1-204ENST00000554340 LINC01599Q8WXQ3 324 aa23.32■■□□□ 1.32
NEMP1-204ENST00000554340 CLP1Q92989 425 aaKnown RBP23.32■■□□□ 1.32
NEMP1-204ENST00000554340 ZNF689Q96CS4 500 aaPredicted RBP23.32■■□□□ 1.32
NEMP1-204ENST00000554340 C11orf84Q9BUA3 381 aaPredicted RBP23.32■■□□□ 1.32
NEMP1-204ENST00000554340 FTHL17Q9BXU8 183 aa23.32■■□□□ 1.32
NEMP1-204ENST00000554340 SNX14Q9Y5W7 946 aa23.32■■□□□ 1.32
NEMP1-204ENST00000554340 M0QZ92 97 aa23.31■■□□□ 1.32
NEMP1-204ENST00000554340 ZNF76P36508 570 aa23.31■■□□□ 1.32
NEMP1-204ENST00000554340 AKAP17AQ02040 695 aaKnown RBP23.31■■□□□ 1.32
NEMP1-204ENST00000554340 BTG3Q14201 252 aaPredicted RBP23.31■■□□□ 1.32
NEMP1-204ENST00000554340 PUS10Q3MIT2 529 aaKnown RBP23.31■■□□□ 1.32
NEMP1-204ENST00000554340 PTCRAQ6ISU1 281 aaPredicted RBP23.31■■□□□ 1.32
NEMP1-204ENST00000554340 FAM178BQ8IXR5 827 aa23.31■■□□□ 1.32
NEMP1-204ENST00000554340 BRF1Q92994 677 aa23.31■■□□□ 1.32
NEMP1-204ENST00000554340 PABPC5Q96DU9 382 aaKnown RBP23.31■■□□□ 1.32
NEMP1-204ENST00000554340 LMAN2LQ9H0V9 348 aa23.31■■□□□ 1.32
NEMP1-204ENST00000554340 CD320Q9NPF0 282 aa23.31■■□□□ 1.32
NEMP1-204ENST00000554340 IGSF9BQ9UPX0 1349 aa23.31■■□□□ 1.32
NEMP1-204ENST00000554340 IGKV6D-21A0A0A0MT36 114 aa23.3■■□□□ 1.32
NEMP1-204ENST00000554340 SMIM35A0A1B0GVV1 85 aa23.3■■□□□ 1.32
NEMP1-204ENST00000554340 POTEB3A0JP26 581 aa23.3■■□□□ 1.32
NEMP1-204ENST00000554340 DGKIO75912 1065 aa23.3■■□□□ 1.32
NEMP1-204ENST00000554340 CCNE2O96020 404 aa23.3■■□□□ 1.32
NEMP1-204ENST00000554340 TMEM62Q0P6H9 643 aa23.3■■□□□ 1.32
NEMP1-204ENST00000554340 APOBRQ0VD83 1088 aa23.3■■□□□ 1.32
NEMP1-204ENST00000554340 POTEBQ6S5H4 581 aa23.3■■□□□ 1.32
NEMP1-204ENST00000554340 FBXL16Q8N461 479 aa23.3■■□□□ 1.32
NEMP1-204ENST00000554340 KHSRPQ92945 711 aaKnown RBP eCLIP23.3■■□□□ 1.324e-7■□□□□ 11
NEMP1-204ENST00000554340 WDR81Q562E7 1941 aa23.3■■□□□ 1.32
NEMP1-204ENST00000554340 KDM3AQ9Y4C1 1321 aa23.3■■□□□ 1.32
NEMP1-204ENST00000554340 GRXCR2A6NFK2 248 aa23.29■■□□□ 1.32
NEMP1-204ENST00000554340 IL9P15248 144 aa23.29■■□□□ 1.32
NEMP1-204ENST00000554340 RPS6KB1P23443 525 aa23.29■■□□□ 1.32
NEMP1-204ENST00000554340 PFKFB3Q16875 520 aaPredicted RBP23.29■■□□□ 1.32
NEMP1-204ENST00000554340 MTHFD1LQ6UB35 978 aa23.29■■□□□ 1.32
NEMP1-204ENST00000554340 NME8Q8N427 588 aa23.29■■□□□ 1.32
NEMP1-204ENST00000554340 CELF4Q9BZC1 486 aaKnown RBP23.29■■□□□ 1.32
NEMP1-204ENST00000554340 PADI3Q9ULW8 664 aa23.29■■□□□ 1.32
NEMP1-204ENST00000554340 FAM86B1E9PN63 330 aa23.28■■□□□ 1.32
NEMP1-204ENST00000554340 H3BQ06 376 aaPredicted RBP23.28■■□□□ 1.32
NEMP1-204ENST00000554340 GRM6O15303 877 aa23.28■■□□□ 1.32
NEMP1-204ENST00000554340 FAM86B2P0C5J1 330 aa23.28■■□□□ 1.32
NEMP1-204ENST00000554340 SCG2P13521 617 aa23.28■■□□□ 1.32
NEMP1-204ENST00000554340 ADD1P35611 737 aaKnown RBP23.28■■□□□ 1.32
NEMP1-204ENST00000554340 PAK2Q13177 524 aa23.28■■□□□ 1.32
NEMP1-204ENST00000554340 JAKMIP3Q5VZ66 844 aa23.28■■□□□ 1.32
NEMP1-204ENST00000554340 ABHD15Q6UXT9 468 aa23.28■■□□□ 1.32
NEMP1-204ENST00000554340 RTN4RL1Q86UN2 441 aaPredicted RBP23.28■■□□□ 1.32
NEMP1-204ENST00000554340 PLA2G4DQ86XP0 818 aa23.28■■□□□ 1.32
NEMP1-204ENST00000554340 NPAS4Q8IUM7 802 aa23.28■■□□□ 1.32
NEMP1-204ENST00000554340 CRIPAKQ8N1N5 446 aa23.28■■□□□ 1.32
NEMP1-204ENST00000554340 CRYGNQ8WXF5 182 aa23.28■■□□□ 1.32
NEMP1-204ENST00000554340 LRFN3Q9BTN0 628 aa23.28■■□□□ 1.32
NEMP1-204ENST00000554340 C6orf50Q9HD87 102 aa23.28■■□□□ 1.32
NEMP1-204ENST00000554340 COL1A2P08123 1366 aa23.28■■□□□ 1.32
NEMP1-204ENST00000554340 IGLV3-22A0A075B6J6 115 aa23.27■■□□□ 1.32
NEMP1-204ENST00000554340 ESYT2A0FGR8 921 aa23.27■■□□□ 1.32
NEMP1-204ENST00000554340 DDX39AO00148 427 aaKnown RBP23.27■■□□□ 1.32
NEMP1-204ENST00000554340 BACH1O14867 736 aa23.27■■□□□ 1.32
NEMP1-204ENST00000554340 NCK2O43639 380 aa23.27■■□□□ 1.32
NEMP1-204ENST00000554340 CYP3A4P08684 503 aa23.27■■□□□ 1.32
NEMP1-204ENST00000554340 CPA1P15085 419 aa23.27■■□□□ 1.32
NEMP1-204ENST00000554340 KRT76Q01546 638 aa23.27■■□□□ 1.32
NEMP1-204ENST00000554340 TMEM31Q5JXX7 168 aa23.27■■□□□ 1.32
NEMP1-204ENST00000554340 FAM160B1Q5W0V3 765 aa23.27■■□□□ 1.32
NEMP1-204ENST00000554340 CMTR2Q8IYT2 770 aaKnown RBP23.27■■□□□ 1.32
NEMP1-204ENST00000554340 GJD3Q8N144 294 aa23.27■■□□□ 1.32
NEMP1-204ENST00000554340 ATP8B4Q8TF62 1192 aa23.27■■□□□ 1.32
NEMP1-204ENST00000554340 PLVAPQ9BX97 442 aa23.27■■□□□ 1.32
NEMP1-204ENST00000554340 NID2Q14112 1375 aa23.27■■□□□ 1.32
NEMP1-204ENST00000554340 PI4K2BG5E9Z4 385 aa23.27■■□□□ 1.31
NEMP1-204ENST00000554340 DHX15O43143 795 aaKnown RBP23.27■■□□□ 1.31
NEMP1-204ENST00000554340 HBP1O60381 514 aa23.27■■□□□ 1.31
NEMP1-204ENST00000554340 GNA11P29992 359 aa23.27■■□□□ 1.31
NEMP1-204ENST00000554340 CCDC60Q8IWA6 550 aaPredicted RBP23.27■■□□□ 1.31
NEMP1-204ENST00000554340 ZMYND12Q9H0C1 365 aa23.27■■□□□ 1.31
NEMP1-204ENST00000554340 IPO5O00410 1097 aaKnown RBP23.26■■□□□ 1.31
NEMP1-204ENST00000554340 PRPF3O43395 683 aaKnown RBP23.26■■□□□ 1.31
NEMP1-204ENST00000554340 MMP1P03956 469 aa23.26■■□□□ 1.31
NEMP1-204ENST00000554340 STAG3L1P0CL83 205 aa23.26■■□□□ 1.31
NEMP1-204ENST00000554340 KLRC1P26715 233 aa23.26■■□□□ 1.31
NEMP1-204ENST00000554340 MIS18BP1Q6P0N0 1132 aa23.26■■□□□ 1.31
NEMP1-204ENST00000554340 FAM43BQ6ZT52 329 aaPredicted RBP23.26■■□□□ 1.31
NEMP1-204ENST00000554340 EP400NLQ6ZTU2 488 aa23.26■■□□□ 1.31
NEMP1-204ENST00000554340 ZNF302Q9NR11 478 aa23.26■■□□□ 1.31
NEMP1-204ENST00000554340 CLDND1Q9NY35 253 aa23.26■■□□□ 1.31
NEMP1-204ENST00000554340 FAM50BQ9Y247 325 aa23.26■■□□□ 1.31
NEMP1-204ENST00000554340 MRPL42Q9Y6G3 142 aaKnown RBP23.26■■□□□ 1.31
NEMP1-204ENST00000554340 FNDC1Q4ZHG4 1894 aaPredicted RBP23.25■■□□□ 1.31
NEMP1-204ENST00000554340 GPR37L1O60883 481 aa23.25■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms