RNA–Protein interactions for RNA: ENST00000516405.1

RNU6-542P-201, Transcript of RNA, U6 small nuclear 542, pseudogene, humanhuman

BASIC

Gene RNU6-542P, Length 103 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-542P-201ENST00000516405 CKBP12277 381 aa0.33□□□□□ -2.36
RNU6-542P-201ENST00000516405 GLRBP48167 497 aa0.33□□□□□ -2.36
RNU6-542P-201ENST00000516405 JAM2P57087 298 aa0.33□□□□□ -2.36
RNU6-542P-201ENST00000516405 RPL6Q02878 288 aaKnown RBP0.33□□□□□ -2.36
RNU6-542P-201ENST00000516405 HGFACQ04756 655 aa0.33□□□□□ -2.36
RNU6-542P-201ENST00000516405 SEMA3AQ14563 771 aa0.33□□□□□ -2.36
RNU6-542P-201ENST00000516405 OTUD3Q5T2D3 398 aaPredicted RBP0.33□□□□□ -2.36
RNU6-542P-201ENST00000516405 USP30Q70CQ3 517 aa0.33□□□□□ -2.36
RNU6-542P-201ENST00000516405 PTF1AQ7RTS3 328 aa0.33□□□□□ -2.36
RNU6-542P-201ENST00000516405 CPNE8Q86YQ8 564 aa0.33□□□□□ -2.36
RNU6-542P-201ENST00000516405 SLITRK4Q8IW52 837 aa0.33□□□□□ -2.36
RNU6-542P-201ENST00000516405 RGS22Q8NE09 1264 aa0.33□□□□□ -2.36
RNU6-542P-201ENST00000516405 CPT1CQ8TCG5 803 aa0.33□□□□□ -2.36
RNU6-542P-201ENST00000516405 GTF3C2Q8WUA4 911 aaPredicted RBP0.33□□□□□ -2.36
RNU6-542P-201ENST00000516405 DPF3Q92784 378 aa0.33□□□□□ -2.36
RNU6-542P-201ENST00000516405 HMCESQ96FZ2 354 aa0.33□□□□□ -2.36
RNU6-542P-201ENST00000516405 LYZL4Q96KX0 146 aa0.33□□□□□ -2.36
RNU6-542P-201ENST00000516405 ASB6Q9NWX5 421 aa0.33□□□□□ -2.36
RNU6-542P-201ENST00000516405 TMEM260Q9NX78 707 aa0.33□□□□□ -2.36
RNU6-542P-201ENST00000516405 FLRT1Q9NZU1 646 aa0.33□□□□□ -2.36
RNU6-542P-201ENST00000516405 REV1Q9UBZ9 1251 aa0.33□□□□□ -2.36
RNU6-542P-201ENST00000516405 FBXL21Q9UKT6 434 aa0.33□□□□□ -2.36
RNU6-542P-201ENST00000516405 C7orf72A4D263 438 aa0.32□□□□□ -2.36
RNU6-542P-201ENST00000516405 ANTXRLA6NF34 631 aa0.32□□□□□ -2.36
RNU6-542P-201ENST00000516405 MYMKA6NI61 221 aa0.32□□□□□ -2.36
RNU6-542P-201ENST00000516405 C4orf47A7E2U8 309 aa0.32□□□□□ -2.36
RNU6-542P-201ENST00000516405 AHRRA9YTQ3 701 aa0.32□□□□□ -2.36
RNU6-542P-201ENST00000516405 CBFA2T3O75081 653 aa0.32□□□□□ -2.36
RNU6-542P-201ENST00000516405 FBXO21O94952 628 aa0.32□□□□□ -2.36
RNU6-542P-201ENST00000516405 HTR6P50406 440 aa0.32□□□□□ -2.36
RNU6-542P-201ENST00000516405 CHMP4BP1P59074 171 aa0.32□□□□□ -2.36
RNU6-542P-201ENST00000516405 ELAVL1Q15717 326 aaKnown RBP0.32□□□□□ -2.36
RNU6-542P-201ENST00000516405 MRGPRG-AS1Q2M3A8 158 aa0.32□□□□□ -2.36
RNU6-542P-201ENST00000516405 MORN5Q5VZ52 161 aa0.32□□□□□ -2.36
RNU6-542P-201ENST00000516405 TTBK2Q6IQ55 1244 aa0.32□□□□□ -2.36
RNU6-542P-201ENST00000516405 OR14K1Q8NGZ2 314 aa0.32□□□□□ -2.36
RNU6-542P-201ENST00000516405 DENND1AQ8TEH3 1009 aa0.32□□□□□ -2.36
RNU6-542P-201ENST00000516405 HASPINQ8TF76 798 aa0.32□□□□□ -2.36
RNU6-542P-201ENST00000516405 NSMCE1Q8WV22 266 aa0.32□□□□□ -2.36
RNU6-542P-201ENST00000516405 SLC9A6Q92581 669 aa0.32□□□□□ -2.36
RNU6-542P-201ENST00000516405 DDX17Q92841 729 aaKnown RBP0.32□□□□□ -2.36
RNU6-542P-201ENST00000516405 SCYL1Q96KG9 808 aa0.32□□□□□ -2.36
RNU6-542P-201ENST00000516405 LMLNQ96KR4 655 aa0.32□□□□□ -2.36
RNU6-542P-201ENST00000516405 HIPK2Q9H2X6 1198 aa0.32□□□□□ -2.36
RNU6-542P-201ENST00000516405 GJB4Q9NTQ9 266 aa0.32□□□□□ -2.36
RNU6-542P-201ENST00000516405 HSPBP1Q9NZL4 362 aa0.32□□□□□ -2.36
RNU6-542P-201ENST00000516405 SORCS3Q9UPU3 1222 aa0.32□□□□□ -2.36
RNU6-542P-201ENST00000516405 PCDHB12Q9Y5F1 795 aa0.32□□□□□ -2.36
RNU6-542P-201ENST00000516405 PRR36Q9H6K5 1346 aa0.32□□□□□ -2.36
RNU6-542P-201ENST00000516405 PRRC2AP48634 2157 aaKnown RBP0.31□□□□□ -2.36
RNU6-542P-201ENST00000516405 TCRBV5S2A0A599 114 aa0.31□□□□□ -2.36
RNU6-542P-201ENST00000516405 ESYT3A0FGR9 886 aa0.31□□□□□ -2.36
RNU6-542P-201ENST00000516405 PMS2P1A4D2B8 440 aa0.31□□□□□ -2.36
RNU6-542P-201ENST00000516405 SHOXO15266 292 aa0.31□□□□□ -2.36
RNU6-542P-201ENST00000516405 CUTAO60888 179 aa0.31□□□□□ -2.36
RNU6-542P-201ENST00000516405 FAM13AO94988 1023 aa0.31□□□□□ -2.36
RNU6-542P-201ENST00000516405 PRKCGP05129 697 aa0.31□□□□□ -2.36
RNU6-542P-201ENST00000516405 POLR2BP30876 1174 aaKnown RBP0.31□□□□□ -2.36
RNU6-542P-201ENST00000516405 SMAD3P84022 425 aaKnown RBP0.31□□□□□ -2.36
RNU6-542P-201ENST00000516405 MPP3Q13368 585 aa0.31□□□□□ -2.36
RNU6-542P-201ENST00000516405 RIN1Q13671 783 aa0.31□□□□□ -2.36
RNU6-542P-201ENST00000516405 AUHQ13825 339 aaKnown RBP0.31□□□□□ -2.36
RNU6-542P-201ENST00000516405 MCM6Q14566 821 aa0.31□□□□□ -2.36
RNU6-542P-201ENST00000516405 SKIDA1Q1XH10 827 aa0.31□□□□□ -2.36
RNU6-542P-201ENST00000516405 CWF19L1Q69YN2 538 aaKnown RBP0.31□□□□□ -2.36
RNU6-542P-201ENST00000516405 IRF2BP2Q7Z5L9 587 aa0.31□□□□□ -2.36
RNU6-542P-201ENST00000516405 KRT73Q86Y46 540 aa0.31□□□□□ -2.36
RNU6-542P-201ENST00000516405 MICAL1Q8TDZ2 1067 aa0.31□□□□□ -2.36
RNU6-542P-201ENST00000516405 ANKRD24Q8TF21 1146 aa0.31□□□□□ -2.36
RNU6-542P-201ENST00000516405 NKD1Q969G9 470 aa0.31□□□□□ -2.36
RNU6-542P-201ENST00000516405 SLITRK1Q96PX8 696 aa0.31□□□□□ -2.36
RNU6-542P-201ENST00000516405 MCMBPQ9BTE3 642 aa0.31□□□□□ -2.36
RNU6-542P-201ENST00000516405 DSCC1Q9BVC3 393 aa0.31□□□□□ -2.36
RNU6-542P-201ENST00000516405 IL17RBQ9NRM6 502 aa0.31□□□□□ -2.36
RNU6-542P-201ENST00000516405 PRR13Q9NZ81 148 aa0.31□□□□□ -2.36
RNU6-542P-201ENST00000516405 FOXJ2Q9P0K8 574 aa0.31□□□□□ -2.36
RNU6-542P-201ENST00000516405 MARCH2Q9P0N8 246 aa0.31□□□□□ -2.36
RNU6-542P-201ENST00000516405 PPM1HQ9ULR3 514 aa0.31□□□□□ -2.36
RNU6-542P-201ENST00000516405 SMAD5-AS1Q9Y6J3 95 aa0.31□□□□□ -2.36
RNU6-542P-201ENST00000516405 LINC01565O15544 149 aa0.3□□□□□ -2.36
RNU6-542P-201ENST00000516405 SCAF4O95104 1147 aaKnown RBP0.3□□□□□ -2.36
RNU6-542P-201ENST00000516405 ETV4P43268 484 aa0.3□□□□□ -2.36
RNU6-542P-201ENST00000516405 NOP2P46087 812 aaKnown RBP0.3□□□□□ -2.36
RNU6-542P-201ENST00000516405 BMT2Q1RMZ1 405 aa0.3□□□□□ -2.36
RNU6-542P-201ENST00000516405 TSNAXIP1Q2TAA8 658 aa0.3□□□□□ -2.36
RNU6-542P-201ENST00000516405 ZNF585BQ52M93 769 aa0.3□□□□□ -2.36
RNU6-542P-201ENST00000516405 MBLAC2Q68D91 279 aa0.3□□□□□ -2.36
RNU6-542P-201ENST00000516405 VASNQ6EMK4 673 aa0.3□□□□□ -2.36
RNU6-542P-201ENST00000516405 TEX2Q8IWB9 1127 aa0.3□□□□□ -2.36
RNU6-542P-201ENST00000516405 WWC1Q8IX03 1113 aa0.3□□□□□ -2.36
RNU6-542P-201ENST00000516405 ZNF843Q8N446 348 aa0.3□□□□□ -2.36
RNU6-542P-201ENST00000516405 SLC44A3Q8N4M1 653 aa0.3□□□□□ -2.36
RNU6-542P-201ENST00000516405 FBXO41Q8TF61 875 aa0.3□□□□□ -2.36
RNU6-542P-201ENST00000516405 WIPF2Q8TF74 440 aaPredicted RBP0.3□□□□□ -2.36
RNU6-542P-201ENST00000516405 ATXN2LQ8WWM7 1075 aaKnown RBP0.3□□□□□ -2.36
RNU6-542P-201ENST00000516405 ASB10Q8WXI3 467 aa0.3□□□□□ -2.36
RNU6-542P-201ENST00000516405 CLP1Q92989 425 aaKnown RBP0.3□□□□□ -2.36
RNU6-542P-201ENST00000516405 GLMNQ92990 594 aa0.3□□□□□ -2.36
RNU6-542P-201ENST00000516405 TACO1Q9BSH4 297 aaKnown RBP0.3□□□□□ -2.36
RNU6-542P-201ENST00000516405 C1QTNF5Q9BXJ0 243 aa0.3□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms