RNA–Protein interactions for RNA: ENST00000505522.4

SNHG4-202, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 1 (best)

Gene SNHG4, Length 629 nt, Biotype processed transcript, Subcellular localisation Nucleoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-202ENST00000505522 HMGB1P09429 215 aaKnown RBP13.91□□□□□ -0.18
SNHG4-202ENST00000505522 IL9P15248 144 aa13.91□□□□□ -0.18
SNHG4-202ENST00000505522 METAP2P50579 478 aaKnown RBP eCLIP13.91□□□□□ -0.18
SNHG4-202ENST00000505522 PFKFB3Q16875 520 aaPredicted RBP13.91□□□□□ -0.18
SNHG4-202ENST00000505522 POTEBQ6S5H4 581 aa13.91□□□□□ -0.18
SNHG4-202ENST00000505522 MTHFD1LQ6UB35 978 aa13.91□□□□□ -0.18
SNHG4-202ENST00000505522 ABHD15Q6UXT9 468 aa13.91□□□□□ -0.18
SNHG4-202ENST00000505522 Q6ZUG5 572 aa13.91□□□□□ -0.18
SNHG4-202ENST00000505522 NIPA1Q7RTP0 329 aa13.91□□□□□ -0.18
SNHG4-202ENST00000505522 CRIPAKQ8N1N5 446 aa13.91□□□□□ -0.18
SNHG4-202ENST00000505522 NEK9Q8TD19 979 aa13.91□□□□□ -0.18
SNHG4-202ENST00000505522 CRYGNQ8WXF5 182 aa13.91□□□□□ -0.18
SNHG4-202ENST00000505522 KCNB2Q92953 911 aa13.91□□□□□ -0.18
SNHG4-202ENST00000505522 TNPO1Q92973 898 aaKnown RBP13.91□□□□□ -0.18
SNHG4-202ENST00000505522 CLP1Q92989 425 aaKnown RBP13.91□□□□□ -0.18
SNHG4-202ENST00000505522 GLT8D2Q9H1C3 349 aa13.91□□□□□ -0.18
SNHG4-202ENST00000505522 NSUN3Q9H649 340 aaKnown RBP13.91□□□□□ -0.18
SNHG4-202ENST00000505522 PADI3Q9ULW8 664 aa13.91□□□□□ -0.18
SNHG4-202ENST00000505522 ATG2AQ2TAZ0 1938 aa13.91□□□□□ -0.18
SNHG4-202ENST00000505522 IGSF9BQ9UPX0 1349 aa13.9□□□□□ -0.18
SNHG4-202ENST00000505522 LOXHD1Q8IVV2 1947 aa13.9□□□□□ -0.18
SNHG4-202ENST00000505522 TTC3P53804 2025 aa13.9□□□□□ -0.18
SNHG4-202ENST00000505522 IGLV3-22A0A075B6J6 115 aa13.9□□□□□ -0.18
SNHG4-202ENST00000505522 SMIM35A0A1B0GVV1 85 aa13.9□□□□□ -0.18
SNHG4-202ENST00000505522 GRXCR2A6NFK2 248 aa13.9□□□□□ -0.18
SNHG4-202ENST00000505522 H3BQ06 376 aaPredicted RBP13.9□□□□□ -0.18
SNHG4-202ENST00000505522 GRM6O15303 877 aa13.9□□□□□ -0.18
SNHG4-202ENST00000505522 RB1P06400 928 aa13.9□□□□□ -0.18
SNHG4-202ENST00000505522 SCG2P13521 617 aa13.9□□□□□ -0.18
SNHG4-202ENST00000505522 FGD1P98174 961 aa13.9□□□□□ -0.18
SNHG4-202ENST00000505522 BTG3Q14201 252 aaPredicted RBP13.9□□□□□ -0.18
SNHG4-202ENST00000505522 COL19A1Q14993 1142 aa13.9□□□□□ -0.18
SNHG4-202ENST00000505522 PKN1Q16512 942 aa13.9□□□□□ -0.18
SNHG4-202ENST00000505522 PTCRAQ6ISU1 281 aaPredicted RBP13.9□□□□□ -0.18
SNHG4-202ENST00000505522 PLA2G4DQ86XP0 818 aa13.9□□□□□ -0.18
SNHG4-202ENST00000505522 CCDC60Q8IWA6 550 aaPredicted RBP13.9□□□□□ -0.18
SNHG4-202ENST00000505522 FAM178BQ8IXR5 827 aa13.9□□□□□ -0.18
SNHG4-202ENST00000505522 BRF1Q92994 677 aa13.9□□□□□ -0.18
SNHG4-202ENST00000505522 PABPC5Q96DU9 382 aaKnown RBP13.9□□□□□ -0.18
SNHG4-202ENST00000505522 JAKMIP1Q96N16 626 aaKnown RBP13.9□□□□□ -0.18
SNHG4-202ENST00000505522 C11orf84Q9BUA3 381 aaPredicted RBP13.9□□□□□ -0.18
SNHG4-202ENST00000505522 CELF4Q9BZC1 486 aaKnown RBP13.9□□□□□ -0.18
SNHG4-202ENST00000505522 RWDD3Q9Y3V2 267 aa13.9□□□□□ -0.18
SNHG4-202ENST00000505522 SNX14Q9Y5W7 946 aa13.9□□□□□ -0.18
SNHG4-202ENST00000505522 ESYT2A0FGR8 921 aa13.89□□□□□ -0.19
SNHG4-202ENST00000505522 M0QZ92 97 aa13.89□□□□□ -0.19
SNHG4-202ENST00000505522 IPO5O00410 1097 aaKnown RBP13.89□□□□□ -0.19
SNHG4-202ENST00000505522 BACH1O14867 736 aa13.89□□□□□ -0.19
SNHG4-202ENST00000505522 CYP3A4P08684 503 aa13.89□□□□□ -0.19
SNHG4-202ENST00000505522 KLRC1P26715 233 aa13.89□□□□□ -0.19
SNHG4-202ENST00000505522 SLC26A2P50443 739 aa13.89□□□□□ -0.19
SNHG4-202ENST00000505522 PAK2Q13177 524 aa13.89□□□□□ -0.19
SNHG4-202ENST00000505522 TMEM266Q2M3C6 531 aa13.89□□□□□ -0.19
SNHG4-202ENST00000505522 PIAS4Q8N2W9 510 aaPredicted RBP13.89□□□□□ -0.19
SNHG4-202ENST00000505522 NME8Q8N427 588 aa13.89□□□□□ -0.19
SNHG4-202ENST00000505522 LRFN3Q9BTN0 628 aa13.89□□□□□ -0.19
SNHG4-202ENST00000505522 FTHL17Q9BXU8 183 aa13.89□□□□□ -0.19
SNHG4-202ENST00000505522 ZMYND12Q9H0C1 365 aa13.89□□□□□ -0.19
SNHG4-202ENST00000505522 TMX1Q9H3N1 280 aa13.89□□□□□ -0.19
SNHG4-202ENST00000505522 MRPL42Q9Y6G3 142 aaKnown RBP13.89□□□□□ -0.19
SNHG4-202ENST00000505522 KDM3AQ9Y4C1 1321 aa13.89□□□□□ -0.19
SNHG4-202ENST00000505522 NID2Q14112 1375 aa13.88□□□□□ -0.19
SNHG4-202ENST00000505522 CCDC196A0A1B0GTZ2 297 aa13.88□□□□□ -0.19
SNHG4-202ENST00000505522 ZBTB42B2RXF5 422 aa13.88□□□□□ -0.19
SNHG4-202ENST00000505522 PRPF3O43395 683 aaKnown RBP13.88□□□□□ -0.19
SNHG4-202ENST00000505522 HBP1O60381 514 aa13.88□□□□□ -0.19
SNHG4-202ENST00000505522 PPFIA3O75145 1194 aa13.88□□□□□ -0.19
SNHG4-202ENST00000505522 CSPG5O95196 566 aa13.88□□□□□ -0.19
SNHG4-202ENST00000505522 ATP4AP20648 1035 aa13.88□□□□□ -0.19
SNHG4-202ENST00000505522 LTBRP36941 435 aa13.88□□□□□ -0.19
SNHG4-202ENST00000505522 GATMP50440 423 aa13.88□□□□□ -0.19
SNHG4-202ENST00000505522 KRT76Q01546 638 aa13.88□□□□□ -0.19
SNHG4-202ENST00000505522 FAM160B1Q5W0V3 765 aa13.88□□□□□ -0.19
SNHG4-202ENST00000505522 SWSAP1Q6NVH7 229 aa13.88□□□□□ -0.19
SNHG4-202ENST00000505522 MIS18BP1Q6P0N0 1132 aa13.88□□□□□ -0.19
SNHG4-202ENST00000505522 PDXDC2PQ6P474 469 aa13.88□□□□□ -0.19
SNHG4-202ENST00000505522 EP400NLQ6ZTU2 488 aa13.88□□□□□ -0.19
SNHG4-202ENST00000505522 NPAS4Q8IUM7 802 aa13.88□□□□□ -0.19
SNHG4-202ENST00000505522 KIAA0319LQ8IZA0 1049 aa13.88□□□□□ -0.19
SNHG4-202ENST00000505522 GJD3Q8N144 294 aa13.88□□□□□ -0.19
SNHG4-202ENST00000505522 ATP8B4Q8TF62 1192 aa13.88□□□□□ -0.19
SNHG4-202ENST00000505522 PHKBQ93100 1093 aa13.88□□□□□ -0.19
SNHG4-202ENST00000505522 ZNF577Q9BSK1 485 aa13.88□□□□□ -0.19
SNHG4-202ENST00000505522 LMAN2LQ9H0V9 348 aa13.88□□□□□ -0.19
SNHG4-202ENST00000505522 CDHR5Q9HBB8 845 aa13.88□□□□□ -0.19
SNHG4-202ENST00000505522 ALG13Q9NP73 1137 aaKnown RBP13.88□□□□□ -0.19
SNHG4-202ENST00000505522 C11orf16Q9NQ32 467 aa13.88□□□□□ -0.19
SNHG4-202ENST00000505522 ZNF302Q9NR11 478 aa13.88□□□□□ -0.19
SNHG4-202ENST00000505522 CLDND1Q9NY35 253 aa13.88□□□□□ -0.19
SNHG4-202ENST00000505522 KIAA1671Q9BY89 1806 aa13.87□□□□□ -0.19
SNHG4-202ENST00000505522 PI4K2BG5E9Z4 385 aa13.87□□□□□ -0.19
SNHG4-202ENST00000505522 RPS6KB1P23443 525 aa13.87□□□□□ -0.19
SNHG4-202ENST00000505522 HSPA4P34932 840 aa13.87□□□□□ -0.19
SNHG4-202ENST00000505522 HYAL1Q12794 435 aa13.87□□□□□ -0.19
SNHG4-202ENST00000505522 CAMK1Q14012 370 aa13.87□□□□□ -0.19
SNHG4-202ENST00000505522 NTRK3Q16288 839 aa13.87□□□□□ -0.19
SNHG4-202ENST00000505522 PUS10Q3MIT2 529 aaKnown RBP13.87□□□□□ -0.19
SNHG4-202ENST00000505522 PAN2Q504Q3 1202 aaKnown RBP13.87□□□□□ -0.19
SNHG4-202ENST00000505522 BLOC1S2Q6QNY1 142 aa13.87□□□□□ -0.19
SNHG4-202ENST00000505522 CMTR2Q8IYT2 770 aaKnown RBP13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms